Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 1.2e-180 636.3 324 100.0
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 1.2e-180 636.3 324 100.0
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 1.5e-178 629.4 324 98.5
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 3.8e-177 624.8 325 98.2
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 3.2e-176 621.7 325 97.8
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 2.1e-156 555.8 302 92.4
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 3.1e-155 552.0 302 92.1
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 3.1e-155 552.0 302 92.1
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 2.6e-154 548.9 302 92.1
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 7.6e-154 547.4 302 91.7
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 9.9e-154 547.0 302 91.7
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 7.9e-151 537.3 301 90.4
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 1.0e-145 520.4 305 86.2
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 2.1e-143 512.7 305 85.2
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 3.5e-143 511.9 302 87.4
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 7.9e-143 510.8 306 84.0
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 3.9e-142 508.4 306 84.0
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 4.5e-138 495.0 309 86.1
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 5.9e-130 468.0 293 81.9
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 1.8e-118 429.9 307 72.0
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 6.8e-110 401.4 296 71.3
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 1.5e-109 400.2 304 71.1
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 1.6e-106 390.2 298 69.5
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 7.7e-106 387.9 305 67.2
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 1.0e-105 387.5 286 69.9
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 1.7e-105 386.7 310 65.8
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 8.5e-105 384.4 308 66.6
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 2.5e-104 382.9 303 66.0
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 3.2e-104 382.5 301 67.8
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 4.2e-104 382.1 249 75.9
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 5.5e-104 381.7 249 75.9
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 7.2e-104 381.3 281 69.0
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 9.4e-104 380.9 303 65.7
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 1.2e-103 380.6 303 65.7
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 1.6e-103 380.2 307 67.1
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 2.1e-103 379.8 299 67.6
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 2.7e-103 379.4 280 70.0
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 2.7e-103 379.4 307 66.1
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 3.6e-103 379.0 301 66.8
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 3.6e-103 379.0 310 64.8
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 6.1e-103 378.3 245 76.3
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 8.0e-103 377.9 301 65.4
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 1.0e-102 377.5 286 67.8
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 1.0e-102 377.5 302 66.2
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 1.4e-102 377.1 239 76.2
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 1.4e-102 377.1 306 65.7
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 2.3e-102 376.3 307 65.5
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 3.0e-102 375.9 253 73.5
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 4.0e-102 375.6 309 64.7
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 5.2e-102 375.2 249 74.3
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 8.8e-102 374.4 301 66.1
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 1.2e-101 374.0 290 66.2
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 1.5e-101 373.6 269 72.1
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 2.0e-101 373.2 302 65.2
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 2.6e-101 372.9 302 64.9
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 2.6e-101 372.9 296 66.6
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 2.6e-101 372.9 251 74.5
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 3.4e-101 372.5 305 66.2
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 4.4e-101 372.1 301 67.1
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 1.3e-100 370.5 275 70.2
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 1.3e-100 370.5 240 76.2
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 1.7e-100 370.2 248 74.2
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 2.8e-100 369.4 307 64.8
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 2.8e-100 369.4 288 67.4
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 3.7e-100 369.0 315 63.2
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 4.8e-100 368.6 304 64.5
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 4.8e-100 368.6 285 67.7
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 6.3e-100 368.2 297 66.0
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 1.4e-99 367.1 301 64.8
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 1.8e-99 366.7 308 64.6
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 3.5e-98 362.5 305 62.3
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 4.5e-98 362.1 240 74.6
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 5.9e-98 361.7 321 60.1
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 5.9e-98 361.7 245 73.5
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 1.0e-97 360.9 305 63.9
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 2.3e-97 359.8 245 73.1
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 3.8e-97 359.0 304 63.5
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 3.8e-97 359.0 246 72.0
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 1.9e-96 356.7 245 72.7
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 4.2e-96 355.5 301 62.5
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 9.5e-96 354.4 313 61.7
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 2.8e-95 352.8 244 72.5
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 2.8e-95 352.8 271 66.8
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 3.6e-95 352.4 249 70.7
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 4.7e-95 352.1 247 69.6
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 1.8e-94 350.1 248 70.2
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 2.3e-94 349.7 249 70.7
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 2.2e-92 343.2 223 76.2
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 2.8e-92 342.8 265 64.5
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 9.2e-91 337.8 240 71.2
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 2.9e-89 332.8 213 76.5
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 1.9e-88 330.1 259 62.5
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 5.6e-88 328.6 242 68.6
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 1.6e-87 327.0 219 74.9
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 6.1e-87 325.1 263 66.2
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 1.4e-86 323.9 228 72.4
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 5.4e-83 312.0 248 67.3
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 4.6e-82 308.9 255 62.0
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 2.1e-79 300.1 252 66.3
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 3.6e-79 299.3 246 62.2
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 1.1e-78 297.7 314 56.1
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 1.4e-78 297.4 239 65.7
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 1.4e-78 297.4 252 65.5
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 3.1e-78 296.2 251 64.9
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 7.5e-77 291.6 213 69.5
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 7.1e-75 285.0 244 64.8
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 2.1e-71 273.5 240 59.2
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 1.2e-69 267.7 220 65.0
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 3.4e-69 266.2 182 74.7
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 3.3e-64 249.6 314 48.7
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 2.6e-61 240.0 179 69.8
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 7.6e-61 238.4 244 54.5
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 4.3e-56 222.6 292 45.2
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 9.6e-48 194.9 129 75.2
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 7.1e-43 178.7 117 71.8
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 1.3e-36 157.9 115 67.0
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 1.9e-32 144.1 112 64.3
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 7.6e-29 132.1 95 64.2
Hma1.2p1_0161F.1_g071660 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 2.7e-26 123.6 82 72.0
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.1e-22 111.7 85 65.9
BcaB06g26875 Brassica carinata HOM05D006330 ORTHO05D008013 2.4e-22 110.5 64 92.2
CDE04G0367 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 6.9e-22 109.0 85 62.4
VMungo1383G2211 Vigna mungo HOM05D006330 ORTHO05D434633 1.4e-09 68.2 48 66.7
RcHm_v2.0_Chr5g0065021 Rosa chinensis HOM05D006330 ORTHO05D008013 4.1e-06 56.6 46 60.9


User provided reference genes

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