Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p04940 Brassica napus HOM05D001875 ORTHO05D013246 5.1e-27 123.6 61 100.0
A03p37190 Brassica napus HOM05D001875 ORTHO05D013246 3.2e-21 104.4 61 85.2
A07p09700 Brassica napus HOM05D001875 ORTHO05D013246 3.2e-21 104.4 61 85.2
A10p07880 Brassica napus HOM05D001875 ORTHO05D013246 3.2e-21 104.4 61 85.2
BcaC02g10547 Brassica carinata HOM05D001875 ORTHO05D013246 4.3e-18 94.0 60 78.3
BolC4t24306H Brassica oleracea HOM05D001875 ORTHO05D013246 4.3e-18 94.0 60 78.3
A01p34690 Brassica napus HOM05D001875 ORTHO05D013246 2.2e-17 91.7 60 75.0
A08p09420 Brassica napus HOM05D001875 ORTHO05D013246 2.2e-17 91.7 60 75.0
BraA08t32941Z Brassica rapa HOM05D001875 ORTHO05D013246 2.2e-17 91.7 60 75.0
C03p38700 Brassica napus HOM05D012973 ORTHO05D016770 1.4e-13 79.0 44 86.4
BcaC05g27999 Brassica carinata HOM05D012973 ORTHO05D016770 4.2e-13 77.4 43 86.0
Sp6g27000 Schrenkiella parvula HOM05D001875 ORTHO05D002019 7.9e-12 73.2 50 72.0
BolC9t55055H Brassica oleracea HOM05D012973 ORTHO05D013246 1.0e-11 72.8 44 79.5
Thhalv10013608m.g Eutrema salsugineum HOM05D001875 ORTHO05D002019 1.8e-11 72.0 44 79.5
BcaB01g05215 Brassica carinata HOM05D001875 ORTHO05D002019 5.1e-11 70.5 51 70.6
A10p22160 Brassica napus HOM05D001875 ORTHO05D002019 8.8e-11 69.7 51 72.5
C03p09530 Brassica napus HOM05D001875 ORTHO05D002019 8.8e-11 69.7 51 72.5
BraA10t44275Z Brassica rapa HOM05D001875 ORTHO05D002019 8.8e-11 69.7 51 72.5
BcaC01g01843 Brassica carinata HOM05D012973 ORTHO05D013246 1.1e-10 69.3 76 55.3
CARHR195980 Cardamine hirsuta HOM05D001875 ORTHO05D002019 1.1e-10 69.3 50 66.0
BraA03t10143Z Brassica rapa HOM05D001875 ORTHO05D002019 2.0e-10 68.6 45 80.0
BcaB08g36796 Brassica carinata HOM05D001875 ORTHO05D002019 2.6e-10 68.2 52 69.2
C09p59950 Brassica napus HOM05D001875 ORTHO05D002019 2.6e-10 68.2 51 70.6
BolC9t58831H Brassica oleracea HOM05D001875 ORTHO05D002019 2.6e-10 68.2 51 70.6
AL6G28280 Arabidopsis lyrata HOM05D001875 ORTHO05D002019 4.4e-10 67.4 50 66.0
AT5G17230 Arabidopsis thaliana HOM05D001875 ORTHO05D002019 4.4e-10 67.4 50 66.0
BcaNung00411 Brassica carinata HOM05D001875 ORTHO05D002019 4.4e-10 67.4 51 68.6
Carub.0006s1542 Capsella rubella HOM05D001875 ORTHO05D002019 4.4e-10 67.4 50 66.0
A03p08230 Brassica napus HOM05D001875 ORTHO05D002019 7.4e-10 66.6 45 77.8
BcaC04g18818 Brassica carinata HOM05D001875 ORTHO05D002019 9.7e-10 66.2 51 68.6
BolC3t13448H Brassica oleracea HOM05D001875 ORTHO05D002019 1.7e-09 65.5 51 68.6
BcaB01g04948 Brassica carinata HOM05D001875 ORTHO05D002019 4.1e-08 60.8 51 68.6
Aa31LG11G12440 Aethionema arabicum HOM05D001875 ORTHO05D002019 1.2e-07 59.3 51 58.8
BraA02t05366Z Brassica rapa HOM05D001875 ORTHO05D002019 1.5e-07 58.9 65 55.4
A02p04030 Brassica napus HOM05D001875 ORTHO05D002019 2.6e-07 58.2 42 73.8
BcaC03g18541 Brassica carinata HOM05D001875 ORTHO05D002019 3.4e-07 57.8 65 53.8
C02p08870 Brassica napus HOM05D001875 ORTHO05D002019 3.4e-07 57.8 65 53.8
BolC2t06796H Brassica oleracea HOM05D001875 ORTHO05D002019 3.4e-07 57.8 65 53.8
BolC3t19429H Brassica oleracea HOM05D012973 ORTHO05D013246 3.4e-07 57.8 38 81.6
Cpa.g.c43305 Carica papaya HOM05D001875 ORTHO05D013246 1.3e-06 55.8 50 58.0
ClCG01G008470 Citrullus lanatus HOM05D001875 ORTHO05D002019 2.2e-06 55.1 43 69.8
MELO3C025102.2 Cucumis melo HOM05D001875 ORTHO05D002019 2.2e-06 55.1 43 69.8
CsaV3_5G020340 Cucumis sativus L. HOM05D001875 ORTHO05D002019 2.2e-06 55.1 43 69.8
SalBow5G1991 Salvia bowleyana HOM05D001875 ORTHO05D002019 2.2e-06 55.1 56 53.6
SalBow5G5378 Salvia bowleyana HOM05D001875 ORTHO05D002019 2.2e-06 55.1 56 53.6
Manes.01G124200 Manihot esculenta HOM05D001875 ORTHO05D002019 3.8e-06 54.3 43 67.4
FvH4_1g27480 Fragaria vesca HOM05D001875 ORTHO05D002019 6.5e-06 53.5 50 54.0
FAN19G0822 Fragaria x ananassa HOM05D001875 ORTHO05D002019 6.5e-06 53.5 50 54.0
Thecc.04G058700 Theobroma cacao HOM05D001875 ORTHO05D002019 6.5e-06 53.5 42 69.0
CAN.G404.3 Capsicum annuum HOM05D001875 ORTHO05D002019 8.5e-06 53.1 43 65.1
FAN26G2178 Fragaria x ananassa HOM05D001875 ORTHO05D002019 8.5e-06 53.1 50 54.0
Oeu012518.1 Olea europaea HOM05D001875 ORTHO05D002019 8.5e-06 53.1 43 67.4
PSO017G0696 Papaver somniferum HOM05D001875 ORTHO05D002019 8.5e-06 53.1 48 60.4
PSO478G3034 Papaver somniferum HOM05D001875 ORTHO05D002019 8.5e-06 53.1 48 60.4
RcHm_v2.0_Chr3g0488531 Rosa chinensis HOM05D001875 ORTHO05D002019 8.5e-06 53.1 50 54.0


User provided reference genes

Program Settings