Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p02600 Brassica napus HOM05D000811 ORTHO05D004743 3.1e-60 235.0 120 100.0
Aa31LG8G15220 Aethionema arabicum HOM05D000811 ORTHO05D004743 1.8e-36 156.0 83 94.0
BraA07t28059Z Brassica rapa HOM05D000811 ORTHO05D004743 1.8e-36 156.0 81 98.8
BcaC06g36361 Brassica carinata HOM05D000811 ORTHO05D004743 1.5e-35 152.9 81 96.3
C07p04900 Brassica napus HOM05D000811 ORTHO05D004743 1.5e-35 152.9 81 96.3
BolC7t40891H Brassica oleracea HOM05D000811 ORTHO05D004743 1.5e-35 152.9 81 96.3
BcaB08g34786 Brassica carinata HOM05D000811 ORTHO05D004743 3.5e-35 151.8 81 93.8
BraA06t26271Z Brassica rapa HOM05D000811 ORTHO05D004743 3.5e-35 151.8 81 93.8
Thhalv10022913m.g Eutrema salsugineum HOM05D000811 ORTHO05D004743 3.5e-35 151.8 81 93.8
C06p13450 Brassica napus HOM05D000811 ORTHO05D004743 5.9e-35 151.0 81 93.8
A06p33380 Brassica napus HOM05D000811 ORTHO05D004743 7.7e-35 150.6 81 92.6
CARHR108530 Cardamine hirsuta HOM05D000811 ORTHO05D004743 1.0e-34 150.2 81 92.6
Sp3g31470 Schrenkiella parvula HOM05D000811 ORTHO05D004743 1.0e-34 150.2 81 92.6
AT2G18040 Arabidopsis thaliana HOM05D000811 ORTHO05D004743 1.7e-34 149.4 81 91.4
BcaB03g16590 Brassica carinata HOM05D000811 ORTHO05D004743 1.7e-34 149.4 81 92.6
AL3G51190 Arabidopsis lyrata HOM05D000811 ORTHO05D004743 2.2e-34 149.1 81 91.4
BolC6t36506H Brassica oleracea HOM05D000811 ORTHO05D004743 2.9e-34 148.7 81 92.6
Carub.0003s3219 Capsella rubella HOM05D000811 ORTHO05D004743 2.9e-34 148.7 81 92.6
C03p58940 Brassica napus HOM05D000811 ORTHO05D004743 1.1e-33 146.7 81 90.1
BolC3t18151H Brassica oleracea HOM05D000811 ORTHO05D004743 1.1e-33 146.7 81 90.1
THA.LOC104819758 Tarenaya hassleriana HOM05D000811 ORTHO05D004743 5.5e-33 144.4 81 87.7
THA.LOC104807488 Tarenaya hassleriana HOM05D000811 ORTHO05D004743 1.2e-32 143.3 81 86.4
AUR62043613 Chenopodium quinoa HOM05D000811 ORTHO05D004743 5.2e-31 137.9 81 79.0
AUR62044455 Chenopodium quinoa HOM05D000811 ORTHO05D004743 5.2e-31 137.9 81 79.0
ECA246G0760 Erigeron canadensis HOM05D000811 ORTHO05D004743 7.4e-30 134.0 90 73.3
Ah.03g141760 Amaranthus hybridus HOM05D000811 ORTHO05D004743 1.3e-29 133.3 81 76.5
EL10As8g23839 Beta vulgaris HOM05D000811 ORTHO05D004743 1.3e-29 133.3 81 77.8
Lsat_1_v5_gn_3_74081 Lactuca sativa HOM05D000811 ORTHO05D004743 1.7e-29 132.9 89 73.0
PGR102G1785 Punica granatum HOM05D000811 ORTHO05D004743 1.7e-29 132.9 81 80.2
Lj4g0014424 Lotus japonicus HOM05D000811 ORTHO05D004743 2.8e-29 132.1 80 81.2
Hund16485 Selenicereus undatus HOM05D000811 ORTHO05D004743 2.8e-29 132.1 81 77.8
Sc16g0002050 Simmondsia chinensis HOM05D000811 ORTHO05D004743 3.7e-29 131.7 81 76.5
FAN14G0683 Fragaria x ananassa HOM05D000811 ORTHO05D004743 4.8e-29 131.3 90 73.3
Hund14039 Selenicereus undatus HOM05D000811 ORTHO05D004743 4.8e-29 131.3 81 76.5
Cpa.g.sc6.231 Carica papaya HOM05D000811 ORTHO05D004743 1.1e-28 130.2 81 77.8
CSS0015066 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D004743 1.4e-28 129.8 79 81.0
CSS0031839 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D004743 1.4e-28 129.8 79 81.0
Ciclev10026785m.g Citrus clementina HOM05D000811 ORTHO05D004743 1.4e-28 129.8 81 77.8
Lj4A217G58 Lonicera japonica HOM05D000811 ORTHO05D004743 1.4e-28 129.8 89 71.9
CSS0030860 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D004743 2.4e-28 129.0 80 77.5
QL06p033570 Quercus lobata HOM05D000811 ORTHO05D004743 2.4e-28 129.0 80 77.5
TAR381G1630 Trochodendron aralioides HOM05D000811 ORTHO05D004743 2.4e-28 129.0 79 78.5
Dinv41989 Davidia involucrata HOM05D000586 ORTHO05D003356 3.1e-28 128.6 77 81.8
FvH4_6g24550 Fragaria vesca HOM05D000811 ORTHO05D004743 3.1e-28 128.6 81 79.0
FAN02G2932 Fragaria x ananassa HOM05D000811 ORTHO05D004743 3.1e-28 128.6 81 79.0
Oeu060412.1 Olea europaea HOM05D000811 ORTHO05D004743 3.1e-28 128.6 81 74.1
Cfa006960 Carpinus fangiana HOM05D000811 ORTHO05D007840 4.1e-28 128.3 80 76.2
Lsat_1_v5_gn_2_78761 Lactuca sativa HOM05D000811 ORTHO05D004743 4.1e-28 128.3 80 76.2
HanXRQChr14g0441311 Helianthus annuus HOM05D000811 ORTHO05D004743 5.3e-28 127.9 80 75.0
SGA_v2.0_scaffold32G13256 Striga asiatica HOM05D000811 ORTHO05D004743 5.3e-28 127.9 81 76.5
TAR625G0006 Trochodendron aralioides HOM05D000811 ORTHO05D004743 5.3e-28 127.9 79 78.5
FAN09G3320 Fragaria x ananassa HOM05D000811 ORTHO05D004743 7.0e-28 127.5 81 77.8
Nn5g29274 Nelumbo nucifera HOM05D000811 ORTHO05D004743 7.0e-28 127.5 86 73.3
Potri.007G013400 Populus trichocarpa HOM05D000811 ORTHO05D004743 7.0e-28 127.5 114 62.3
TWI09G0609 Tripterygium wilfordii HOM05D000811 ORTHO05D004743 7.0e-28 127.5 81 75.3
Aqoxy5G01449 Aquilegia oxysepala HOM05D000811 ORTHO05D004743 9.1e-28 127.1 79 75.9
Dinv23445 Davidia involucrata HOM05D000586 ORTHO05D003356 9.1e-28 127.1 77 79.2
ECA238G1572 Erigeron canadensis HOM05D000811 ORTHO05D004743 9.1e-28 127.1 80 76.2
Manes.02G103000 Manihot esculenta HOM05D000811 ORTHO05D004743 9.1e-28 127.1 81 75.3
CiPaw.08G132800 Carya illinoinensis HOM05D000811 ORTHO05D004743 1.2e-27 126.7 80 76.2
MD04G1047200 Malus domestica HOM05D000811 ORTHO05D004743 1.2e-27 126.7 86 70.9
Rhsim08G0034300 Rhododendron simsii HOM05D000811 ORTHO05D007840 1.2e-27 126.7 80 77.5
TAR628G0680 Trochodendron aralioides HOM05D000811 ORTHO05D004743 1.2e-27 126.7 79 77.2
Dinv33618 Davidia involucrata HOM05D000811 ORTHO05D004743 1.6e-27 126.3 79 78.5
FAN05G0499 Fragaria x ananassa HOM05D000811 ORTHO05D004743 1.6e-27 126.3 81 77.8
COL.COLO4_21930 Corchorus olitorius HOM05D000811 ORTHO05D004743 2.0e-27 125.9 79 77.2
RcHm_v2.0_Chr3g0483651 Rosa chinensis HOM05D000811 ORTHO05D004743 2.0e-27 125.9 81 77.8
Eucgr.J02408 Eucalyptus grandis HOM05D000811 ORTHO05D004743 2.6e-27 125.6 76 78.9
HanXRQChr15g0482841 Helianthus annuus HOM05D000811 ORTHO05D004743 2.6e-27 125.6 89 69.7
Sabra07G0010400 Salix brachista HOM05D000811 ORTHO05D004743 2.6e-27 125.6 79 78.5
vmacro18420 Vaccinium macrocarpon HOM05D000811 ORTHO05D004743 2.6e-27 125.6 80 77.5
Actinidia31003 Actinidia chinensis HOM05D000811 ORTHO05D004743 3.5e-27 125.2 77 79.2
Hma1.2p1_0258F.1_g104200 Hydrangea macrophylla HOM05D000811 ORTHO05D004743 3.5e-27 125.2 79 75.9
Nn6g32304 Nelumbo nucifera HOM05D000811 ORTHO05D004743 3.5e-27 125.2 77 79.2
Nitab4.5_0001133g0070 Nicotiana tabacum HOM05D000811 ORTHO05D004743 3.5e-27 125.2 80 78.8
SGA_v2.0_scaffold58G20433 Striga asiatica HOM05D000811 ORTHO05D004743 3.5e-27 125.2 81 75.3
TAR376G0878 Trochodendron aralioides HOM05D000811 ORTHO05D004743 3.5e-27 125.2 79 75.9
Dinv40074 Davidia involucrata HOM05D000811 ORTHO05D004743 4.5e-27 124.8 79 75.9
Haze_03791 Corylus avellana HOM05D000811 ORTHO05D004743 5.9e-27 124.4 80 73.8
Duzib264G0600 Durio zibethinus HOM05D000811 ORTHO05D004743 5.9e-27 124.4 80 73.8
VMungo0289G0001 Vigna mungo HOM05D000811 ORTHO05D004743 5.9e-27 124.4 76 76.3
arahy.Tifrunner.gnm1.ann1.66CB8L Arachis hypogaea HOM05D000811 ORTHO05D004743 7.7e-27 124.0 76 76.3
Cc07_g10610 Coffea canephora HOM05D000811 ORTHO05D004743 7.7e-27 124.0 80 76.2
Glyma.16G129900 Glycine max HOM05D000811 ORTHO05D004743 7.7e-27 124.0 76 76.3
Thecc.01G020900 Theobroma cacao HOM05D000811 ORTHO05D004743 7.7e-27 124.0 80 73.8
ATR0147G012 Amborella trichopoda HOM05D000811 ORTHO05D004743 1.0e-26 123.6 85 68.2
Glyma.02G049500 Glycine max HOM05D000811 ORTHO05D004743 1.0e-26 123.6 76 76.3
Gohir.D11G044800 Gossypium hirsutum HOM05D000811 ORTHO05D004743 1.0e-26 123.6 80 75.0
Lalb_Chr16g0391191 Lupinus albus HOM05D000811 ORTHO05D004743 1.0e-26 123.6 80 76.2
Phvul.003G260800 Phaseolus vulgaris HOM05D000811 ORTHO05D004743 1.0e-26 123.6 76 75.0
Solyc01g110530.3 Solanum lycopersicum HOM05D000811 ORTHO05D004743 1.0e-26 123.6 77 75.3
Sopen01g052660 Solanum pennellii HOM05D000811 ORTHO05D004743 1.0e-26 123.6 77 75.3
PGSC0003DMG400001617 Solanum tuberosum HOM05D000811 ORTHO05D004743 1.0e-26 123.6 77 75.3
arahy.Tifrunner.gnm1.ann1.LCWP3I Arachis hypogaea HOM05D000811 ORTHO05D004743 1.3e-26 123.2 76 76.3
MELO3C016378.2 Cucumis melo HOM05D000811 ORTHO05D004743 1.3e-26 123.2 76 77.6
MD08G1077500 Malus domestica HOM05D000811 ORTHO05D004743 1.3e-26 123.2 89 66.3
CiPaw.07G057300 Carya illinoinensis HOM05D000811 ORTHO05D004743 1.7e-26 122.9 80 73.8
Oeu062504.1 Olea europaea HOM05D000811 ORTHO05D004743 1.7e-26 122.9 80 76.2
TWI53G1676 Tripterygium wilfordii HOM05D000811 ORTHO05D004743 1.7e-26 122.9 81 74.1
MSTRG.5435 Avicennia marina HOM05D000811 ORTHO05D004743 2.2e-26 122.5 81 71.6
CsaV3_4G005720 Cucumis sativus L. HOM05D000811 ORTHO05D004743 2.2e-26 122.5 76 77.6
Lalb_Chr05g0229881 Lupinus albus HOM05D000811 ORTHO05D004743 2.2e-26 122.5 79 74.7
Nitab4.5_0006862g0010 Nicotiana tabacum HOM05D000811 ORTHO05D004743 2.2e-26 122.5 80 76.2
Gorai.007G048100 Gossypium raimondii HOM05D000811 ORTHO05D004743 2.9e-26 122.1 80 75.0
Manes.01G144800 Manihot esculenta HOM05D000811 ORTHO05D004743 2.9e-26 122.1 81 72.8
Peaxi162Scf00799g00517 Petunia axillaris HOM05D000811 ORTHO05D004743 2.9e-26 122.1 80 76.2
Prupe.1G202600 Prunus persica HOM05D000811 ORTHO05D004743 2.9e-26 122.1 80 72.5
HPP92_003523 Vanilla planifolia HOM05D000811 ORTHO05D004743 2.9e-26 122.1 93 62.4
CAN.G1329.5 Capsicum annuum HOM05D000811 ORTHO05D004743 3.8e-26 121.7 111 58.6
Duzib187G1507 Durio zibethinus HOM05D000811 ORTHO05D004743 3.8e-26 121.7 80 72.5
Solyc02g062250.3 Solanum lycopersicum HOM05D000811 ORTHO05D004743 3.8e-26 121.7 77 79.2
PGSC0003DMG400019933 Solanum tuberosum HOM05D000811 ORTHO05D004743 3.8e-26 121.7 77 79.2
TPR.G30057 Trifolium pratense HOM05D000811 ORTHO05D004743 3.8e-26 121.7 76 77.6
ClCG07G008440 Citrullus lanatus HOM05D000811 ORTHO05D004743 5.0e-26 121.3 76 75.0
HanXRQChr11g0327321 Helianthus annuus HOM05D000811 ORTHO05D004743 5.0e-26 121.3 91 65.9
Oeu035303.1 Olea europaea HOM05D000811 ORTHO05D004743 5.0e-26 121.3 80 75.0
Actinidia27847 Actinidia chinensis HOM05D000811 ORTHO05D004743 6.5e-26 120.9 76 76.3
arahy.Tifrunner.gnm1.ann1.T1352T Arachis hypogaea HOM05D000811 ORTHO05D004743 6.5e-26 120.9 76 75.0
GSVIVG01018801001 Vitis vinifera HOM05D000811 ORTHO05D004743 6.5e-26 120.9 79 72.2
Duzib147G0350 Durio zibethinus HOM05D000811 ORTHO05D004743 8.5e-26 120.6 80 72.5
Gohir.A10G097900 Gossypium hirsutum HOM05D000811 ORTHO05D004743 8.5e-26 120.6 80 75.0
Gohir.D10G090300 Gossypium hirsutum HOM05D000811 ORTHO05D004743 8.5e-26 120.6 80 75.0
Gorai.011G099300 Gossypium raimondii HOM05D000811 ORTHO05D004743 8.5e-26 120.6 80 75.0
DCAR_016616 Daucus carota HOM05D000811 ORTHO05D004743 1.9e-25 119.4 77 74.0
Migut.B00125 Erythranthe guttata HOM05D000811 ORTHO05D004743 1.9e-25 119.4 81 70.4
Peaxi162Scf00362g01151 Petunia axillaris HOM05D000811 ORTHO05D004743 1.9e-25 119.4 74 75.7
Sopen02g013220 Solanum pennellii HOM05D000811 ORTHO05D004743 1.9e-25 119.4 77 77.9
CDE05G3463 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 3.2e-25 118.6 85 64.7
Sed0024520 Sechium edule HOM05D000811 ORTHO05D004743 3.2e-25 118.6 76 75.0
Gohir.A11G041500 Gossypium hirsutum HOM05D000811 ORTHO05D004743 4.2e-25 118.2 78 73.1
Sed0008902 Sechium edule HOM05D000811 ORTHO05D004743 4.2e-25 118.2 76 73.7
Medtr8g076070 Medicago truncatula HOM05D000811 ORTHO05D004743 5.5e-25 117.9 76 76.3
Psat4g098480 Pisum sativum HOM05D000811 ORTHO05D004743 5.5e-25 117.9 85 67.1
CDE09G0022 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 7.2e-25 117.5 77 68.8
Migut.H01149 Erythranthe guttata HOM05D000811 ORTHO05D004743 7.2e-25 117.5 81 71.6
Rhsim05G0067500 Rhododendron simsii HOM05D000811 ORTHO05D004743 7.2e-25 117.5 76 73.7
vmacro17410 Vaccinium macrocarpon HOM05D000811 ORTHO05D004743 1.2e-24 116.7 93 62.4
CAN.G1365.1 Capsicum annuum HOM05D000811 ORTHO05D004743 3.6e-24 115.2 77 72.7
Ca_22371_v3 Cicer arietinum L. HOM05D000811 ORTHO05D004743 3.6e-24 115.2 76 72.4
Pp3c20_23120 Physcomitrium patens HOM05D000811 ORTHO05D004743 4.7e-24 114.8 90 61.1
CDE02G4615 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 6.1e-24 114.4 77 67.5
CDE05G3063 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 1.0e-23 113.6 75 69.3
unitig_0.g45 Utricularia gibba HOM05D000628 ORTHO05D001121 1.0e-23 113.6 75 72.0
PSO210G3301 Papaver somniferum HOM05D000811 ORTHO05D004743 2.3e-23 112.5 82 69.5
SalBow3G3608 Salvia bowleyana HOM05D000811 ORTHO05D004743 3.0e-23 112.1 81 66.7
arahy.Tifrunner.gnm1.ann1.9YI44J Arachis hypogaea HOM05D007334 ORTHO05D004743 5.2e-23 111.3 78 69.2
MSTRG.2701 Avicennia marina HOM05D000811 ORTHO05D004743 5.2e-23 111.3 81 65.4
Actinidia22989 Actinidia chinensis HOM05D000811 ORTHO05D004743 1.2e-22 110.2 70 74.3
SMO146G0274 Selaginella moellendorffii HOM05D000811 ORTHO05D004743 2.0e-22 109.4 88 60.2
HPP92_002102 Vanilla planifolia HOM05D000811 ORTHO05D004743 2.0e-22 109.4 80 63.8
Os04g0118500 Oryza sativa ssp. japonica HOM05D000811 ORTHO05D004743 3.3e-22 108.6 77 67.5
Zm00001eb419950 Zea mays HOM05D000811 ORTHO05D004743 3.3e-22 108.6 77 67.5
MBI07_g03816_MAGBIO Magnolia biondii HOM05D000811 ORTHO05D004743 4.4e-22 108.2 75 68.0
Pp3c10_25090 Physcomitrium patens HOM05D000811 ORTHO05D004743 1.7e-21 106.3 90 56.7
unitig_699.g19711 Utricularia gibba HOM05D000811 ORTHO05D004743 2.2e-21 105.9 80 63.8
Zm00001eb067280 Zea mays HOM05D000811 ORTHO05D004743 2.8e-21 105.5 80 63.8
MBI04_g40115_MAGBIO Magnolia biondii HOM05D000811 ORTHO05D004743 1.4e-20 103.2 73 67.1
Ah.02g124500 Amaranthus hybridus HOM05D000811 ORTHO05D004743 5.3e-20 101.3 62 75.8
MCO04G419 Micromonas commoda HOM05D000811 ORTHO05D004743 7.0e-20 100.9 76 61.8
SEGI_07022 Sequoiadendron giganteum HOM05D000811 ORTHO05D004743 9.1e-20 100.5 79 58.2
AagrBONN_evm.TU.Sc2ySwM_228.1572 Anthoceros agrestis HOM05D000811 ORTHO05D004743 2.7e-19 99.0 88 53.4
arahy.Tifrunner.gnm1.ann1.6S1J49 Arachis hypogaea HOM05D004782 ORTHO05D005498 2.7e-19 99.0 74 64.9
CBR_g552 Chara braunii HOM05D000811 ORTHO05D004743 4.5e-19 98.2 76 60.5
MBI05_g26504_MAGBIO Magnolia biondii HOM05D000811 ORTHO05D004743 4.5e-19 98.2 100 55.0
Nitab4.5_0010885g0050 Nicotiana tabacum HOM05D000811 ORTHO05D004743 1.3e-18 96.7 74 62.2
Atru.chr3.785 Acer truncatum HOM05D000811 ORTHO05D004743 4.2e-17 91.7 58 75.9
arahy.Tifrunner.gnm1.ann1.0S2HJN Arachis hypogaea HOM05D007334 ORTHO05D004743 2.4e-12 75.9 85 51.8
PSO170G2420 Papaver somniferum HOM05D000811 ORTHO05D004743 1.2e-11 73.6 56 64.3
Haze_26720 Corylus avellana HOM05D000811 ORTHO05D004743 1.6e-11 73.2 85 44.7
Cre16.g671900 Chlamydomonas reinhardtii HOM05D000811 ORTHO05D004743 4.5e-11 71.6 76 46.1
PRCOL_00002510 Prasinoderma coloniale HOM05D009714 ORTHO05D004743 4.5e-11 71.6 110 40.9
Actinidia00122 Actinidia chinensis HOM05D000811 ORTHO05D004743 1.7e-10 69.7 44 72.7
Actinidia20649 Actinidia chinensis HOM05D000811 ORTHO05D004743 1.7e-10 69.7 44 72.7
HPP92_026047 Vanilla planifolia HOM05D004902 ORTHO05D006603 5.2e-07 58.2 76 43.4
Nitab4.5_0002096g0060 Nicotiana tabacum HOM05D000811 ORTHO05D004743 8.9e-07 57.4 29 86.2


User provided reference genes

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