Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p02330 Brassica napus HOM05D006028 ORTHO05D007784 1.9e-212 742.3 380 100.0
BraA07t28024Z Brassica rapa HOM05D006028 ORTHO05D007784 2.7e-211 738.4 380 99.2
C07p04450 Brassica napus HOM05D006028 ORTHO05D007784 3.6e-203 711.4 380 95.5
BolC7t40839H Brassica oleracea HOM05D006028 ORTHO05D007784 1.8e-202 709.1 380 95.3
BcaC06g36407 Brassica carinata HOM05D006028 ORTHO05D007784 6.3e-200 700.7 380 94.7
Thhalv10022737m.g Eutrema salsugineum HOM05D006028 ORTHO05D007784 8.3e-192 673.7 380 91.3
Sp3g31820 Schrenkiella parvula HOM05D006028 ORTHO05D007784 3.1e-191 671.8 380 91.3
SpUn0030_0010 Schrenkiella parvula HOM05D006028 ORTHO05D007784 3.1e-191 671.8 380 91.3
BcaB03g16641 Brassica carinata HOM05D006028 ORTHO05D007784 2.0e-190 669.1 404 87.1
AT2G18410 Arabidopsis thaliana HOM05D006028 ORTHO05D007784 1.5e-185 652.9 380 88.4
Carub.0003s3256 Capsella rubella HOM05D006028 ORTHO05D007784 1.7e-184 649.4 380 87.9
AL3G51690 Arabidopsis lyrata HOM05D006028 ORTHO05D007784 5.4e-183 644.4 380 86.3
CARHR109010 Cardamine hirsuta HOM05D006028 ORTHO05D007784 9.8e-177 623.6 381 85.0
Aa31LG8G15620 Aethionema arabicum HOM05D006028 ORTHO05D007784 5.8e-161 571.2 381 77.4
THA.LOC104820944 Tarenaya hassleriana HOM05D006028 ORTHO05D007784 2.7e-150 535.8 380 73.9
Cfa007919 Carpinus fangiana HOM05D006028 ORTHO05D007784 1.7e-112 410.2 385 57.9
Potri.004G099000 Populus trichocarpa HOM05D006028 ORTHO05D007784 5.0e-112 408.7 387 57.1
Manes.02G069100 Manihot esculenta HOM05D006028 ORTHO05D007784 1.9e-111 406.8 385 56.1
TWI53G1478 Tripterygium wilfordii HOM05D006028 ORTHO05D007784 2.5e-111 406.4 386 57.5
QL02p051229 Quercus lobata HOM05D006028 ORTHO05D007784 3.2e-111 406.0 384 57.3
Haze_14158 Corylus avellana HOM05D006028 ORTHO05D007784 5.5e-111 405.2 393 56.7
Ciclev10011993m.g Citrus clementina HOM05D006028 ORTHO05D007784 7.9e-110 401.4 384 57.6
CSS0038458 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 1.4e-109 400.6 389 57.3
CSS0040274 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 2.0e-108 396.7 389 56.8
GSVIVG01031016001 Vitis vinifera HOM05D006028 ORTHO05D007784 4.3e-108 395.6 385 56.6
CANSAT78G1220 Cannabis sativa HOM05D006028 ORTHO05D007784 9.7e-108 394.4 385 55.3
Thecc.04G133100 Theobroma cacao HOM05D006028 ORTHO05D007784 2.2e-107 393.3 387 55.6
Prupe.3G142900 Prunus persica HOM05D006028 ORTHO05D007784 6.3e-107 391.7 386 54.1
TAR629G2682 Trochodendron aralioides HOM05D006028 ORTHO05D007784 6.3e-107 391.7 383 56.7
Glyma.14G193600 Glycine max HOM05D006028 ORTHO05D007784 4.1e-106 389.0 385 54.5
Gorai.008G055200 Gossypium raimondii HOM05D006028 ORTHO05D007784 1.5e-105 387.1 387 55.6
Gohir.D12G052100 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.6e-105 386.3 387 54.8
CiPaw.03G061900 Carya illinoinensis HOM05D006028 ORTHO05D007784 7.7e-105 384.8 385 54.8
Gohir.A12G053400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.0e-104 384.4 389 54.2
Glyma.02G226700 Glycine max HOM05D006028 ORTHO05D007784 2.2e-104 383.3 386 54.7
Atru.chr1.1685 Acer truncatum HOM05D006028 ORTHO05D007784 6.5e-104 381.7 381 55.1
CsaV3_3G020280 Cucumis sativus L. HOM05D006028 ORTHO05D007784 2.5e-103 379.8 385 54.8
Aqoxy4G02499 Aquilegia oxysepala HOM05D006028 ORTHO05D007784 4.2e-103 379.0 381 53.3
Lj2A441T56 Lonicera japonica HOM05D006028 ORTHO05D007784 4.2e-103 379.0 385 56.1
Hma1.2p1_1109F.1_g258060 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 1.6e-102 377.1 385 54.8
PGR004G1556 Punica granatum HOM05D006028 ORTHO05D007784 3.0e-101 372.9 385 52.7
Phvul.008G261300 Phaseolus vulgaris HOM05D006028 ORTHO05D007784 6.7e-101 371.7 385 53.2
ECA246G2307 Erigeron canadensis HOM05D006028 ORTHO05D007784 2.6e-100 369.8 385 53.0
PGSC0003DMG400026405 Solanum tuberosum HOM05D006028 ORTHO05D007784 3.3e-100 369.4 385 54.0
Sopen02g030790 Solanum pennellii HOM05D006028 ORTHO05D007784 5.7e-100 368.6 385 53.8
VMungo0647G1142 Vigna mungo HOM05D006028 ORTHO05D007784 5.7e-100 368.6 385 53.0
Nitab4.5_0000912g0170 Nicotiana tabacum HOM05D006028 ORTHO05D007784 1.3e-99 367.5 385 53.0
PSO017G5051 Papaver somniferum HOM05D006028 ORTHO05D007784 1.7e-99 367.1 386 52.3
CAN.G625.27 Capsicum annuum HOM05D006028 ORTHO05D007784 2.2e-99 366.7 389 53.0
Rhsim10G0067700 Rhododendron simsii HOM05D006028 ORTHO05D007784 4.8e-99 365.5 385 54.3
Lalb_Chr10g0103311 Lupinus albus HOM05D006028 ORTHO05D007784 8.2e-99 364.8 386 53.9
MELO3C023751.2 Cucumis melo HOM05D006028 ORTHO05D007784 2.4e-98 363.2 387 53.5
Migut.H00221 Erythranthe guttata HOM05D006028 ORTHO05D007784 3.1e-98 362.8 385 52.7
Oeu008432.1 Olea europaea HOM05D006028 ORTHO05D007784 3.1e-98 362.8 385 53.0
Actinidia15886 Actinidia chinensis HOM05D006028 ORTHO05D007784 2.6e-97 359.8 386 53.1
Nitab4.5_0004416g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 4.5e-97 359.0 389 52.2
PSO478G1932 Papaver somniferum HOM05D006028 ORTHO05D007784 5.9e-97 358.6 383 51.7
Cc07_g08770 Coffea canephora HOM05D006028 ORTHO05D007784 2.2e-96 356.7 384 51.0
Duzib138G1322 Durio zibethinus HOM05D006028 ORTHO05D007784 2.2e-96 356.7 387 53.0
LjContig00155g0021894 Lotus japonicus HOM05D006028 ORTHO05D007784 1.1e-95 354.4 389 52.4
Dinv34819 Davidia involucrata HOM05D006028 ORTHO05D007784 5.5e-95 352.1 380 53.7
FvH4_4g11350 Fragaria vesca HOM05D006028 ORTHO05D007784 7.2e-95 351.7 379 52.2
RcHm_v2.0_Chr6g0273571 Rosa chinensis HOM05D006028 ORTHO05D007784 9.4e-95 351.3 378 53.2
TPR.G23017 Trifolium pratense HOM05D006028 ORTHO05D007784 4.7e-94 349.0 385 51.2
FAN07G0954 Fragaria x ananassa HOM05D006028 ORTHO05D007784 3.0e-93 346.3 379 51.7
COL.COLO4_09340 Corchorus olitorius HOM05D006028 ORTHO05D007784 3.9e-93 345.9 387 52.5
Medtr5g070860 Medicago truncatula HOM05D006028 ORTHO05D007784 7.4e-92 341.7 386 51.0
HanXRQChr12g0375811 Helianthus annuus HOM05D006028 ORTHO05D007784 1.3e-91 340.9 385 51.7
Lsat_1_v5_gn_3_79681 Lactuca sativa HOM05D006028 ORTHO05D007784 8.2e-91 338.2 385 51.7
ClCG05G012120 Citrullus lanatus HOM05D006028 ORTHO05D007784 1.4e-90 337.4 385 52.5
Hund13711 Selenicereus undatus HOM05D006028 ORTHO05D007784 1.8e-90 337.0 385 49.6
Nn3g17886 Nelumbo nucifera HOM05D006028 ORTHO05D007784 2.4e-90 336.7 382 51.8
AUR62023297 Chenopodium quinoa HOM05D006028 ORTHO05D007784 1.6e-89 334.0 388 48.5
arahy.Tifrunner.gnm1.ann1.QNRR2Z Arachis hypogaea HOM05D006028 ORTHO05D007784 1.7e-88 330.5 382 49.5
EL10Ac2g04560 Beta vulgaris HOM05D006028 ORTHO05D007784 2.5e-87 326.6 385 48.3
Sabra04G0080900 Salix brachista HOM05D006028 ORTHO05D007784 4.2e-87 325.9 386 47.7
arahy.Tifrunner.gnm1.ann1.I9N3Y5 Arachis hypogaea HOM05D006028 ORTHO05D007784 9.4e-87 324.7 380 50.0
Eucgr.F02499 Eucalyptus grandis HOM05D006028 ORTHO05D007784 9.4e-87 324.7 340 51.5
MSTRG.17981 Avicennia marina HOM05D006028 ORTHO05D007784 4.7e-86 322.4 389 50.6
ATR1125G043 Amborella trichopoda HOM05D006028 ORTHO05D007784 8.0e-86 321.6 396 47.0
SGA_v2.0_scaffold33G13509 Striga asiatica HOM05D006028 ORTHO05D007784 1.2e-84 317.8 391 49.4
SalBow3G3202 Salvia bowleyana HOM05D006028 ORTHO05D007784 2.0e-84 317.0 404 47.8
vmacro05550 Vaccinium macrocarpon HOM05D006028 ORTHO05D007784 5.7e-84 315.5 389 49.4
AUR62009005 Chenopodium quinoa HOM05D006028 ORTHO05D007784 2.8e-83 313.2 406 44.8
Peaxi162Scf00394g00620 Petunia axillaris HOM05D006028 ORTHO05D007784 2.0e-81 307.0 382 49.2
HPP92_018993 Vanilla planifolia HOM05D006028 ORTHO05D007784 3.5e-81 306.2 384 45.6
MD00G1149900 Malus domestica HOM05D006028 ORTHO05D007784 2.2e-80 303.5 338 50.9
Ah.16g101740 Amaranthus hybridus HOM05D006028 ORTHO05D007784 2.9e-80 303.1 384 44.8
CDE05G1052 Ceratophyllum demersum HOM05D006028 ORTHO05D007784 6.1e-78 295.4 385 46.8
Zm00001eb007750 Zea mays HOM05D006028 ORTHO05D007784 2.3e-77 293.5 397 42.6
Os03g0201700 Oryza sativa ssp. japonica HOM05D006028 ORTHO05D007784 8.8e-77 291.6 392 41.3
Sed0006429 Sechium edule HOM05D006028 ORTHO05D007784 8.6e-64 248.4 295 50.5
Psat0s2922g0040 Pisum sativum HOM05D006028 ORTHO05D007784 2.5e-63 246.9 257 51.0
Haze_14159 Corylus avellana HOM05D006028 ORTHO05D007784 6.1e-62 242.3 233 57.5
Pp3c5_13580 Physcomitrium patens HOM05D006028 ORTHO05D007784 1.2e-60 238.0 395 39.2
Sc10g0001120 Simmondsia chinensis HOM05D006028 ORTHO05D007784 3.2e-58 229.9 257 51.0
Ca_05599_v3 Cicer arietinum L. HOM05D006028 ORTHO05D007784 4.6e-57 226.1 321 43.3
Mapoly0156s0014 Marchantia polymorpha HOM05D006028 ORTHO05D007784 8.0e-54 215.3 395 37.2
Hma1.2p1_1109F.1_g258050 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 9.2e-50 201.8 199 55.8
SMO351G0506 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 1.7e-48 197.6 381 37.5
QL02p051191 Quercus lobata HOM05D006028 ORTHO05D007784 1.1e-45 188.3 178 57.9
SEGI_33346 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 1.3e-40 171.4 240 43.3
Solyc02g086100.4 Solanum lycopersicum HOM05D006028 ORTHO05D007784 3.9e-40 169.9 176 55.1
Hma1.2p1_1109F.1_g258070 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 6.6e-40 169.1 176 54.0
SMO009G0016 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 7.3e-39 165.6 378 34.9
RcHm_v2.0_Chr1g0332721 Rosa chinensis HOM05D006028 ORTHO05D007784 9.5e-39 165.2 175 52.6
Potri.017G115566 Populus trichocarpa HOM05D006028 ORTHO05D007784 2.9e-35 153.7 166 51.8
SHI29124 Sapria himalayana HOM05D006028 ORTHO05D007784 1.3e-32 144.8 270 34.8
unitig_748.g7283 Utricularia gibba HOM05D006028 ORTHO05D007784 3.9e-32 143.3 387 31.0
Gorai.007G000700 Gossypium raimondii HOM05D006028 ORTHO05D007784 6.2e-30 136.0 161 52.2
Sabra17G0095800 Salix brachista HOM05D006028 ORTHO05D007784 4.3e-23 113.2 155 49.7
Cpa.g.sc282.2 Carica papaya HOM05D006028 ORTHO05D007784 7.3e-23 112.5 159 44.0
Gohir.A09G249300 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.8e-22 110.5 192 34.9
Gohir.1Z049310 Gossypium hirsutum HOM05D006028 ORTHO05D007784 4.8e-22 109.8 192 34.9
FAN17G0046 Fragaria x ananassa HOM05D006028 ORTHO05D007784 7.6e-20 102.4 158 41.1
AagrBONN_evm.TU.Sc2ySwM_368.1688 Anthoceros agrestis HOM05D006028 ORTHO05D007784 2.7e-17 94.0 146 44.5
AagrBONN_evm.TU.Sc2ySwM_368.1687 Anthoceros agrestis HOM05D006028 ORTHO05D007784 1.9e-15 87.8 160 31.2
Gohir.A06G000200 Gossypium hirsutum HOM05D006028 ORTHO05D007784 3.1e-13 80.5 112 41.1
Gohir.A12G000400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 3.4e-12 77.0 95 44.2
CBR_g37698 Chara braunii HOM05D006028 ORTHO05D007784 2.7e-09 67.4 434 24.7
QL02p051195 Quercus lobata HOM05D006028 ORTHO05D007784 4.6e-09 66.6 72 48.6
SEGI_36511 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 2.3e-08 64.3 80 43.8


User provided reference genes

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