Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p47770 Brassica napus HOM05D007216 ORTHO05D009261 1.3e-126 456.4 239 100.0
BcaC06g34638 Brassica carinata HOM05D007216 ORTHO05D009261 2.9e-118 428.7 236 95.8
C07p26230 Brassica napus HOM05D007216 ORTHO05D009261 2.9e-118 428.7 236 95.8
BolC7t43151H Brassica oleracea HOM05D007216 ORTHO05D009261 2.9e-118 428.7 236 95.8
BraA06t27645Z Brassica rapa HOM05D007216 ORTHO05D009261 2.8e-113 412.1 215 99.5
BcaC06g31685 Brassica carinata HOM05D007216 ORTHO05D009261 3.1e-104 382.1 237 86.1
Thhalv10003353m.g Eutrema salsugineum HOM05D007216 ORTHO05D009261 3.0e-91 339.0 241 79.3
SpUn0744_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 1.5e-90 336.7 216 81.5
BcaC04g21907 Brassica carinata HOM05D007216 ORTHO05D009261 3.7e-89 332.0 238 76.9
BraA09t37658Z Brassica rapa HOM05D007216 ORTHO05D009261 2.7e-87 325.9 238 75.2
A09p20520 Brassica napus HOM05D007216 ORTHO05D009261 5.5e-85 318.2 246 73.6
BolC9t55498H Brassica oleracea HOM05D007216 ORTHO05D009261 5.2e-83 311.6 239 73.6
CARHR006300 Cardamine hirsuta HOM05D007216 ORTHO05D009261 6.8e-83 311.2 240 70.4
AL390U10010 Arabidopsis lyrata HOM05D007216 ORTHO05D009261 7.0e-80 301.2 241 71.8
BcaB07g31004 Brassica carinata HOM05D007216 ORTHO05D009261 3.5e-79 298.9 237 73.0
C09p25930 Brassica napus HOM05D007216 ORTHO05D009261 3.8e-78 295.4 216 75.9
Carub.0008s0499 Capsella rubella HOM05D007216 ORTHO05D009261 2.0e-74 283.1 237 67.9
SpUn0429_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 1.5e-69 266.9 215 68.4
AT5G43650 Arabidopsis thaliana HOM05D007216 ORTHO05D009261 3.4e-66 255.8 220 67.7
Aa31LG5G3580 Aethionema arabicum HOM05D007216 ORTHO05D009261 1.3e-62 243.8 237 57.8
THA.LOC104827376 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 4.1e-48 195.7 233 49.4
THA.LOC104801097 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 1.0e-46 191.0 271 43.5
Haze_11299 Corylus avellana HOM05D007216 ORTHO05D009261 1.1e-35 154.5 204 47.1
Cfa008380 Carpinus fangiana HOM05D007216 ORTHO05D009261 4.0e-35 152.5 206 45.6
Haze_11297 Corylus avellana HOM05D007216 ORTHO05D009261 4.0e-35 152.5 221 45.2
CSS0019068 Camellia sinensis var. sinensis HOM05D007216 ORTHO05D009261 3.4e-34 149.4 176 50.0
QL06p015626 Quercus lobata HOM05D007216 ORTHO05D009261 7.6e-34 148.3 206 43.2
Atru.chr4.2233 Acer truncatum HOM05D007216 ORTHO05D009261 5.4e-32 142.1 200 44.5
Thecc.04G245800 Theobroma cacao HOM05D007216 ORTHO05D009261 3.5e-31 139.4 177 45.8
Cpa.g.sc58.45 Carica papaya HOM05D007216 ORTHO05D009261 7.9e-31 138.3 201 41.8
Duzib151G0820 Durio zibethinus HOM05D007216 ORTHO05D009261 1.8e-30 137.1 178 45.5
Duzib052G0756 Durio zibethinus HOM05D007216 ORTHO05D009261 2.3e-30 136.7 177 45.2
Potri.010G077000 Populus trichocarpa HOM05D007216 ORTHO05D009261 6.7e-30 135.2 230 38.3
Duzib151G0028 Durio zibethinus HOM05D007216 ORTHO05D009261 8.7e-30 134.8 178 44.9
Gohir.A09G222900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 8.7e-30 134.8 202 41.6
Prupe.1G030500 Prunus persica HOM05D007216 ORTHO05D009261 1.1e-29 134.4 182 45.6
MD16G1208400 Malus domestica HOM05D007216 ORTHO05D009261 1.5e-29 134.0 206 43.7
Ciclev10005777m.g Citrus clementina HOM05D007216 ORTHO05D009261 1.9e-29 133.7 204 42.6
Sopen09g032280 Solanum pennellii HOM05D007216 ORTHO05D009261 2.5e-29 133.3 206 41.3
Solyc09g083360.3 Solanum lycopersicum HOM05D007216 ORTHO05D009261 3.3e-29 132.9 209 41.1
Rhsim02G0032900 Rhododendron simsii HOM05D007216 ORTHO05D009261 4.3e-29 132.5 178 46.6
CiPaw.02G116600 Carya illinoinensis HOM05D007216 ORTHO05D009261 5.6e-29 132.1 182 45.1
Gorai.006G246400 Gossypium raimondii HOM05D007216 ORTHO05D009261 9.6e-29 131.3 189 42.3
TAR365G0907 Trochodendron aralioides HOM05D007216 ORTHO05D009261 9.6e-29 131.3 248 40.7
Actinidia05467 Actinidia chinensis HOM05D007216 ORTHO05D009261 1.6e-28 130.6 201 44.8
Actinidia08446 Actinidia chinensis HOM05D007216 ORTHO05D009261 1.6e-28 130.6 205 43.4
DCAR_027275 Daucus carota HOM05D007216 ORTHO05D009261 1.6e-28 130.6 202 39.1
CiPaw.01G190600 Carya illinoinensis HOM05D007216 ORTHO05D009261 3.7e-28 129.4 210 41.9
QL06p015621 Quercus lobata HOM05D007216 ORTHO05D009261 4.8e-28 129.0 185 42.7
MD13G1206900 Malus domestica HOM05D007216 ORTHO05D009261 8.1e-28 128.3 204 41.2
RcHm_v2.0_Chr4g0390311 Rosa chinensis HOM05D007216 ORTHO05D009261 8.1e-28 128.3 220 41.8
Gohir.D09G224900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 1.1e-27 127.9 174 43.7
Dinv29914 Davidia involucrata HOM05D007216 ORTHO05D009261 1.8e-27 127.1 145 52.4
PGR031G3332 Punica granatum HOM05D007216 ORTHO05D009261 1.8e-27 127.1 239 35.1
GSVIVG01018111001 Vitis vinifera HOM05D007216 ORTHO05D009261 2.4e-27 126.7 169 47.3
COL.COLO4_15786 Corchorus olitorius HOM05D007216 ORTHO05D009261 5.3e-27 125.6 183 43.7
FvH4_4g02610 Fragaria vesca HOM05D007216 ORTHO05D009261 6.9e-27 125.2 210 42.9
Sabra10G0031800 Salix brachista HOM05D007216 ORTHO05D009261 3.4e-26 122.9 234 36.3
Duzib212G0514 Durio zibethinus HOM05D007216 ORTHO05D009261 5.8e-26 122.1 215 39.1
CsaV3_2G013060 Cucumis sativus L. HOM05D007216 ORTHO05D009261 7.6e-26 121.7 186 43.0
Cc03_g04820 Coffea canephora HOM05D007216 ORTHO05D009261 1.3e-25 120.9 207 41.5
Potri.008G161800 Populus trichocarpa HOM05D007216 ORTHO05D009261 1.3e-25 120.9 202 39.1
Eucgr.H00196 Eucalyptus grandis HOM05D007216 ORTHO05D009261 3.8e-25 119.4 203 39.4
Medtr1g040435 Medicago truncatula HOM05D007216 ORTHO05D009261 6.4e-25 118.6 207 40.6
ATR0665G548 Amborella trichopoda HOM05D007216 ORTHO05D009261 8.4e-25 118.2 198 39.4
TWI73G0753 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 8.4e-25 118.2 172 41.9
Migut.G00433 Erythranthe guttata HOM05D007216 ORTHO05D009261 1.4e-24 117.5 226 37.6
Manes.03G169100 Manihot esculenta HOM05D007216 ORTHO05D009261 2.4e-24 116.7 202 37.1
MELO3C026778.2 Cucumis melo HOM05D007216 ORTHO05D009261 4.2e-24 115.9 186 41.4
Sed0000846 Sechium edule HOM05D007216 ORTHO05D009261 5.5e-24 115.5 178 40.4
Sed0019243 Sechium edule HOM05D007216 ORTHO05D009261 5.5e-24 115.5 178 40.4
Nn3g19525 Nelumbo nucifera HOM05D007216 ORTHO05D009261 7.1e-24 115.2 204 40.7
Nn1g02593 Nelumbo nucifera HOM05D007216 ORTHO05D009261 1.2e-23 114.4 211 38.4
Oeu008788.2 Olea europaea HOM05D007216 ORTHO05D009261 1.2e-23 114.4 214 38.3
Peaxi162Scf00813g00118 Petunia axillaris HOM05D007216 ORTHO05D009261 1.6e-23 114.0 186 38.7
Sed0021571 Sechium edule HOM05D007216 ORTHO05D009261 1.6e-23 114.0 186 38.7
CANSAT78G2280 Cannabis sativa HOM05D007216 ORTHO05D009261 2.1e-23 113.6 249 34.1
FAN12G1817 Fragaria x ananassa HOM05D007216 ORTHO05D009261 2.7e-23 113.2 189 41.8
Glyma.02G000800 Glycine max HOM05D007216 ORTHO05D009261 1.3e-22 110.9 251 35.5
MSTRG.4097 Avicennia marina HOM05D007216 ORTHO05D009261 2.3e-22 110.2 209 36.8
Lalb_Chr03g0037861 Lupinus albus HOM05D007216 ORTHO05D009261 3.9e-22 109.4 191 39.3
Sc13g0004990 Simmondsia chinensis HOM05D007216 ORTHO05D009261 3.9e-22 109.4 219 38.8
ClCG06G006720 Citrullus lanatus HOM05D007216 ORTHO05D009261 5.1e-22 109.0 186 39.2
TWI09G1088 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 5.1e-22 109.0 181 37.0
Eucgr.J01563 Eucalyptus grandis HOM05D007216 ORTHO05D009261 6.7e-22 108.6 177 39.5
TAR636G2640 Trochodendron aralioides HOM05D007216 ORTHO05D009261 8.7e-22 108.2 193 39.9
DCAR_027276 Daucus carota HOM05D007216 ORTHO05D009261 1.9e-21 107.1 203 36.9
Psat6g102240 Pisum sativum HOM05D007216 ORTHO05D009261 2.5e-21 106.7 208 38.9
Sabra08G0123600 Salix brachista HOM05D007216 ORTHO05D009261 1.6e-20 104.0 186 37.1
Gorai.005G046700 Gossypium raimondii HOM05D007216 ORTHO05D009261 2.1e-20 103.6 175 38.3
Gohir.D02G042400 Gossypium hirsutum HOM05D007216 ORTHO05D009261 2.8e-20 103.2 175 38.3
Gohir.A02G035500 Gossypium hirsutum HOM05D007216 ORTHO05D009261 4.0e-19 99.4 175 37.1
Phvul.007G280700 Phaseolus vulgaris HOM05D007216 ORTHO05D009261 4.2e-16 89.4 160 40.0
TPR.G22479 Trifolium pratense HOM05D007216 ORTHO05D009261 2.1e-15 87.0 199 36.2
Zm00001eb056760 Zea mays HOM05D007216 ORTHO05D009261 2.1e-15 87.0 146 39.7
Os03g0741100 Oryza sativa ssp. japonica HOM05D007216 ORTHO05D009261 2.7e-15 86.7 143 38.5
Dinv44631 Davidia involucrata HOM05D007216 ORTHO05D009261 3.5e-15 86.3 108 47.2
Nitab4.5_0004798g0070 Nicotiana tabacum HOM05D007216 ORTHO05D009261 1.3e-14 84.3 238 30.3
Lj6C656T7 Lonicera japonica HOM05D007216 ORTHO05D009261 2.3e-14 83.6 192 35.9
Hma1.2p1_0893F.1_g233480 Hydrangea macrophylla HOM05D007216 ORTHO05D009261 4.3e-13 79.3 103 49.5
HPP92_023463 Vanilla planifolia HOM05D007216 ORTHO05D009261 1.8e-11 73.9 212 33.0
HPP92_023468 Vanilla planifolia HOM05D007216 ORTHO05D009261 2.4e-11 73.6 212 33.0
Nitab4.5_0000525g0160 Nicotiana tabacum HOM05D007216 ORTHO05D009261 2.0e-10 70.5 176 30.7
Aqoxy5G00327 Aquilegia oxysepala HOM05D007216 ORTHO05D009261 3.4e-10 69.7 115 34.8
CAN.G1007.15 Capsicum annuum HOM05D007216 ORTHO05D009261 7.7e-10 68.6 95 44.2
HPP92_027840 Vanilla planifolia HOM05D007216 ORTHO05D009261 2.2e-09 67.0 195 33.8


User provided reference genes

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