Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p45470 Brassica napus HOM05D000329 ORTHO05D027407 1.4e-114 416.4 216 100.0
BolC7t43591H Brassica oleracea HOM05D000329 ORTHO05D002813 3.4e-81 305.4 202 81.2
C07p30500 Brassica napus HOM05D000329 ORTHO05D002813 1.4e-79 300.1 202 80.2
BcaC06g34309 Brassica carinata HOM05D000329 ORTHO05D002813 7.5e-65 251.1 138 93.5
BcaC06g31432 Brassica carinata HOM05D000329 ORTHO05D002813 3.0e-61 239.2 208 68.3
Thhalv10000785m.g Eutrema salsugineum HOM05D000329 ORTHO05D002813 1.6e-59 233.4 205 66.8
BraA09t37872Z Brassica rapa HOM05D000329 ORTHO05D002813 1.3e-53 213.8 202 63.9
A09p22670 Brassica napus HOM05D000329 ORTHO05D002813 1.7e-53 213.4 203 63.5
BcaC04g21669 Brassica carinata HOM05D000329 ORTHO05D002813 1.9e-52 209.9 199 65.3
AL8G11370 Arabidopsis lyrata HOM05D000329 ORTHO05D002813 9.5e-52 207.6 211 63.5
C09p29150 Brassica napus HOM05D000329 ORTHO05D002813 9.5e-52 207.6 199 64.8
AT5G46910 Arabidopsis thaliana HOM05D000329 ORTHO05D002813 2.8e-51 206.1 207 61.8
BolC9t55773H Brassica oleracea HOM05D000329 ORTHO05D002813 2.3e-50 203.0 200 63.0
CARHR174520 Cardamine hirsuta HOM05D000329 ORTHO05D002813 2.3e-50 203.0 204 60.8
Sp2g11700 Schrenkiella parvula HOM05D000329 ORTHO05D002813 1.5e-49 200.3 208 60.1
Carub.0008s0093 Capsella rubella HOM05D000329 ORTHO05D002813 4.4e-49 198.7 210 58.1
A02p30480 Brassica napus HOM05D000329 ORTHO05D002813 5.8e-41 171.8 240 48.3
BcaC07g37851 Brassica carinata HOM05D000329 ORTHO05D027407 4.6e-38 162.2 149 65.1
BraA02t08064Z Brassica rapa HOM05D000329 ORTHO05D002813 1.0e-37 161.0 240 47.1
BolC2t10837H Brassica oleracea HOM05D000329 ORTHO05D002813 2.9e-32 142.9 203 49.3
BcaC03g16903 Brassica carinata HOM05D000329 ORTHO05D002813 6.4e-32 141.7 203 49.3
C02p48060 Brassica napus HOM05D000329 ORTHO05D002813 6.4e-32 141.7 203 49.3
Aa31LG9G6010 Aethionema arabicum HOM05D000329 ORTHO05D002813 9.3e-31 137.9 186 50.5
BraA06t27415Z Brassica rapa HOM05D000329 ORTHO05D027407 1.5e-25 120.6 70 95.7
BcaB07g30805 Brassica carinata HOM05D000329 ORTHO05D002813 1.4e-23 114.0 121 57.9
BcaC05g24928 Brassica carinata HOM05D000629 ORTHO05D000576 1.3e-21 107.5 103 67.0
BolC1t05513H Brassica oleracea HOM05D000629 ORTHO05D027407 1.8e-21 107.1 98 68.4
THA.LOC104798340 Tarenaya hassleriana HOM05D000329 ORTHO05D002813 8.7e-21 104.8 179 43.0
Nn3g19402 Nelumbo nucifera HOM05D000329 ORTHO05D002813 5.0e-08 62.4 183 35.5
Cpa.g.sc90.3 Carica papaya HOM05D000329 ORTHO05D002813 9.3e-07 58.2 191 34.0
Potri.001G137700 Populus trichocarpa HOM05D000329 ORTHO05D002813 1.2e-06 57.8 194 29.9
Potri.003G096100 Populus trichocarpa HOM05D000329 ORTHO05D002813 1.6e-06 57.4 196 30.6


User provided reference genes

Program Settings