Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 1.2e-132 476.5 232 100.0
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 2.5e-130 468.8 233 98.7
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 3.0e-128 461.8 236 96.2
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 3.0e-128 461.8 236 96.2
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 3.3e-127 458.4 236 95.8
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 2.4e-117 425.6 243 89.3
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 7.7e-108 394.0 234 85.9
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 1.0e-107 393.7 250 83.2
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 1.0e-104 383.6 234 85.0
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 3.0e-104 382.1 228 85.5
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 1.6e-100 369.8 229 83.0
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 6.1e-97 357.8 286 68.5
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 1.6e-92 343.2 170 97.1
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 1.8e-88 329.7 252 68.3
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 1.1e-80 303.9 253 62.5
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 4.0e-80 302.0 237 66.2
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 2.6e-79 299.3 252 61.9
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 2.6e-79 299.3 252 63.1
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 3.4e-79 298.9 251 62.2
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 4.4e-79 298.5 236 65.3
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 7.5e-79 297.7 246 63.4
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 1.3e-78 297.0 223 69.1
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 4.9e-78 295.0 179 79.9
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 8.3e-78 294.3 204 70.6
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 8.3e-78 294.3 222 68.9
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 2.4e-77 292.7 179 78.8
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 3.2e-77 292.4 220 65.0
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 3.2e-77 292.4 229 66.8
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 7.0e-77 291.2 230 65.2
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 7.0e-77 291.2 230 65.2
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 1.2e-76 290.4 173 78.6
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 1.6e-76 290.0 221 66.1
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 4.6e-76 288.5 223 66.8
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 6.0e-76 288.1 222 67.1
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 6.0e-76 288.1 181 77.9
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 7.8e-76 287.7 187 75.9
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 1.0e-75 287.3 250 62.4
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 1.3e-75 287.0 179 78.2
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 1.3e-75 287.0 227 66.1
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 1.3e-75 287.0 237 63.7
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 1.3e-75 287.0 198 71.7
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 3.0e-75 285.8 281 58.0
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 3.0e-75 285.8 179 77.7
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 5.0e-75 285.0 174 78.7
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 5.0e-75 285.0 170 79.4
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 8.6e-75 284.3 222 66.2
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 1.1e-74 283.9 179 77.1
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 1.1e-74 283.9 175 78.9
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 1.5e-74 283.5 224 64.3
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 1.5e-74 283.5 171 77.2
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 1.9e-74 283.1 178 77.0
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 1.9e-74 283.1 213 67.6
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 1.9e-74 283.1 237 62.4
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 5.6e-74 281.6 178 75.3
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 7.3e-74 281.2 226 63.3
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 9.5e-74 280.8 174 77.6
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 9.5e-74 280.8 226 64.6
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 2.8e-73 279.3 181 76.8
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 2.8e-73 279.3 178 75.8
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 3.6e-73 278.9 222 64.9
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 3.6e-73 278.9 183 72.1
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 4.7e-73 278.5 231 62.3
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 6.2e-73 278.1 241 61.0
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 1.1e-72 277.3 178 75.3
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 1.8e-72 276.6 228 62.7
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 1.8e-72 276.6 227 61.7
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 2.3e-72 276.2 241 60.2
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 3.1e-72 275.8 175 76.0
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 6.8e-72 274.6 214 65.4
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 6.8e-72 274.6 228 61.4
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 8.9e-72 274.2 175 75.4
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 1.2e-71 273.9 167 78.4
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 1.5e-71 273.5 175 74.9
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 1.5e-71 273.5 175 74.9
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 2.6e-71 272.7 173 74.0
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 7.5e-71 271.2 181 73.5
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 1.3e-70 270.4 165 78.2
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 1.3e-70 270.4 231 61.5
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 1.7e-70 270.0 167 76.6
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 8.3e-70 267.7 169 72.8
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 1.4e-69 266.9 154 81.2
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 1.9e-69 266.5 178 72.5
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 4.1e-69 265.4 184 68.5
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 7.1e-69 264.6 164 75.0
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 1.2e-68 263.8 170 73.5
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 1.1e-64 250.8 223 57.0
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 1.4e-64 250.4 228 57.5
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 1.2e-63 247.3 175 66.9
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 4.4e-63 245.4 176 66.5
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 9.9e-63 244.2 159 73.6
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 7.1e-61 238.0 172 68.6
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 2.7e-60 236.1 194 62.4
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 4.6e-60 235.3 168 63.1
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 1.7e-59 233.4 176 65.9
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 2.3e-59 233.0 114 98.2
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 5.6e-58 228.4 114 94.7
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 2.8e-57 226.1 114 93.9
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 2.8e-57 226.1 222 55.0
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 3.6e-57 225.7 182 64.3
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 2.4e-53 213.0 210 54.8
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 3.0e-51 206.1 184 59.2
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 6.6e-51 204.9 136 75.7
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 8.1e-49 198.0 131 68.7
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 1.4e-45 187.2 126 67.5
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 5.4e-45 185.3 218 50.5
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 1.2e-44 184.1 136 74.3
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 3.5e-44 182.6 116 74.1
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 6.9e-40 168.3 107 77.6
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 6.9e-40 168.3 177 48.0
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 9.0e-40 167.9 109 74.3
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 2.0e-39 166.8 109 72.5
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 3.4e-39 166.0 148 60.1
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 3.8e-38 162.5 107 72.0
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 6.4e-38 161.8 181 48.1
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 9.4e-21 104.8 153 40.5
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 8.2e-17 91.7 58 75.9
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 9.1e-16 88.2 184 29.3
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 1.3e-14 84.3 183 30.6
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 1.4e-13 80.9 167 29.9
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 2.0e-10 70.5 63 55.6
AT3G44485 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 1.7e-09 67.4 60 60.0


User provided reference genes

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