Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p13570 Brassica napus HOM05D003469 ORTHO05D004084 0.0e+00 1716.8 907 100.0
BraA06t24509Z Brassica rapa HOM05D003469 ORTHO05D004084 0.0e+00 1714.9 907 99.9
C05p16090 Brassica napus HOM05D003469 ORTHO05D004084 0.0e+00 1641.7 907 94.7
BolC5t30309H Brassica oleracea HOM05D003469 ORTHO05D004084 0.0e+00 1641.3 907 94.6
BcaC05g25689 Brassica carinata HOM05D003469 ORTHO05D004084 0.0e+00 1640.2 907 94.7
BcaB07g34024 Brassica carinata HOM05D003469 ORTHO05D004084 0.0e+00 1488.0 908 86.7
BolC4t22588H Brassica oleracea HOM05D003469 ORTHO05D004084 0.0e+00 1434.9 908 83.3
Thhalv10006758m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 0.0e+00 1431.0 908 84.0
BcaC02g11929 Brassica carinata HOM05D003469 ORTHO05D004084 0.0e+00 1422.1 908 82.4
Carub.0001s1741 Capsella rubella HOM05D003469 ORTHO05D004084 0.0e+00 1382.1 915 80.9
C04p09790 Brassica napus HOM05D003469 ORTHO05D004084 0.0e+00 1376.3 923 79.1
AL1G30030 Arabidopsis lyrata HOM05D003469 ORTHO05D004084 0.0e+00 1374.0 912 80.7
AT1G17680 Arabidopsis thaliana HOM05D003469 ORTHO05D004084 0.0e+00 1364.0 909 79.9
Aa31LG7G2510 Aethionema arabicum HOM05D003469 ORTHO05D004084 0.0e+00 1233.4 949 71.7
THA.LOC104807542 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 0.0e+00 1093.6 843 69.4
THA.LOC104800339 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 4.4e-268 928.3 853 61.5
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 1.4e-242 843.6 561 77.9
C04p00480 Brassica napus HOM05D003469 ORTHO05D004084 3.0e-232 809.3 761 59.9
Sp1g15780 Schrenkiella parvula HOM05D003469 ORTHO05D004084 2.8e-222 776.2 443 87.1
Thecc.08G168800 Theobroma cacao HOM05D003469 ORTHO05D004084 3.7e-214 749.2 855 49.4
TAR628G0771 Trochodendron aralioides HOM05D003469 ORTHO05D004084 1.7e-211 740.3 854 49.3
CiPaw.03G010300 Carya illinoinensis HOM05D003469 ORTHO05D004084 4.2e-210 735.7 867 48.1
TWI38G1177 Tripterygium wilfordii HOM05D003469 ORTHO05D004084 4.1e-205 719.2 857 48.4
Lalb_Chr07g0195581 Lupinus albus HOM05D003469 ORTHO05D004084 1.6e-204 717.2 869 46.7
Solyc06g063420.4 Solanum lycopersicum HOM05D003469 ORTHO05D004084 4.2e-202 709.1 856 46.1
CARHR018280 Cardamine hirsuta HOM05D003469 ORTHO05D004084 5.5e-202 708.8 483 75.2
Phvul.011G031000 Phaseolus vulgaris HOM05D003469 ORTHO05D004084 1.6e-201 707.2 854 47.9
arahy.Tifrunner.gnm1.ann1.M9HC5A Arachis hypogaea HOM05D003469 ORTHO05D004084 8.0e-201 704.9 866 46.0
Sopen06g022880 Solanum pennellii HOM05D003469 ORTHO05D004084 8.0e-201 704.9 856 46.1
Glyma.12G027700 Glycine max HOM05D003469 ORTHO05D004084 4.0e-200 702.6 856 47.4
Actinidia21939 Actinidia chinensis HOM05D003469 ORTHO05D004084 9.8e-199 698.0 852 46.0
ClCG07G013810 Citrullus lanatus HOM05D003469 ORTHO05D004084 1.3e-198 697.6 858 46.7
Glyma.11G102000 Glycine max HOM05D003469 ORTHO05D004084 1.7e-198 697.2 856 46.5
VMungo1127G1455 Vigna mungo HOM05D003469 ORTHO05D004084 2.8e-198 696.4 856 47.5
GSVIVG01036699001 Vitis vinifera HOM05D003469 ORTHO05D004084 2.4e-197 693.3 903 44.2
Dinv28114 Davidia involucrata HOM05D003469 ORTHO05D004084 9.1e-197 691.4 882 45.6
CsaV3_3G043790 Cucumis sativus L. HOM05D003469 ORTHO05D004084 5.0e-195 685.6 856 46.0
Gorai.008G247300 Gossypium raimondii HOM05D003469 ORTHO05D004084 1.1e-194 684.5 856 46.1
Eucgr.G01221 Eucalyptus grandis HOM05D003469 ORTHO05D004084 1.5e-194 684.1 864 46.6
Nn5g27173 Nelumbo nucifera HOM05D003469 ORTHO05D004084 3.3e-194 682.9 857 46.6
arahy.Tifrunner.gnm1.ann1.046I3L Arachis hypogaea HOM05D003469 ORTHO05D004084 4.2e-194 682.6 859 45.2
MELO3C013095.2 Cucumis melo HOM05D003469 ORTHO05D004084 4.2e-194 682.6 856 45.8
PSO170G4646 Papaver somniferum HOM05D003469 ORTHO05D004084 1.8e-192 677.2 858 45.5
Sed0013857 Sechium edule HOM05D003469 ORTHO05D004084 3.0e-192 676.4 861 45.4
Gohir.A12G230000 Gossypium hirsutum HOM05D003469 ORTHO05D004084 3.4e-191 672.9 856 45.6
MSTRG.1003 Avicennia marina HOM05D003469 ORTHO05D004084 4.1e-189 666.0 866 44.6
Cc00_g11470 Coffea canephora HOM05D003469 ORTHO05D004084 2.3e-187 660.2 862 44.8
Gohir.D12G231100 Gossypium hirsutum HOM05D003469 ORTHO05D004084 2.9e-187 659.8 856 45.2
Manes.06G016500 Manihot esculenta HOM05D003469 ORTHO05D004084 1.5e-186 657.5 832 45.8
Aqoxy6G00028 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 2.3e-184 650.2 856 44.4
Duzib235G0325 Durio zibethinus HOM05D003469 ORTHO05D004084 3.1e-184 649.8 853 45.5
MBI03_g18641_MAGBIO Magnolia biondii HOM05D003469 ORTHO05D004084 6.8e-184 648.7 856 44.9
Lj1g0005967 Lotus japonicus HOM05D003469 ORTHO05D004084 2.6e-183 646.7 855 44.3
TPR.G38733 Trifolium pratense HOM05D003469 ORTHO05D004084 2.6e-183 646.7 870 43.4
Rhsim12G0000800 Rhododendron simsii HOM05D003469 ORTHO05D004084 1.3e-182 644.4 761 47.0
FvH4_6g37900 Fragaria vesca HOM05D003469 ORTHO05D004084 2.2e-182 643.7 854 44.0
ECA232G2309 Erigeron canadensis HOM05D003469 ORTHO05D004084 4.9e-182 642.5 852 44.0
FAN14G5376 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.1e-181 641.3 854 43.9
FAN02G0848 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.3e-179 634.4 854 43.7
Medtr4g079390 Medicago truncatula HOM05D003469 ORTHO05D004084 1.3e-179 634.4 849 43.3
QL09p054764 Quercus lobata HOM05D003469 ORTHO05D004084 1.7e-179 634.0 772 46.5
CANSAT78G0348 Cannabis sativa HOM05D003469 ORTHO05D004084 5.0e-179 632.5 862 44.5
Migut.C00329 Erythranthe guttata HOM05D003469 ORTHO05D004084 2.5e-178 630.2 868 43.8
Nitab4.5_0003757g0100 Nicotiana tabacum HOM05D003469 ORTHO05D004084 2.5e-178 630.2 858 43.1
RcHm_v2.0_Chr2g0151101 Rosa chinensis HOM05D003469 ORTHO05D004084 3.3e-178 629.8 844 44.0
Atru.chr9.1130 Acer truncatum HOM05D003469 ORTHO05D004084 1.2e-177 627.9 858 44.1
Sc09g0010840 Simmondsia chinensis HOM05D003469 ORTHO05D004084 1.4e-176 624.4 861 43.9
FAN09G4617 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.8e-176 624.0 854 43.1
Hund09398 Selenicereus undatus HOM05D003469 ORTHO05D004084 8.9e-176 621.7 858 41.6
AUR62008300 Chenopodium quinoa HOM05D003469 ORTHO05D004084 2.0e-175 620.5 855 42.1
Peaxi162Scf00818g00323 Petunia axillaris HOM05D003469 ORTHO05D004084 2.6e-175 620.2 813 42.9
Potri.013G128900 Populus trichocarpa HOM05D003469 ORTHO05D004084 3.4e-175 619.8 848 44.7
Medtr4g074860 Medicago truncatula HOM05D003469 ORTHO05D004084 5.8e-175 619.0 871 42.3
CSS0010807 Camellia sinensis var. sinensis HOM05D003469 ORTHO05D004084 2.2e-174 617.1 879 43.6
Prupe.8G070000 Prunus persica HOM05D003469 ORTHO05D004084 2.9e-174 616.7 855 42.8
RcHm_v2.0_Chr2g0151071 Rosa chinensis HOM05D003469 ORTHO05D004084 1.9e-173 614.0 853 42.9
EL10Ac5g10861 Beta vulgaris HOM05D003469 ORTHO05D004084 5.4e-173 612.5 882 41.8
Ciclev10026956m.g Citrus clementina HOM05D003469 ORTHO05D004084 7.8e-172 608.6 838 43.7
Lj9C173G0 Lonicera japonica HOM05D003469 ORTHO05D004084 1.3e-171 607.8 853 44.0
CAN.G14.42 Capsicum annuum HOM05D003469 ORTHO05D004084 1.5e-170 604.4 856 42.4
Os11g0266800 Oryza sativa ssp. japonica HOM05D003469 ORTHO05D004084 1.5e-170 604.4 842 41.3
SalBow7G2370 Salvia bowleyana HOM05D003469 ORTHO05D004084 1.5e-170 604.4 904 42.0
HanXRQChr09g0266911 Helianthus annuus HOM05D003469 ORTHO05D004084 7.3e-170 602.1 854 41.5
Lj9C162G1 Lonicera japonica HOM05D003469 ORTHO05D004084 1.2e-167 594.7 893 41.7
MD09G1155000 Malus domestica HOM05D003469 ORTHO05D004084 1.5e-167 594.3 852 42.1
TPR.G32330 Trifolium pratense HOM05D003469 ORTHO05D004084 1.7e-166 590.9 835 42.6
RcHm_v2.0_Chr6g0293861 Rosa chinensis HOM05D003469 ORTHO05D004084 1.1e-165 588.2 865 42.5
AUR62031062 Chenopodium quinoa HOM05D003469 ORTHO05D004084 1.4e-165 587.8 856 41.6
unitig_26.g9845 Utricularia gibba HOM05D003469 ORTHO05D004084 4.1e-165 586.3 899 41.0
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.5e-162 577.8 865 41.3
Aqoxy4G02849 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 1.4e-160 571.2 852 40.7
FAN15G0576 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.4e-160 571.2 864 40.7
HPP92_015320 Vanilla planifolia HOM05D003469 ORTHO05D004084 7.6e-159 565.5 839 41.5
DCAR_001477 Daucus carota HOM05D003469 ORTHO05D004084 1.3e-158 564.7 868 41.5
SGA_v2.0_scaffold8G04312 Striga asiatica HOM05D003469 ORTHO05D004084 1.6e-156 557.8 926 38.8
Nitab4.5_0005224g0040 Nicotiana tabacum HOM05D003469 ORTHO05D004084 3.3e-154 550.1 874 37.8
Nitab4.5_0002906g0070 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.2e-153 548.1 843 38.7
Lsat_1_v5_gn_4_131841 Lactuca sativa HOM05D003469 ORTHO05D004084 5.3e-152 542.7 855 39.4
Nitab4.5_0002354g0130 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.2e-151 541.6 848 40.9
FAN27G0386 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.5e-151 541.2 860 40.1
SMO164G0159 Selaginella moellendorffii HOM05D003469 ORTHO05D004084 2.3e-147 527.3 871 37.7
Peaxi162Scf00015g00107 Petunia axillaris HOM05D003469 ORTHO05D004084 9.6e-146 521.9 853 38.3
Dinv15687 Davidia involucrata HOM05D003469 ORTHO05D004084 3.1e-144 516.9 874 40.0
FvH4_2g25610 Fragaria vesca HOM05D003469 ORTHO05D004084 6.0e-140 502.7 865 37.9
Zm00001eb171180 Zea mays HOM05D003469 ORTHO05D004084 3.0e-139 500.4 851 38.2
Ciclev10019721m.g Citrus clementina HOM05D003469 ORTHO05D004084 4.3e-138 496.5 521 52.6
AUR62039415 Chenopodium quinoa HOM05D003469 ORTHO05D004084 2.8e-137 493.8 674 42.3
Mapoly0024s0108 Marchantia polymorpha HOM05D003469 ORTHO05D004084 8.4e-134 482.3 806 36.7
C04p00500 Brassica napus HOM05D003469 ORTHO05D004084 1.1e-130 471.9 499 55.9
vmacro00914 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 3.2e-125 453.8 1314 28.7
Lj9A422T76 Lonicera japonica HOM05D003469 ORTHO05D004084 1.2e-124 451.8 758 39.3
Haze_14033 Corylus avellana HOM05D003469 ORTHO05D004084 1.9e-117 427.9 562 44.5
Pp3c8_10360 Physcomitrium patens HOM05D003469 ORTHO05D004084 2.0e-111 407.9 874 32.8
TAR633G1289 Trochodendron aralioides HOM05D003469 ORTHO05D004084 7.7e-111 406.0 413 52.8
AagrBONN_evm.TU.Sc2ySwM_362.2764 Anthoceros agrestis HOM05D003469 ORTHO05D004084 2.2e-110 404.4 885 33.0
CDE05G0531 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 8.5e-110 402.5 465 46.9
Pp3c8_10366 Physcomitrium patens HOM05D003469 ORTHO05D004084 4.7e-108 396.7 846 33.6
Ca_19034_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 7.9e-108 396.0 358 56.4
PGSC0003DMG400033134 Solanum tuberosum HOM05D003469 ORTHO05D004084 8.2e-105 386.0 319 59.2
Ah.15g095790 Amaranthus hybridus HOM05D003469 ORTHO05D004084 1.8e-104 384.8 1343 26.1
MD17G1141100 Malus domestica HOM05D003469 ORTHO05D004084 1.1e-96 359.0 285 61.4
BcaC02g12573 Brassica carinata HOM05D003469 ORTHO05D004084 2.4e-96 357.8 241 78.0
ATR1089G047 Amborella trichopoda HOM05D003469 ORTHO05D004084 1.7e-94 351.7 852 32.9
Oeu019664.1 Olea europaea HOM05D003469 ORTHO05D004084 2.8e-89 334.3 363 46.8
SHI03012 Sapria himalayana HOM05D003469 ORTHO05D004084 1.8e-88 331.6 271 60.5
EL10Ac5g10434 Beta vulgaris HOM05D003469 ORTHO05D004084 1.2e-74 285.8 629 32.1
TAR633G1719 Trochodendron aralioides HOM05D003469 ORTHO05D004084 1.8e-72 278.5 397 41.8
FvH4_6g38050 Fragaria vesca HOM05D003469 ORTHO05D004084 1.0e-70 272.7 786 29.3
FAN20G2279 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.0e-67 262.7 476 34.5
Thhalv10002713m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 8.3e-65 253.1 139 89.9
HanXRQChr13g0406831 Helianthus annuus HOM05D003469 ORTHO05D004084 1.9e-64 251.9 195 59.0
CBR_g36749 Chara braunii HOM05D003469 ORTHO05D004084 2.4e-64 251.5 1088 23.3
Cpa.g.sc21.245 Carica papaya HOM05D003469 ORTHO05D004084 1.0e-62 246.1 351 41.3
FvH4_6g38030 Fragaria vesca HOM05D003469 ORTHO05D004084 1.3e-62 245.7 392 38.5
Ca_16139_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 1.1e-61 242.7 323 42.1
SEGI_08666 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 7.3e-61 240.0 178 64.6
COL.COLO4_25121 Corchorus olitorius HOM05D003469 ORTHO05D004084 4.7e-60 237.3 360 40.8
MD17G1141000 Malus domestica HOM05D003469 ORTHO05D004084 8.1e-60 236.5 386 35.8
Potri.013G129500 Populus trichocarpa HOM05D003469 ORTHO05D000003 1.4e-56 225.7 385 39.2
AUR62000094 Chenopodium quinoa HOM05D003469 ORTHO05D004084 1.5e-53 215.7 426 32.9
BcaC02g12574 Brassica carinata HOM05D003469 ORTHO05D004084 2.7e-47 194.9 100 94.0
CDE05G3544 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 2.1e-44 185.3 347 36.3
BcaB02g08777 Brassica carinata HOM05D003469 ORTHO05D004084 2.4e-40 171.8 245 50.2
SHI03015 Sapria himalayana HOM05D003469 ORTHO05D004084 1.3e-36 159.5 252 37.3
COL.COLO4_25120 Corchorus olitorius HOM05D003469 ORTHO05D004084 3.6e-36 157.9 453 31.1
Aa31LG2G17580 Aethionema arabicum HOM05D003469 ORTHO05D004084 7.6e-34 150.2 81 86.4
Actinidia02459 Actinidia chinensis HOM05D003469 ORTHO05D004084 3.8e-33 147.9 120 58.3
ECA232G2749 Erigeron canadensis HOM05D001807 ORTHO05D002044 9.6e-29 133.3 88 67.0
vmacro23125 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 1.1e-27 129.8 262 32.4
Medtr4g074690 Medicago truncatula HOM05D003469 ORTHO05D004084 1.4e-27 129.4 256 33.2
Cpa.g.sc21.244 Carica papaya HOM05D003469 ORTHO05D004084 9.0e-27 126.7 89 69.7
ATR0002G001 Amborella trichopoda HOM05D003469 ORTHO05D004084 2.6e-26 125.2 84 64.3
Rhsim02G0229800 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.3e-25 122.9 80 72.5
Ca_16140_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 3.2e-24 118.2 161 39.8
SEGI_05114 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 6.0e-23 114.0 140 43.6
Haze_14034 Corylus avellana HOM05D003469 ORTHO05D004084 7.9e-23 113.6 125 44.0
Psat0s3379g0040 Pisum sativum HOM05D003469 ORTHO05D004084 3.3e-21 108.2 108 48.1
QL09p054785 Quercus lobata HOM05D003469 ORTHO05D004084 9.6e-21 106.7 159 45.3
Sp4g05220 Schrenkiella parvula HOM05D003469 ORTHO05D004084 4.8e-20 104.4 53 88.7
Ciclev10020572m.g Citrus clementina HOM05D003469 ORTHO05D004084 4.0e-19 101.3 312 29.2
Aa31LG2G17590 Aethionema arabicum HOM05D003469 ORTHO05D004084 3.4e-18 98.2 55 83.6
Cre10.g464950 Chlamydomonas reinhardtii HOM05D003469 ORTHO05D004084 4.5e-18 97.8 349 25.8
Glyma.07G124800 Glycine max HOM05D003469 ORTHO05D004084 6.5e-17 94.0 158 35.4
Oeu035042.1 Olea europaea HOM05D003469 ORTHO05D004084 1.3e-14 86.3 259 30.9
Sabra13G0107500 Salix brachista HOM05D000001 ORTHO05D000003 3.0e-14 85.1 162 36.4
SHI03013 Sapria himalayana HOM05D003469 ORTHO05D004084 3.9e-14 84.7 91 46.2
Oeu026515.1 Olea europaea HOM05D003469 ORTHO05D004084 4.8e-12 77.8 91 41.8
SEGI_39938 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 8.2e-12 77.0 115 34.8
Haze_14035 Corylus avellana HOM05D003469 ORTHO05D004084 4.1e-11 74.7 112 48.2
Cpa.g.sc21.247 Carica papaya HOM05D003469 ORTHO05D004084 3.4e-10 71.6 117 46.2
Ca_16137_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 3.4e-10 71.6 163 32.5
Lsat_1_v5_gn_0_35341 Lactuca sativa HOM05D003469 ORTHO05D004084 1.7e-09 69.3 132 32.6
Psat0s3379g0080 Pisum sativum HOM05D003469 ORTHO05D004084 8.4e-09 67.0 179 33.0
SEGI_26656 Sequoiadendron giganteum HOM05D003469 ORTHO05D000001 5.5e-08 64.3 131 35.1
Psat0s2166g0160 Pisum sativum HOM05D003469 ORTHO05D004084 2.7e-07 62.0 84 40.5
PRCOL_00004204 Prasinoderma coloniale HOM05D003469 ORTHO05D004084 7.9e-07 60.5 466 22.3


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