Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p12420 Brassica napus HOM05D005601 ORTHO05D007265 6.1e-31 136.7 64 100.0
BraA06t24405Z Brassica rapa HOM05D005601 ORTHO05D007265 3.0e-30 134.4 64 98.4
BcaC05g25566 Brassica carinata HOM05D005601 ORTHO05D007265 5.2e-30 133.7 64 98.4
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 2.9e-20 101.3 102 53.9
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 2.9e-20 101.3 102 53.9
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 2.9e-20 101.3 102 53.9
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 2.9e-20 101.3 102 53.9
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 2.9e-20 101.3 102 53.9
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 2.9e-20 101.3 102 53.9
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 3.7e-20 100.9 102 53.9
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 2.4e-19 98.2 102 52.0
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 9.2e-19 96.3 102 50.0
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 1.0e-17 92.8 102 49.0
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 3.0e-17 91.3 102 50.0
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 5.0e-17 90.5 102 49.0
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 1.5e-16 89.0 102 48.0
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 2.5e-16 88.2 102 46.1
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 4.6e-10 67.4 103 37.9
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 7.8e-10 66.6 104 37.5
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 2.3e-09 65.1 102 36.3
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 3.0e-09 64.7 105 38.1
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 3.0e-09 64.7 105 38.1
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 5.0e-09 63.9 102 37.3
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 6.6e-09 63.5 105 38.1
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 8.6e-09 63.2 103 35.9
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 8.6e-09 63.2 103 35.9
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 2.5e-08 61.6 105 37.1
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 4.3e-08 60.8 99 36.4
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 5.6e-08 60.5 101 34.7
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 5.6e-08 60.5 101 34.7
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 7.3e-08 60.1 101 35.6
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 9.5e-08 59.7 92 37.0
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 2.1e-07 58.5 102 34.3
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 2.1e-07 58.5 101 35.6
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 2.8e-07 58.2 98 32.7
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 4.7e-07 57.4 101 32.7
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 6.2e-07 57.0 102 34.3
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 8.1e-07 56.6 98 32.7
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.1e-06 56.2 97 32.0
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 1.1e-06 56.2 102 35.3
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 2.3e-06 55.1 102 33.3
Cpa.g.sc32.54 Carica papaya HOM05D005601 ORTHO05D007265 3.1e-06 54.7 76 40.8


User provided reference genes

Program Settings