Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p36420 Brassica napus HOM05D004814 ORTHO05D005778 9.0e-102 373.6 193 100.0
BraA05t22442Z Brassica rapa HOM05D004814 ORTHO05D005778 9.3e-99 363.6 193 97.4
Sp3g11290 Schrenkiella parvula HOM05D004814 ORTHO05D005778 4.3e-96 354.8 196 94.9
BcaC05g29209 Brassica carinata HOM05D004814 ORTHO05D005778 2.4e-94 349.0 197 92.9
C05p54820 Brassica napus HOM05D004814 ORTHO05D005778 2.4e-94 349.0 197 92.9
BolC5t34154H Brassica oleracea HOM05D004814 ORTHO05D005778 9.0e-94 347.1 197 92.4
BcaB06g25486 Brassica carinata HOM05D004814 ORTHO05D005778 2.5e-91 339.0 194 93.3
A03p38040 Brassica napus HOM05D004814 ORTHO05D005778 8.2e-87 323.9 195 89.2
BraA03t12957Z Brassica rapa HOM05D004814 ORTHO05D005778 1.4e-86 323.2 199 87.9
Thhalv10021566m.g Eutrema salsugineum HOM05D004814 ORTHO05D005778 6.9e-86 320.9 196 87.8
BcaNung05270 Brassica carinata HOM05D004814 ORTHO05D005778 9.0e-86 320.5 198 86.4
C03p46130 Brassica napus HOM05D004814 ORTHO05D005778 1.1e-83 313.5 198 87.4
BcaC01g04010 Brassica carinata HOM05D004814 ORTHO05D005778 1.4e-83 313.2 198 86.9
BolC3t16886H Brassica oleracea HOM05D004814 ORTHO05D005778 1.4e-83 313.2 198 86.9
A01p40420 Brassica napus HOM05D004814 ORTHO05D005778 5.5e-83 311.2 201 88.1
BraA01t04077Z Brassica rapa HOM05D004814 ORTHO05D005778 5.5e-83 311.2 201 88.1
AT3G13120 Arabidopsis thaliana HOM05D004814 ORTHO05D005778 5.1e-81 304.7 197 86.3
Aa31LG8G330 Aethionema arabicum HOM05D004814 ORTHO05D005778 6.7e-81 304.3 199 84.9
AL3G24860 Arabidopsis lyrata HOM05D004814 ORTHO05D005778 6.3e-79 297.7 197 85.3
Carub.0003s1246 Capsella rubella HOM05D004814 ORTHO05D005778 8.8e-73 277.3 200 79.0
CARHR087710 Cardamine hirsuta HOM05D004814 ORTHO05D005778 1.1e-72 276.9 201 79.6
THA.LOC104815700 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 2.5e-72 275.8 200 78.5
Aa31LG10G250 Aethionema arabicum HOM05D004814 ORTHO05D005778 2.2e-71 272.7 199 79.9
THA.LOC104822735 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 6.9e-70 267.7 199 76.4
THA.LOC104810287 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 2.1e-66 256.1 200 75.0
CANSAT11G0174 Cannabis sativa HOM05D004814 ORTHO05D005778 2.3e-65 252.7 203 72.9
A01p40680 Brassica napus HOM05D004814 ORTHO05D005778 4.4e-64 248.4 195 74.9
Manes.15G061900 Manihot esculenta HOM05D004814 ORTHO05D005778 7.4e-64 247.7 218 66.5
C01p51960 Brassica napus HOM05D004814 ORTHO05D005778 4.1e-62 241.9 177 75.7
Manes.03G139872 Manihot esculenta HOM05D004814 ORTHO05D005778 4.1e-62 241.9 216 64.8
Atru.chr2.3664 Acer truncatum HOM05D004814 ORTHO05D005778 5.3e-62 241.5 194 71.1
DCAR_013223 Daucus carota HOM05D004814 ORTHO05D005778 2.0e-61 239.6 193 69.9
QL08p004842 Quercus lobata HOM05D004814 ORTHO05D005778 3.5e-61 238.8 208 68.3
Potri.011G092800 Populus trichocarpa HOM05D004814 ORTHO05D005778 7.7e-61 237.7 207 65.7
TWI39G1010 Tripterygium wilfordii HOM05D004814 ORTHO05D005778 1.0e-60 237.3 208 66.8
TWI38G0785 Tripterygium wilfordii HOM05D004814 ORTHO05D005778 1.7e-60 236.5 209 67.0
FAN25G3790 Fragaria x ananassa HOM05D004814 ORTHO05D005778 2.9e-60 235.7 199 68.3
Potri.001G365600 Populus trichocarpa HOM05D004814 ORTHO05D005778 2.9e-60 235.7 162 77.8
RcHm_v2.0_Chr5g0054381 Rosa chinensis HOM05D004814 ORTHO05D005778 2.9e-60 235.7 202 66.8
Thecc.07G016800 Theobroma cacao HOM05D004814 ORTHO05D005778 8.5e-60 234.2 193 68.4
GSVIVG01014640001 Vitis vinifera HOM05D004814 ORTHO05D005778 1.1e-59 233.8 205 67.3
Cfa020215 Carpinus fangiana HOM05D004814 ORTHO05D005778 1.5e-59 233.4 210 67.6
CiPaw.12G136400 Carya illinoinensis HOM05D004814 ORTHO05D005778 1.5e-59 233.4 211 65.9
Gorai.007G310400 Gossypium raimondii HOM05D004814 ORTHO05D005778 1.5e-59 233.4 198 67.7
Sabra11G0087000 Salix brachista HOM05D004814 ORTHO05D005778 1.5e-59 233.4 216 64.4
Ciclev10009615m.g Citrus clementina HOM05D004814 ORTHO05D005778 1.9e-59 233.0 194 67.5
Dinv10318 Davidia involucrata HOM05D004814 ORTHO05D005778 1.9e-59 233.0 201 67.2
ClCG09G021040 Citrullus lanatus HOM05D004814 ORTHO05D005778 2.5e-59 232.6 212 63.7
Gohir.D11G287000 Gossypium hirsutum HOM05D004814 ORTHO05D005778 2.5e-59 232.6 198 67.7
MD03G1187000 Malus domestica HOM05D004814 ORTHO05D005778 2.5e-59 232.6 203 67.5
CsaV3_7G018640 Cucumis sativus L. HOM05D004814 ORTHO05D005778 3.2e-59 232.3 212 64.2
FvH4_3g29500 Fragaria vesca HOM05D004814 ORTHO05D005778 3.2e-59 232.3 202 67.3
FAN11G3417 Fragaria x ananassa HOM05D004814 ORTHO05D005778 3.2e-59 232.3 202 67.3
Gohir.A11G276900 Gossypium hirsutum HOM05D004814 ORTHO05D005778 3.2e-59 232.3 200 67.5
Dinv40842 Davidia involucrata HOM05D004814 ORTHO05D005778 4.2e-59 231.9 200 67.5
FAN16G2593 Fragaria x ananassa HOM05D004814 ORTHO05D005778 4.2e-59 231.9 201 66.2
FAN21G1289 Fragaria x ananassa HOM05D004814 ORTHO05D005778 4.2e-59 231.9 202 67.3
MELO3C024899.2 Cucumis melo HOM05D004814 ORTHO05D005778 9.4e-59 230.7 211 64.5
Sabra16G0239200 Salix brachista HOM05D004814 ORTHO05D005778 9.4e-59 230.7 212 64.6
Haze_09803 Corylus avellana HOM05D004814 ORTHO05D005778 1.2e-58 230.3 196 68.4
Lalb_Chr05g0211691 Lupinus albus HOM05D004814 ORTHO05D005778 3.6e-58 228.8 208 66.3
Sc16g0007970 Simmondsia chinensis HOM05D004814 ORTHO05D005778 4.7e-58 228.4 197 67.0
EL10Ac4g07605 Beta vulgaris HOM05D004814 ORTHO05D005778 6.1e-58 228.0 204 66.2
AUR62036421 Chenopodium quinoa HOM05D004814 ORTHO05D005778 6.1e-58 228.0 198 66.7
AUR62036427 Chenopodium quinoa HOM05D004814 ORTHO05D005778 6.1e-58 228.0 198 66.7
AUR62040646 Chenopodium quinoa HOM05D004814 ORTHO05D005778 6.1e-58 228.0 198 66.7
Gohir.A01G090000 Gossypium hirsutum HOM05D004814 ORTHO05D005778 6.1e-58 228.0 197 68.0
AUR62017069 Chenopodium quinoa HOM05D004814 ORTHO05D005778 8.0e-58 227.6 197 66.0
Gohir.D01G075300 Gossypium hirsutum HOM05D004814 ORTHO05D005778 8.0e-58 227.6 197 67.5
Gorai.002G098500 Gossypium raimondii HOM05D004814 ORTHO05D005778 8.0e-58 227.6 197 67.5
CSS0025876 Camellia sinensis var. sinensis HOM05D004814 ORTHO05D005778 1.0e-57 227.3 204 68.1
Ah.06g181280 Amaranthus hybridus HOM05D004814 ORTHO05D005778 1.4e-57 226.9 193 67.9
TAR626G1431 Trochodendron aralioides HOM05D004814 ORTHO05D005778 1.4e-57 226.9 209 65.1
arahy.Tifrunner.gnm1.ann1.X98J9H Arachis hypogaea HOM05D004814 ORTHO05D005778 1.8e-57 226.5 206 64.6
Duzib213G0234 Durio zibethinus HOM05D004814 ORTHO05D005778 1.8e-57 226.5 196 64.8
Actinidia30418 Actinidia chinensis HOM05D004814 ORTHO05D005778 3.0e-57 225.7 200 67.5
arahy.Tifrunner.gnm1.ann1.CWZH2K Arachis hypogaea HOM05D004814 ORTHO05D005778 3.0e-57 225.7 207 63.8
Ah.04g166490 Amaranthus hybridus HOM05D004814 ORTHO05D005778 3.9e-57 225.3 139 84.2
Glyma.18G079900 Glycine max HOM05D004814 ORTHO05D005778 3.9e-57 225.3 209 66.0
vmacro22713 Vaccinium macrocarpon HOM05D004814 ORTHO05D005778 3.9e-57 225.3 202 65.3
arahy.Tifrunner.gnm1.ann1.0CA1AM Arachis hypogaea HOM05D004814 ORTHO05D005778 5.2e-57 224.9 208 64.4
Oeu049351.1 Olea europaea HOM05D004814 ORTHO05D005778 5.2e-57 224.9 195 66.2
COL.COLO4_09806 Corchorus olitorius HOM05D004814 ORTHO05D005778 6.7e-57 224.6 193 64.8
Sed0017349 Sechium edule HOM05D004814 ORTHO05D005778 8.8e-57 224.2 210 63.3
Nitab4.5_0003491g0010 Nicotiana tabacum HOM05D004814 ORTHO05D005778 1.5e-56 223.4 152 77.0
Nn1g03216 Nelumbo nucifera HOM05D004814 ORTHO05D005778 3.3e-56 222.2 208 61.5
arahy.Tifrunner.gnm1.ann1.RG8M6K Arachis hypogaea HOM05D004814 ORTHO05D005778 4.4e-56 221.9 208 64.4
CAN.G492.31 Capsicum annuum HOM05D004814 ORTHO05D005778 4.4e-56 221.9 176 71.0
Hma1.2p1_0889F.1_g232870 Hydrangea macrophylla HOM05D004814 ORTHO05D005778 4.4e-56 221.9 212 63.2
Peaxi162Scf00900g00010 Petunia axillaris HOM05D004814 ORTHO05D005778 4.4e-56 221.9 152 75.0
Lsat_1_v5_gn_9_90400 Lactuca sativa HOM05D004814 ORTHO05D005778 7.4e-56 221.1 195 66.7
Oeu057089.1 Olea europaea HOM05D004814 ORTHO05D005778 7.4e-56 221.1 196 64.3
PGR031G1774 Punica granatum HOM05D004814 ORTHO05D005778 7.4e-56 221.1 197 65.5
Nitab4.5_0006756g0010 Nicotiana tabacum HOM05D004814 ORTHO05D005778 9.7e-56 220.7 190 65.8
Cc05_g14790 Coffea canephora HOM05D004814 ORTHO05D005778 1.3e-55 220.3 193 61.7
Glyma.08G327500 Glycine max HOM05D004814 ORTHO05D005778 1.3e-55 220.3 209 65.6
Sopen10g001990 Solanum pennellii HOM05D004814 ORTHO05D005778 2.2e-55 219.5 197 66.5
MSTRG.14478 Avicennia marina HOM05D004814 ORTHO05D005778 2.8e-55 219.2 195 65.6
Phvul.006G055300 Phaseolus vulgaris HOM05D004814 ORTHO05D005778 2.8e-55 219.2 118 91.5
Ca_20138_v3 Cicer arietinum L. HOM05D004814 ORTHO05D005778 3.7e-55 218.8 206 64.6
ECA240G4731 Erigeron canadensis HOM05D001580 ORTHO05D001517 3.7e-55 218.8 141 80.9
HanXRQChr03g0061321 Helianthus annuus HOM05D004814 ORTHO05D005778 3.7e-55 218.8 196 63.3
Solyc10g006030.3 Solanum lycopersicum HOM05D004814 ORTHO05D005778 3.7e-55 218.8 197 66.5
MD11G1202000 Malus domestica HOM05D004814 ORTHO05D005778 4.8e-55 218.4 200 61.5
Phvul.001G030600 Phaseolus vulgaris HOM05D004814 ORTHO05D005778 4.8e-55 218.4 118 90.7
TAR629G3287 Trochodendron aralioides HOM05D004814 ORTHO05D005778 6.3e-55 218.0 205 62.4
PGSC0003DMG400014378 Solanum tuberosum HOM05D004814 ORTHO05D005778 8.2e-55 217.6 190 64.7
PSO541G0969 Papaver somniferum HOM05D004814 ORTHO05D005778 1.4e-54 216.9 209 64.1
PSO675G8482 Papaver somniferum HOM05D004814 ORTHO05D005778 1.4e-54 216.9 202 61.9
Hund01909 Selenicereus undatus HOM05D004814 ORTHO05D005778 1.4e-54 216.9 195 65.1
Actinidia05019 Actinidia chinensis HOM05D004814 ORTHO05D005778 1.8e-54 216.5 200 65.5
TPR.G30737 Trifolium pratense HOM05D004814 ORTHO05D005778 1.8e-54 216.5 201 63.7
Prupe.4G239600 Prunus persica HOM05D004814 ORTHO05D005778 2.4e-54 216.1 201 63.2
Eucgr.F03697 Eucalyptus grandis HOM05D004814 ORTHO05D005778 9.1e-54 214.2 197 62.4
Rhsim06G0227300 Rhododendron simsii HOM05D004814 ORTHO05D005778 2.0e-53 213.0 205 62.9
Cpa.g.sc12.175 Carica papaya HOM05D004814 ORTHO05D005778 4.5e-53 211.8 104 98.1
HanXRQChr13g0408121 Helianthus annuus HOM05D004814 ORTHO05D005778 1.0e-52 210.7 141 78.0
Medtr3g058430 Medicago truncatula HOM05D004814 ORTHO05D005778 1.0e-52 210.7 197 63.5
CSS0019029 Camellia sinensis var. sinensis HOM05D004814 ORTHO05D005778 1.3e-52 210.3 115 90.4
unitig_62.g23297 Utricularia gibba HOM05D004814 ORTHO05D005778 1.3e-52 210.3 145 77.9
Psat5g170120 Pisum sativum HOM05D004814 ORTHO05D005778 1.7e-52 209.9 196 62.2
Lj1P888T30 Lonicera japonica HOM05D004814 ORTHO05D005778 2.2e-52 209.5 104 97.1
Aqoxy4G02247 Aquilegia oxysepala HOM05D004814 ORTHO05D005778 2.9e-52 209.1 196 62.8
Zm00001eb008100 Zea mays HOM05D004814 ORTHO05D005778 2.9e-52 209.1 186 62.9
VMungo0248G0001 Vigna mungo HOM05D004814 ORTHO05D005778 3.8e-52 208.8 104 96.2
BraA01t04102Z Brassica rapa HOM05D004814 ORTHO05D005778 1.1e-51 207.2 104 97.1
CDE10G1086 Ceratophyllum demersum HOM05D004814 ORTHO05D005778 1.1e-51 207.2 111 89.2
ATR0624G087 Amborella trichopoda HOM05D004814 ORTHO05D005778 1.9e-51 206.5 104 95.2
Zm00001eb401060 Zea mays HOM05D004814 ORTHO05D005778 2.5e-51 206.1 196 60.2
Os03g0196800 Oryza sativa ssp. japonica HOM05D004814 ORTHO05D005778 4.2e-51 205.3 189 60.3
SGA_v2.0_scaffold8G04398 Striga asiatica HOM05D004814 ORTHO05D005778 5.5e-51 204.9 193 61.1
HPP92_020399 Vanilla planifolia HOM05D004814 ORTHO05D005778 2.7e-50 202.6 194 63.4
Actinidia05024 Actinidia chinensis HOM05D004814 ORTHO05D005778 3.6e-50 202.2 193 63.7
QL05p065674 Quercus lobata HOM05D004814 ORTHO05D005778 3.0e-49 199.1 116 86.2
QL05p065593 Quercus lobata HOM05D004814 ORTHO05D005778 1.1e-46 190.7 103 92.2
MBI19_g45743_MAGBIO Magnolia biondii HOM05D004814 ORTHO05D005778 2.4e-46 189.5 100 89.0
AagrBONN_evm.TU.Sc2ySwM_117.1321 Anthoceros agrestis HOM05D004814 ORTHO05D005778 3.2e-43 179.1 104 80.8
PSO832G2117 Papaver somniferum HOM05D004814 ORTHO05D005778 9.4e-43 177.6 208 54.8
Pp3c24_19230 Physcomitrium patens HOM05D004814 ORTHO05D005778 1.8e-41 173.3 123 68.3
Mapoly0009s0107 Marchantia polymorpha HOM05D004814 ORTHO05D005778 2.3e-41 172.9 193 52.3
Pp3c8_18990 Physcomitrium patens HOM05D004814 ORTHO05D005778 1.2e-40 170.6 197 49.2
Pp3c20_8830 Physcomitrium patens HOM05D004814 ORTHO05D005778 1.7e-39 166.8 195 52.3
SEGI_32296 Sequoiadendron giganteum HOM05D004814 ORTHO05D005778 2.7e-37 159.5 101 75.2
CBR_g19640 Chara braunii HOM05D004814 ORTHO05D005778 6.6e-36 154.8 101 69.3
MSTRG.13015 Avicennia marina HOM05D004814 ORTHO05D005778 6.1e-34 148.3 152 59.9
SMO228G0012 Selaginella moellendorffii HOM05D004814 ORTHO05D005778 1.2e-32 144.1 115 60.0
MCO07G521 Micromonas commoda HOM05D004814 ORTHO05D005778 7.0e-30 134.8 120 55.8
PRCOL_00000430 Prasinoderma coloniale HOM05D004814 ORTHO05D005778 1.3e-23 114.0 100 52.0
Cre03.g195650 Chlamydomonas reinhardtii HOM05D004814 ORTHO05D005778 3.0e-20 102.8 100 49.0
BolC1t05144H Brassica oleracea HOM05D004814 ORTHO05D005778 1.9e-19 100.1 106 67.0
vmacro17432 Vaccinium macrocarpon HOM05D004814 ORTHO05D005778 5.4e-06 55.5 204 33.3


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