Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p32180 Brassica napus HOM05D007345 ORTHO05D009277 2.1e-129 465.7 237 100.0
BraA05t22048Z Brassica rapa HOM05D007345 ORTHO05D009277 1.1e-125 453.4 237 97.0
C05p48720 Brassica napus HOM05D007345 ORTHO05D009277 3.3e-122 441.8 237 94.1
BolC5t33608H Brassica oleracea HOM05D007345 ORTHO05D009277 3.3e-122 441.8 237 94.1
BcaB06g25825 Brassica carinata HOM05D007345 ORTHO05D009277 1.6e-116 422.9 237 90.7
Sp3g15810 Schrenkiella parvula HOM05D007345 ORTHO05D009277 2.4e-112 409.1 232 87.9
CARHR093010 Cardamine hirsuta HOM05D007345 ORTHO05D009277 9.9e-111 403.7 237 85.2
Thhalv10021436m.g Eutrema salsugineum HOM05D007345 ORTHO05D009277 2.5e-109 399.1 237 84.8
Carub.0003s1739 Capsella rubella HOM05D007345 ORTHO05D009277 4.2e-109 398.3 237 83.1
AT3G17670 Arabidopsis thaliana HOM05D007345 ORTHO05D009277 7.1e-109 397.5 237 83.5
AL3G30780 Arabidopsis lyrata HOM05D007345 ORTHO05D009277 1.8e-107 392.9 228 84.6
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 7.4e-106 387.5 237 80.6
Ciclev10021617m.g Citrus clementina HOM05D007345 ORTHO05D009277 5.2e-67 258.5 232 56.5
Cpa.g.sc111.41 Carica papaya HOM05D007345 ORTHO05D009277 1.3e-65 253.8 216 56.0
Atru.chr9.353 Acer truncatum HOM05D007345 ORTHO05D009277 2.4e-64 249.6 217 54.4
Sed0020487 Sechium edule HOM05D007345 ORTHO05D009277 1.0e-62 244.2 213 56.3
TAR485G0005 Trochodendron aralioides HOM05D007345 ORTHO05D009277 1.0e-62 244.2 225 52.4
TAR629G2718 Trochodendron aralioides HOM05D007345 ORTHO05D009277 1.7e-62 243.4 225 52.4
FAN04G1809 Fragaria x ananassa HOM05D007345 ORTHO05D009277 3.8e-62 242.3 220 55.5
FAN08G2921 Fragaria x ananassa HOM05D007345 ORTHO05D009277 3.8e-62 242.3 210 56.2
FAN18G3356 Fragaria x ananassa HOM05D007345 ORTHO05D009277 5.0e-62 241.9 210 56.7
TAR629G0192 Trochodendron aralioides HOM05D007345 ORTHO05D009277 1.1e-61 240.7 225 52.0
Eucgr.H00620 Eucalyptus grandis HOM05D007345 ORTHO05D009277 2.5e-61 239.6 233 52.8
GSVIVG01029370001 Vitis vinifera HOM05D007345 ORTHO05D009277 2.5e-61 239.6 210 55.7
CiPaw.16G072000 Carya illinoinensis HOM05D007345 ORTHO05D009277 7.2e-61 238.0 221 52.9
Potri.015G029700 Populus trichocarpa HOM05D007345 ORTHO05D009277 7.2e-61 238.0 224 50.0
RcHm_v2.0_Chr7g0177311 Rosa chinensis HOM05D007345 ORTHO05D009277 7.2e-61 238.0 217 54.8
Ca_17167_v3 Cicer arietinum L. HOM05D007345 ORTHO05D009277 9.4e-61 237.7 232 52.6
LjContig00484g0026271 Lotus japonicus HOM05D007345 ORTHO05D009277 1.2e-60 237.3 223 53.4
Medtr3g015440 Medicago truncatula HOM05D007345 ORTHO05D009277 1.2e-60 237.3 232 50.4
CsaV3_1G005120 Cucumis sativus L. HOM05D007345 ORTHO05D009277 3.6e-60 235.7 211 53.1
PGR083G0906 Punica granatum HOM05D007345 ORTHO05D009277 1.8e-59 233.4 225 52.4
MD06G1238300 Malus domestica HOM05D007345 ORTHO05D009277 2.3e-59 233.0 223 54.3
Thecc.03G072800 Theobroma cacao HOM05D007345 ORTHO05D009277 4.0e-59 232.3 230 50.4
arahy.Tifrunner.gnm1.ann1.TRXD5D Arachis hypogaea HOM05D007345 ORTHO05D009277 5.2e-59 231.9 220 52.7
arahy.Tifrunner.gnm1.ann1.X12NHK Arachis hypogaea HOM05D007345 ORTHO05D009277 5.2e-59 231.9 220 52.7
Lalb_Chr09g0330151 Lupinus albus HOM05D007345 ORTHO05D009277 5.2e-59 231.9 229 51.1
Glyma.05G249000 Glycine max HOM05D007345 ORTHO05D009277 6.8e-59 231.5 212 55.7
Cfa017791 Carpinus fangiana HOM05D007345 ORTHO05D009277 1.2e-58 230.7 233 50.2
COL.COLO4_05810 Corchorus olitorius HOM05D007345 ORTHO05D009277 1.5e-58 230.3 210 53.3
FvH4_5g18270 Fragaria vesca HOM05D007345 ORTHO05D009277 2.0e-58 229.9 202 55.9
Hma1.2p1_0403F.1_g145230 Hydrangea macrophylla HOM05D007345 ORTHO05D009277 2.0e-58 229.9 215 51.6
Dinv13291 Davidia involucrata HOM05D007345 ORTHO05D009277 4.4e-58 228.8 216 50.9
Actinidia35146 Actinidia chinensis HOM05D007345 ORTHO05D009277 5.7e-58 228.4 232 50.4
TWI60G0762 Tripterygium wilfordii HOM05D007345 ORTHO05D009277 7.5e-58 228.0 211 55.5
Prupe.5G242200 Prunus persica HOM05D007345 ORTHO05D009277 1.7e-57 226.9 225 52.9
CANSAT01G1136 Cannabis sativa HOM05D007345 ORTHO05D009277 2.2e-57 226.5 211 53.1
Sabra15G0024900 Salix brachista HOM05D007345 ORTHO05D009277 2.2e-57 226.5 207 51.2
Migut.D02059 Erythranthe guttata HOM05D007345 ORTHO05D009277 6.3e-57 224.9 223 50.7
Sc10g0008500 Simmondsia chinensis HOM05D007345 ORTHO05D009277 8.3e-57 224.6 221 50.2
Cc00_g18760 Coffea canephora HOM05D007345 ORTHO05D009277 1.4e-56 223.8 218 51.8
Oeu061194.1 Olea europaea HOM05D007345 ORTHO05D009277 1.6e-55 220.3 229 48.5
Phvul.002G333600 Phaseolus vulgaris HOM05D007345 ORTHO05D009277 1.6e-55 220.3 215 50.7
EL10Ac8g19438 Beta vulgaris HOM05D007345 ORTHO05D009277 2.7e-55 219.5 238 46.2
CSS0049327 Camellia sinensis var. sinensis HOM05D007345 ORTHO05D009277 1.3e-54 217.2 222 50.0
HanXRQChr13g0409411 Helianthus annuus HOM05D007345 ORTHO05D009277 1.3e-54 217.2 217 50.2
SalBow1G0799 Salvia bowleyana HOM05D007345 ORTHO05D009277 2.3e-54 216.5 244 45.5
ClCG04G012580 Citrullus lanatus HOM05D007345 ORTHO05D009277 2.9e-54 216.1 241 47.7
Haze_18424 Corylus avellana HOM05D007345 ORTHO05D009277 3.8e-54 215.7 202 51.5
Aqoxy3G04287 Aquilegia oxysepala HOM05D007345 ORTHO05D009277 8.6e-54 214.5 216 50.5
Nitab4.5_0004612g0070 Nicotiana tabacum HOM05D000066 ORTHO05D000003 1.1e-53 214.2 203 51.2
Nitab4.5_0000782g0230 Nicotiana tabacum HOM05D000001 ORTHO05D000003 1.5e-53 213.8 208 50.0
Rhsim12G0136700 Rhododendron simsii HOM05D007345 ORTHO05D009277 1.5e-53 213.8 208 51.0
CAN.G1909.2 Capsicum annuum HOM05D007345 ORTHO05D009277 3.3e-53 212.6 219 47.9
Lj5A166T75 Lonicera japonica HOM05D007345 ORTHO05D009277 3.3e-53 212.6 216 50.0
Manes.02G214200 Manihot esculenta HOM05D007345 ORTHO05D009277 7.2e-53 211.5 219 47.0
PSO782G0509 Papaver somniferum HOM05D007345 ORTHO05D009277 1.2e-52 210.7 216 47.2
AUR62033076 Chenopodium quinoa HOM05D007345 ORTHO05D009277 8.0e-52 208.0 216 47.7
Solyc03g098440.4 Solanum lycopersicum HOM05D007345 ORTHO05D009277 1.0e-51 207.6 215 48.4
Peaxi162Scf00171g00331 Petunia axillaris HOM05D007345 ORTHO05D009277 1.8e-51 206.8 203 50.2
unitig_0.g26 Utricularia gibba HOM05D007345 ORTHO05D009277 2.6e-50 203.0 245 42.9
CDE05G0430 Ceratophyllum demersum HOM05D007345 ORTHO05D009277 3.4e-50 202.6 217 45.2
Sopen03g029180 Solanum pennellii HOM05D007345 ORTHO05D009277 3.4e-50 202.6 215 47.9
SGA_v2.0_scaffold164G38118 Striga asiatica HOM05D007345 ORTHO05D009277 2.4e-48 196.4 218 46.8
Lsat_1_v5_gn_3_108980 Lactuca sativa HOM05D007345 ORTHO05D009277 1.6e-47 193.7 217 45.6
VMungo0251G1758 Vigna mungo HOM05D007345 ORTHO05D009277 7.8e-47 191.4 233 47.2
AUR62034041 Chenopodium quinoa HOM05D007345 ORTHO05D009277 1.5e-45 187.2 239 42.3
HPP92_025754 Vanilla planifolia HOM05D007345 ORTHO05D009277 1.0e-43 181.0 222 41.4
HPP92_025712 Vanilla planifolia HOM05D007345 ORTHO05D009277 1.8e-43 180.3 222 41.4
ATR0618G142 Amborella trichopoda HOM05D007345 ORTHO05D009277 2.3e-43 179.9 219 43.8
Os04g0674100 Oryza sativa ssp. japonica HOM05D007345 ORTHO05D009277 8.9e-43 177.9 252 41.3
Nn4g24918 Nelumbo nucifera HOM05D007345 ORTHO05D009277 2.0e-42 176.8 168 52.4
Ah.09g231730 Amaranthus hybridus HOM05D007345 ORTHO05D009277 1.1e-40 171.0 221 41.2
Mapoly0014s0070 Marchantia polymorpha HOM05D007345 ORTHO05D009277 3.2e-40 169.5 218 40.4
SMO352G0035 Selaginella moellendorffii HOM05D007345 ORTHO05D009277 7.0e-40 168.3 233 39.1
Zm00001eb066530 Zea mays HOM05D007345 ORTHO05D009277 1.2e-39 167.5 217 41.0
PGSC0003DMG400010180 Solanum tuberosum HOM05D007345 ORTHO05D009277 3.5e-39 166.0 310 33.5
Pp3c11_25980 Physcomitrium patens HOM05D007345 ORTHO05D009277 6.0e-39 165.2 217 41.0
CBR_g52222 Chara braunii HOM05D007345 ORTHO05D009277 1.7e-38 163.7 215 39.1
DCAR_023255 Daucus carota HOM05D007345 ORTHO05D009277 9.5e-37 157.9 188 43.1
ECA240G0690 Erigeron canadensis HOM05D007345 ORTHO05D009277 3.1e-35 152.9 172 47.1
FAN13G2172 Fragaria x ananassa HOM05D007345 ORTHO05D009277 2.6e-34 149.8 147 53.7
vmacro16392 Vaccinium macrocarpon HOM05D007345 ORTHO05D009277 2.9e-33 146.4 142 50.7
MELO3C001950.2 Cucumis melo HOM05D007345 ORTHO05D009277 1.1e-32 144.4 141 51.1
PSO063G1698 Papaver somniferum HOM05D007345 ORTHO05D009277 6.0e-31 138.7 216 35.6
AagrBONN_evm.TU.Sc2ySwM_117.2683 Anthoceros agrestis HOM05D007345 ORTHO05D009277 3.0e-30 136.3 160 43.8
Psat7g000360 Pisum sativum HOM05D007345 ORTHO05D009277 8.6e-30 134.8 140 52.1
CAN.G1635.20 Capsicum annuum HOM05D007345 ORTHO05D009277 5.6e-29 132.1 210 37.6
SEGI_13495 Sequoiadendron giganteum HOM05D007345 ORTHO05D009277 8.9e-27 124.8 171 40.4
Lj9C350T12 Lonicera japonica HOM05D000001 ORTHO05D009373 9.9e-26 121.3 164 43.3
Eucgr.H00622 Eucalyptus grandis HOM05D007345 ORTHO05D009277 4.6e-23 112.5 99 53.5
MSTRG.9709 Avicennia marina HOM05D007345 ORTHO05D009277 8.6e-22 108.2 135 43.0
Zm00001eb184330 Zea mays HOM05D007345 ORTHO05D009277 1.6e-20 104.0 158 37.3
Cre16.g674534 Chlamydomonas reinhardtii HOM05D007345 ORTHO05D009277 2.0e-18 97.1 203 31.5
PRCOL_00001636 Prasinoderma coloniale HOM05D007345 ORTHO05D009277 1.3e-09 67.8 54 51.9
Hund22393 Selenicereus undatus HOM05D007345 ORTHO05D009277 1.2e-07 61.2 50 56.0
ECA246G2944 Erigeron canadensis HOM05D005920 ORTHO05D007211 3.5e-07 59.7 113 32.7


User provided reference genes

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