Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p21940 Brassica napus HOM05D001018 ORTHO05D000626 1.8e-87 325.9 163 100.0
BNapus_Darmor_BZH_scaffold_107p00020 Brassica napus HOM05D000920 ORTHO05D004854 1.2e-30 137.1 129 59.7
BNapus_Darmor_BZH_scaffold_107p00050 Brassica napus HOM05D000920 ORTHO05D004854 5.9e-30 134.8 127 59.1
A06p24170 Brassica napus HOM05D000920 ORTHO05D000626 5.5e-28 128.3 192 45.8
A09p31370 Brassica napus HOM05D000920 ORTHO05D004854 2.1e-27 126.3 129 57.4
A06p24120 Brassica napus HOM05D001018 ORTHO05D000626 2.3e-26 122.9 67 86.6
A06p24460 Brassica napus HOM05D000920 ORTHO05D004854 2.2e-24 116.3 143 52.4
A05p22480 Brassica napus HOM05D000920 ORTHO05D000626 3.7e-24 115.5 183 43.7
A06p23770 Brassica napus HOM05D000920 ORTHO05D004854 3.7e-24 115.5 62 90.3
A06p26060 Brassica napus HOM05D000920 ORTHO05D004854 3.7e-24 115.5 62 90.3
A04p09260 Brassica napus HOM05D000920 ORTHO05D003704 4.1e-23 112.1 188 42.0
A09p31310 Brassica napus HOM05D000920 ORTHO05D004854 5.9e-22 108.2 138 51.4
A05p22620 Brassica napus HOM05D000920 ORTHO05D004854 1.0e-21 107.5 156 45.5
A06p24570 Brassica napus HOM05D000920 ORTHO05D004854 9.8e-17 90.9 153 41.2
A05p21920 Brassica napus HOM05D000920 ORTHO05D004854 4.6e-14 82.0 49 77.6
A06p25000 Brassica napus HOM05D000920 ORTHO05D004854 3.3e-12 75.9 100 48.0
LjContig00006g0002932 Lotus japonicus HOM05D001018 ORTHO05D002636 8.0e-11 71.2 38 86.8
LjContig00488g0014329 Lotus japonicus HOM05D001018 ORTHO05D002636 8.0e-11 71.2 38 86.8
A05p22280 Brassica napus HOM05D001018 ORTHO05D000626 1.4e-10 70.5 48 72.9
CSS0000564 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 1.4e-10 70.5 38 86.8
A05p22360 Brassica napus HOM05D001018 ORTHO05D000626 4.0e-10 68.9 53 67.9
Migut.A01193 Erythranthe guttata HOM05D001018 ORTHO05D000626 6.8e-10 68.2 38 81.6
CSS0041698 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 1.2e-09 67.4 36 86.1
Sed0017842 Sechium edule HOM05D001018 ORTHO05D000626 1.5e-09 67.0 38 81.6
Atru.chr6.2695 Acer truncatum HOM05D001018 ORTHO05D000626 2.0e-09 66.6 38 81.6
ScUNg0001590 Simmondsia chinensis HOM05D001018 ORTHO05D000626 2.0e-09 66.6 38 81.6
ScUNg0001640 Simmondsia chinensis HOM05D001018 ORTHO05D000626 2.0e-09 66.6 38 81.6
Sopen00g002220 Solanum pennellii HOM05D001018 ORTHO05D000626 2.0e-09 66.6 38 81.6
Sopen00g013130 Solanum pennellii HOM05D001018 ORTHO05D000626 2.0e-09 66.6 38 81.6
PGSC0003DMG402019042 Solanum tuberosum HOM05D001018 ORTHO05D000626 2.0e-09 66.6 38 81.6
Migut.A01079 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.6e-09 66.2 38 81.6
Migut.A01232 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.6e-09 66.2 38 81.6
Migut.A01234 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.6e-09 66.2 38 81.6
Migut.A01240 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.6e-09 66.2 38 81.6
Migut.A01241 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.6e-09 66.2 38 81.6
Migut.A01245 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.6e-09 66.2 38 81.6
Migut.G00890 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.6e-09 66.2 38 81.6
Manes.15G193301 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.18G143401 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S001635 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S003597 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S004905 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S005886 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S007848 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S011772 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S015696 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S017986 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S020275 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S024052 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S024852 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S025016 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S026216 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S026252 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S026952 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S027016 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S027516 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S029252 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S029752 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S030016 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S030252 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S031516 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S031716 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S032416 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S032916 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S033816 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S034816 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S035416 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S036516 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S036816 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S037516 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S039116 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S041116 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S041816 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S043216 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S043916 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S045216 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S046916 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S048416 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S049316 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S051116 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S051616 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S052516 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S053016 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S053216 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Manes.S054816 Manihot esculenta HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
QL11p027314 Quercus lobata HOM05D001018 ORTHO05D000626 3.4e-09 65.9 38 81.6
Migut.A01194 Erythranthe guttata HOM05D001018 ORTHO05D000626 4.4e-09 65.5 38 78.9
Gorai.001G276600 Gossypium raimondii HOM05D001018 ORTHO05D000626 5.8e-09 65.1 38 81.6
Gorai.001G276700 Gossypium raimondii HOM05D001018 ORTHO05D000626 5.8e-09 65.1 38 81.6
Gorai.001G276800 Gossypium raimondii HOM05D001018 ORTHO05D000626 5.8e-09 65.1 38 81.6
Migut.A01196 Erythranthe guttata HOM05D001018 ORTHO05D000626 7.5e-09 64.7 38 78.9
CiPaw.05G153900 Carya illinoinensis HOM05D001018 ORTHO05D000626 9.8e-09 64.3 38 78.9
CiPaw.05G154900 Carya illinoinensis HOM05D001018 ORTHO05D000626 9.8e-09 64.3 38 78.9
CiPaw.05G155900 Carya illinoinensis HOM05D001018 ORTHO05D000626 9.8e-09 64.3 38 78.9
CiPaw.05G156000 Carya illinoinensis HOM05D001018 ORTHO05D000626 9.8e-09 64.3 38 78.9
CiPaw.15G103300 Carya illinoinensis HOM05D001018 ORTHO05D000626 9.8e-09 64.3 38 78.9
Migut.C00303 Erythranthe guttata HOM05D001018 ORTHO05D000626 9.8e-09 64.3 37 81.1
Glyma.U009202 Glycine max HOM05D001018 ORTHO05D000626 9.8e-09 64.3 38 78.9
Potri.008G224210 Populus trichocarpa HOM05D001018 ORTHO05D000626 9.8e-09 64.3 38 78.9
Potri.014G185588 Populus trichocarpa HOM05D001018 ORTHO05D000626 9.8e-09 64.3 38 78.9
Potri.014G185804 Populus trichocarpa HOM05D001018 ORTHO05D000626 9.8e-09 64.3 38 78.9
Potri.014G186452 Populus trichocarpa HOM05D001018 ORTHO05D000626 9.8e-09 64.3 38 78.9
CSS0020036 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 1.3e-08 63.9 38 78.9
Manes.S033916 Manihot esculenta HOM05D001018 ORTHO05D000626 1.3e-08 63.9 37 81.1
CiPaw.15G105700 Carya illinoinensis HOM05D001018 ORTHO05D000626 1.7e-08 63.5 36 80.6
Manes.S028116 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-08 63.5 38 78.9
BNapus_Darmor_BZH_scaffold_107p00550 Brassica napus HOM05D000920 ORTHO05D004854 2.2e-08 63.2 39 76.9
CSS0025197 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 2.9e-08 62.8 38 81.6
CSS0050263 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 2.9e-08 62.8 34 85.3
Atru.chr10.41 Acer truncatum HOM05D001018 ORTHO05D000626 4.9e-08 62.0 38 78.9
CSS0026871 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 4.9e-08 62.0 36 83.3
CiPaw.15G104700 Carya illinoinensis HOM05D001018 ORTHO05D000626 4.9e-08 62.0 38 76.3
Sopen07g009480 Solanum pennellii HOM05D001018 ORTHO05D000626 4.9e-08 62.0 38 76.3
A06p24760 Brassica napus HOM05D000920 ORTHO05D004854 6.4e-08 61.6 88 45.5
unitig_581.g33720 Utricularia gibba HOM05D001018 ORTHO05D000626 6.4e-08 61.6 38 76.3
unitig_670.g34683 Utricularia gibba HOM05D001018 ORTHO05D000626 6.4e-08 61.6 38 76.3
Cpa.g.sc2112.2 Carica papaya HOM05D001018 ORTHO05D000626 1.1e-07 60.8 38 76.3
A05p22350 Brassica napus HOM05D000920 ORTHO05D004854 1.4e-07 60.5 60 55.0
Zm00001eb441190 Zea mays HOM05D001018 ORTHO05D000626 3.2e-07 59.3 37 81.1
Zm00001eb263830 Zea mays HOM05D010106 ORTHO05D000626 5.4e-07 58.5 67 46.3
A05p22020 Brassica napus HOM05D000920 ORTHO05D004854 7.1e-07 58.2 91 42.9
unitig_579.g34807 Utricularia gibba HOM05D001018 ORTHO05D000626 7.1e-07 58.2 32 84.4
unitig_579.g34818 Utricularia gibba HOM05D001018 ORTHO05D000626 7.1e-07 58.2 32 84.4
Zm00001eb264030 Zea mays HOM05D001018 ORTHO05D000626 1.6e-06 57.0 51 66.7
Zm00001eb440240 Zea mays HOM05D001018 ORTHO05D000626 1.6e-06 57.0 33 84.8
Lj5g0000109 Lotus japonicus HOM05D000920 ORTHO05D000626 2.7e-06 56.2 55 54.5
LjContig00488g0002218 Lotus japonicus HOM05D000920 ORTHO05D000626 2.7e-06 56.2 55 54.5
unitig_678.g33163 Utricularia gibba HOM05D001018 ORTHO05D000626 4.6e-06 55.5 29 86.2


User provided reference genes

Program Settings