Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p21480 Brassica napus HOM05D001038 ORTHO05D032193 2.5e-49 198.4 94 100.0
BraA05t21066Z Brassica rapa HOM05D001038 ORTHO05D032193 2.5e-49 198.4 94 100.0
C05p37200 Brassica napus HOM05D001038 ORTHO05D017560 7.1e-36 153.7 85 90.6
BcaB08g35416 Brassica carinata HOM05D001038 ORTHO05D017560 7.1e-28 127.1 85 71.8
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-26 122.9 85 68.2
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 4.5e-22 107.8 86 60.5
C02p52080 Brassica napus HOM05D001038 ORTHO05D019962 1.0e-21 106.7 93 54.8
BolC2t11293H Brassica oleracea HOM05D001038 ORTHO05D019962 1.0e-21 106.7 93 54.8
BraA06t25412Z Brassica rapa HOM05D001038 ORTHO05D017560 1.1e-20 103.2 86 54.7
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 2.1e-19 99.0 86 55.8
C09p39680 Brassica napus HOM05D001038 ORTHO05D010763 2.1e-19 99.0 86 55.8
C09p35780 Brassica napus HOM05D001038 ORTHO05D000395 2.7e-19 98.6 56 85.7
BolC9t56412H Brassica oleracea HOM05D001038 ORTHO05D000395 2.7e-19 98.6 56 85.7
C09p12400 Brassica napus HOM05D001038 ORTHO05D019962 1.3e-18 96.3 101 50.5
BcaB04g19629 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-18 95.1 87 51.7
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-16 89.0 71 57.7
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 3.4e-14 81.6 86 47.7
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 4.5e-14 81.3 86 46.5
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 8.5e-13 77.0 86 48.8
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 7.2e-12 73.9 58 56.9
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-10 68.9 78 43.6
BcaB01g00119 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-10 68.6 57 59.6
BcaC04g23074 Brassica carinata HOM05D001038 ORTHO05D019962 5.1e-10 67.8 57 56.1
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 5.1e-10 67.8 85 44.7
C06p10570 Brassica napus HOM05D001038 ORTHO05D014932 5.1e-10 67.8 85 44.7
BolC7t41626H Brassica oleracea HOM05D001038 ORTHO05D014932 6.7e-10 67.4 85 43.5
BolC9t54134H Brassica oleracea HOM05D001038 ORTHO05D019962 6.7e-10 67.4 57 54.4
BcaC08g46978 Brassica carinata HOM05D001038 ORTHO05D032193 1.5e-09 66.2 56 53.6
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-09 66.2 86 39.5
BraA02t08905Z Brassica rapa HOM05D001038 ORTHO05D033175 2.0e-09 65.9 56 48.2
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 2.5e-09 65.5 85 42.4
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 3.3e-09 65.1 56 53.6
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 3.3e-09 65.1 86 40.7
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-08 63.2 64 45.3
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-08 63.2 85 43.5
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-08 62.8 85 41.2
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-08 62.8 85 41.2
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 1.7e-08 62.8 85 41.2
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 1.7e-08 62.8 86 41.9
BraA06t25336Z Brassica rapa HOM05D001038 ORTHO05D028293 1.7e-08 62.8 86 37.2
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-08 62.0 85 38.8
A05p27890 Brassica napus HOM05D005627 ORTHO05D028293 2.8e-08 62.0 86 38.4
BraA01t02127Z Brassica rapa HOM05D001038 ORTHO05D019962 2.8e-08 62.0 59 49.2
C08p05940 Brassica napus HOM05D001038 ORTHO05D024385 3.7e-08 61.6 86 39.5
C09p42070 Brassica napus HOM05D001038 ORTHO05D021947 3.7e-08 61.6 86 37.2
A07p02760 Brassica napus HOM05D005627 ORTHO05D028293 4.8e-08 61.2 86 37.2
C07p09720 Brassica napus HOM05D001038 ORTHO05D010763 4.8e-08 61.2 86 39.5
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 4.8e-08 61.2 85 41.2
BraA07t28076Z Brassica rapa HOM05D001038 ORTHO05D028293 4.8e-08 61.2 86 37.2
BolC7t41410H Brassica oleracea HOM05D001038 ORTHO05D010763 6.3e-08 60.8 89 42.7
C07p12170 Brassica napus HOM05D001038 ORTHO05D010763 1.1e-07 60.1 86 38.4
BcaB06g28161 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-07 59.3 86 34.9
BcaC05g26744 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-07 59.3 86 34.9
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 2.4e-07 58.9 85 40.0
BraA01t02230Z Brassica rapa HOM05D001038 ORTHO05D000395 2.4e-07 58.9 85 40.0
A09p28390 Brassica napus HOM05D001038 ORTHO05D000395 5.3e-07 57.8 57 47.4
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 5.3e-07 57.8 86 33.7
BraA02t08689Z Brassica rapa HOM05D001038 ORTHO05D010763 5.3e-07 57.8 85 36.5
BcaB02g10814 Brassica carinata HOM05D001038 ORTHO05D010946 6.9e-07 57.4 85 40.0
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 6.9e-07 57.4 86 34.9
BolC2t11143H Brassica oleracea HOM05D001038 ORTHO05D024385 6.9e-07 57.4 86 37.2
BcaB03g16620 Brassica carinata HOM05D001038 ORTHO05D000395 9.1e-07 57.0 85 38.8
BcaB08g34782 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-06 56.6 55 43.6
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-06 56.6 85 38.8
C07p11760 Brassica napus HOM05D001038 ORTHO05D024045 1.5e-06 56.2 90 32.2
BcaC04g22987 Brassica carinata HOM05D062974 ORTHO05D000395 2.0e-06 55.8 78 43.6
A06p10190 Brassica napus HOM05D001038 ORTHO05D014932 2.6e-06 55.5 88 43.2
C01p11550 Brassica napus HOM05D001038 ORTHO05D040626 2.6e-06 55.5 54 46.3
A03p31860 Brassica napus HOM05D001038 ORTHO05D024045 3.4e-06 55.1 85 36.5
A03p51100 Brassica napus HOM05D001038 ORTHO05D024045 3.4e-06 55.1 85 36.5
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 3.4e-06 55.1 85 37.6
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 4.5e-06 54.7 85 37.6
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 5.9e-06 54.3 85 40.0
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 7.7e-06 53.9 89 37.1


User provided reference genes

Program Settings