Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 7.1e-177 624.0 358 100.0
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 1.6e-160 569.7 369 90.5
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 5.6e-150 534.6 367 88.6
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 8.2e-149 530.8 358 89.7
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 2.1e-144 516.2 357 85.7
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 6.1e-136 488.0 362 83.4
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 5.9e-131 471.5 365 80.8
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 5.0e-130 468.4 326 88.7
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 8.8e-119 431.0 367 75.7
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 2.9e-114 416.0 374 73.8
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 3.0e-111 406.0 359 76.9
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 2.6e-110 402.9 361 76.2
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 1.2e-104 384.0 366 69.1
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 8.3e-93 344.7 291 68.0
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 4.0e-79 299.3 286 60.1
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 8.3e-77 291.6 291 58.4
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 3.2e-76 289.7 369 52.6
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 7.0e-76 288.5 291 58.8
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 1.6e-75 287.3 383 51.7
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 5.6e-73 278.9 361 55.7
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 2.8e-72 276.6 288 56.6
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 3.6e-72 276.2 360 55.8
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 3.6e-72 276.2 284 54.9
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 2.3e-71 273.5 285 57.9
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 5.2e-71 272.3 365 52.9
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 6.8e-71 271.9 348 55.2
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 3.4e-70 269.6 300 54.3
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 3.4e-70 269.6 289 55.0
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 4.4e-70 269.2 358 51.1
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 4.4e-70 269.2 291 54.3
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 7.5e-70 268.5 287 54.4
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.3e-69 267.7 287 52.3
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 2.2e-69 266.9 294 52.4
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 2.9e-69 266.5 288 55.6
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 1.1e-68 264.6 289 54.7
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 2.4e-68 263.5 286 53.8
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 4.1e-68 262.7 362 48.3
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 4.1e-68 262.7 275 55.3
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 1.2e-67 261.2 370 52.7
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 1.6e-67 260.8 275 55.6
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 2.1e-67 260.4 286 52.1
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 4.6e-67 259.2 289 52.2
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 7.8e-67 258.5 299 51.2
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 7.8e-67 258.5 300 51.3
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 2.3e-66 256.9 277 54.5
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 2.3e-66 256.9 289 54.3
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 3.0e-66 256.5 277 53.8
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 3.9e-66 256.1 278 54.7
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 5.1e-66 255.8 278 54.7
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 1.1e-65 254.6 295 52.5
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.9e-65 253.8 307 51.8
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 1.9e-65 253.8 291 50.9
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 1.9e-65 253.8 368 54.6
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 3.3e-65 253.1 302 50.7
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 4.3e-65 252.7 290 50.3
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 5.6e-65 252.3 287 51.2
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 2.1e-64 250.4 259 54.8
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 2.8e-64 250.0 372 50.5
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.1e-63 248.1 300 46.7
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 3.1e-63 246.5 282 51.4
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 3.4e-62 243.0 261 55.2
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 4.4e-62 242.7 292 49.7
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 4.4e-62 242.7 372 47.8
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 5.8e-62 242.3 307 50.5
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 9.9e-62 241.5 278 51.4
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 6.4e-61 238.8 285 50.9
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 1.1e-60 238.0 261 53.6
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 1.2e-59 234.6 290 49.7
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 2.1e-59 233.8 286 50.7
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 6.0e-59 232.3 347 50.1
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 7.8e-59 231.9 275 53.1
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 7.8e-59 231.9 283 49.1
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 7.8e-59 231.9 259 53.7
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 1.0e-58 231.5 293 47.8
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 1.0e-58 231.5 359 48.2
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 1.9e-57 227.3 289 47.1
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 9.6e-57 224.9 279 48.7
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 1.6e-56 224.2 355 43.1
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 8.1e-56 221.9 351 50.7
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 2.4e-55 220.3 272 49.3
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 3.1e-55 219.9 271 50.6
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 6.9e-55 218.8 277 48.0
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 1.5e-54 217.6 264 50.4
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 2.6e-54 216.9 271 50.9
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 5.8e-54 215.7 286 45.1
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 5.8e-54 215.7 498 33.5
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 2.2e-53 213.8 330 42.1
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 2.9e-53 213.4 216 54.6
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 8.4e-53 211.8 293 45.4
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 8.4e-53 211.8 213 55.9
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 8.4e-53 211.8 274 46.7
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.1e-52 211.5 273 48.7
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 1.1e-52 211.5 255 48.6
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 1.9e-52 210.7 262 48.9
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 1.1e-49 201.4 288 44.1
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 3.3e-49 199.9 340 40.3
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 7.3e-49 198.7 279 44.1
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 9.6e-49 198.4 280 44.3
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 3.1e-47 193.4 244 47.5
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 2.6e-46 190.3 299 42.8
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 2.9e-45 186.8 285 42.1
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 3.8e-45 186.4 279 40.5
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 6.7e-42 175.6 168 57.7
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 8.1e-40 168.7 332 36.1
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 1.1e-39 168.3 172 52.3
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 9.0e-39 165.2 255 44.3
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 2.9e-37 160.2 224 43.3
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 2.5e-33 147.1 201 44.3
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 2.8e-32 143.7 286 45.1
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 4.0e-31 139.8 246 35.0
BolC4t27428H Brassica oleracea HOM05D006271 ORTHO05D023853 3.4e-30 136.7 213 48.4
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 2.9e-29 133.7 289 37.4
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 4.9e-29 132.9 262 37.0
C04p59170 Brassica napus HOM05D006271 ORTHO05D023853 1.4e-28 131.3 213 46.9
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 2.5e-28 130.6 181 48.1
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 3.5e-27 126.7 203 41.9
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 2.8e-24 117.1 105 68.6
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 6.9e-23 112.5 300 34.7
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 2.5e-20 104.0 80 61.2
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 5.1e-18 96.3 94 52.1
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 1.5e-17 94.7 268 31.7
A04p23050 Brassica napus HOM05D006271 ORTHO05D023853 2.0e-14 84.3 207 37.7
BcaB05g24172 Brassica carinata HOM05D000064 ORTHO05D094673 2.9e-13 80.5 134 43.3
PSO170G2099 Papaver somniferum HOM05D006271 ORTHO05D008237 5.5e-12 76.3 207 31.4
PSO017G3993 Papaver somniferum HOM05D006271 ORTHO05D008237 7.2e-12 75.9 207 30.9
Sp6g37300 Schrenkiella parvula HOM05D006271 ORTHO05D008237 1.5e-09 68.2 172 42.4
BraA04t17838Z Brassica rapa HOM05D006271 ORTHO05D023853 3.7e-08 63.5 108 46.3
BcaC02g08034 Brassica carinata HOM05D006271 ORTHO05D023853 5.9e-06 56.2 118 39.0


User provided reference genes

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