Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p33960 Brassica napus HOM05D006419 ORTHO05D008096 5.4e-56 220.7 108 100.0
BcaB06g29431 Brassica carinata HOM05D006419 ORTHO05D008096 4.5e-26 121.3 61 93.4
Thhalv10001692m.g Eutrema salsugineum HOM05D006419 ORTHO05D008096 4.5e-26 121.3 61 91.8
Sp4g27740 Schrenkiella parvula HOM05D006419 ORTHO05D008096 4.5e-26 121.3 61 91.8
BcaB01g03257 Brassica carinata HOM05D006419 ORTHO05D008096 5.9e-26 120.9 61 90.2
CARHR140920 Cardamine hirsuta HOM05D006419 ORTHO05D008096 2.5e-24 115.5 61 86.9
AL4G44870 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 3.2e-24 115.2 63 87.3
AT2G45695 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 3.2e-24 115.2 63 87.3
THA.LOC104802008 Tarenaya hassleriana HOM05D006419 ORTHO05D008096 3.2e-24 115.2 61 88.5
Carub.0004s2835 Capsella rubella HOM05D006419 ORTHO05D008096 4.2e-24 114.8 63 87.3
BcaC01g05111 Brassica carinata HOM05D006419 ORTHO05D008096 5.5e-24 114.4 61 86.9
A03p25320 Brassica napus HOM05D006419 ORTHO05D008096 5.5e-24 114.4 61 86.9
C03p30210 Brassica napus HOM05D006419 ORTHO05D008096 5.5e-24 114.4 61 86.9
BolC3t15370H Brassica oleracea HOM05D006419 ORTHO05D008096 5.5e-24 114.4 61 86.9
BraA03t11736Z Brassica rapa HOM05D006419 ORTHO05D008096 9.4e-24 113.6 61 86.9
SGA_v2.0_scaffold486G52389 Striga asiatica HOM05D006419 ORTHO05D008096 6.1e-23 110.9 105 57.1
arahy.Tifrunner.gnm1.ann1.PAP2UH Arachis hypogaea HOM05D006419 ORTHO05D008096 1.4e-22 109.8 61 83.6
Phvul.010G089300 Phaseolus vulgaris HOM05D006419 ORTHO05D008096 1.4e-22 109.8 61 83.6
Aa31LG1G27170 Aethionema arabicum HOM05D006419 ORTHO05D008096 3.9e-22 108.2 61 83.6
Lsat_1_v5_gn_8_87621 Lactuca sativa HOM05D006419 ORTHO05D008096 3.9e-22 108.2 61 83.6
Lalb_Chr10g0097581 Lupinus albus HOM05D006419 ORTHO05D008096 3.9e-22 108.2 61 83.6
Lalb_Chr17g0340031 Lupinus albus HOM05D006419 ORTHO05D008096 3.9e-22 108.2 61 83.6
arahy.Tifrunner.gnm1.ann1.V3JJAU Arachis hypogaea HOM05D006419 ORTHO05D008096 5.1e-22 107.8 61 83.6
Lj1g0008204 Lotus japonicus HOM05D006419 ORTHO05D008096 5.1e-22 107.8 61 83.6
HanXRQChr04g0126261 Helianthus annuus HOM05D006419 ORTHO05D008096 8.8e-22 107.1 61 82.0
Ca_23766_v3 Cicer arietinum L. HOM05D006419 ORTHO05D008096 1.1e-21 106.7 61 82.0
ECA236G2030 Erigeron canadensis HOM05D002941 ORTHO05D007802 2.6e-21 105.5 61 83.6
Aqoxy7G00481 Aquilegia oxysepala HOM05D006419 ORTHO05D008096 3.3e-21 105.1 61 82.0
AL5G43350 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 3.3e-21 105.1 61 80.3
Duzib133G0791 Durio zibethinus HOM05D006419 ORTHO05D008096 3.3e-21 105.1 61 78.7
Hund09553 Selenicereus undatus HOM05D006419 ORTHO05D008096 4.4e-21 104.8 72 72.2
SGA_v2.0_scaffold24G10498 Striga asiatica HOM05D006419 ORTHO05D008096 4.4e-21 104.8 61 83.6
AT3G61113 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 5.7e-21 104.4 61 82.0
VMungo0331G1339 Vigna mungo HOM05D006419 ORTHO05D008096 5.7e-21 104.4 65 75.4
Glyma.07G080100 Glycine max HOM05D006419 ORTHO05D008096 9.7e-21 103.6 61 78.7
QL08p050901 Quercus lobata HOM05D006419 ORTHO05D008096 9.7e-21 103.6 61 78.7
Thecc.01G370100 Theobroma cacao HOM05D006419 ORTHO05D008096 9.7e-21 103.6 61 75.4
TPR.G17971 Trifolium pratense HOM05D006419 ORTHO05D008096 9.7e-21 103.6 63 81.0
Duzib138G0401 Durio zibethinus HOM05D006419 ORTHO05D008096 1.3e-20 103.2 61 77.0
Cc02_g37090 Coffea canephora HOM05D006419 ORTHO05D008096 1.7e-20 102.8 61 80.3
Nitab4.5_0001127g0020 Nicotiana tabacum HOM05D006419 ORTHO05D008096 1.7e-20 102.8 61 78.7
Hund16966 Selenicereus undatus HOM05D006419 ORTHO05D008096 1.7e-20 102.8 61 78.7
Sc23g0003380 Simmondsia chinensis HOM05D006419 ORTHO05D008096 1.7e-20 102.8 61 78.7
Gohir.D11G088500 Gossypium hirsutum HOM05D006419 ORTHO05D008096 2.2e-20 102.4 61 77.0
Gorai.007G094600 Gossypium raimondii HOM05D006419 ORTHO05D008096 2.2e-20 102.4 61 77.0
unitig_37.g12884 Utricularia gibba HOM05D006419 ORTHO05D008096 2.2e-20 102.4 64 76.6
Actinidia31456 Actinidia chinensis HOM05D006419 ORTHO05D008096 2.8e-20 102.1 61 78.7
Hma1.2p1_0132F.1_g060780 Hydrangea macrophylla HOM05D006419 ORTHO05D008096 2.8e-20 102.1 61 80.3
Nitab4.5_0013229g0010 Nicotiana tabacum HOM05D006419 ORTHO05D008096 2.8e-20 102.1 61 77.0
Rhsim07G0022300 Rhododendron simsii HOM05D006419 ORTHO05D008096 2.8e-20 102.1 62 80.6
GSVIVG01027592001 Vitis vinifera HOM05D006419 ORTHO05D008096 2.8e-20 102.1 61 80.3
COL.COLO4_12638 Corchorus olitorius HOM05D006419 ORTHO05D008096 3.7e-20 101.7 61 78.7
MBI04_g28569_MAGBIO Magnolia biondii HOM05D006419 ORTHO05D008096 3.7e-20 101.7 61 78.7
Nn6g34296 Nelumbo nucifera HOM05D006419 ORTHO05D008096 3.7e-20 101.7 61 77.0
PGSC0003DMG400000132 Solanum tuberosum HOM05D006419 ORTHO05D008096 3.7e-20 101.7 61 77.0
Actinidia09582 Actinidia chinensis HOM05D006419 ORTHO05D008096 4.8e-20 101.3 61 78.7
Manes.01G263100 Manihot esculenta HOM05D006419 ORTHO05D008096 4.8e-20 101.3 61 73.8
SalBow8G2260 Salvia bowleyana HOM05D006419 ORTHO05D008096 4.8e-20 101.3 61 80.3
TWI59G0287 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 4.8e-20 101.3 61 78.7
ClCG06G000160 Citrullus lanatus HOM05D006419 ORTHO05D008096 6.3e-20 100.9 61 78.7
Migut.C01180 Erythranthe guttata HOM05D006419 ORTHO05D008096 6.3e-20 100.9 61 80.3
Prupe.1G200200 Prunus persica HOM05D006419 ORTHO05D008096 6.3e-20 100.9 61 77.0
PGR042G1692 Punica granatum HOM05D006419 ORTHO05D008096 6.3e-20 100.9 61 75.4
CANSAT56G1223 Cannabis sativa HOM05D006419 ORTHO05D008096 8.2e-20 100.5 61 77.0
Medtr8g032860 Medicago truncatula HOM05D006419 ORTHO05D008096 8.2e-20 100.5 63 79.4
Peaxi162Scf00021g00237 Petunia axillaris HOM05D006419 ORTHO05D008096 8.2e-20 100.5 61 77.0
Solyc01g091890.3 Solanum lycopersicum HOM05D006419 ORTHO05D008096 8.2e-20 100.5 61 77.0
Sopen01g037660 Solanum pennellii HOM05D006419 ORTHO05D008096 8.2e-20 100.5 61 77.0
Eucgr.E01325 Eucalyptus grandis HOM05D006419 ORTHO05D008096 1.1e-19 100.1 73 68.5
Oeu032965.1 Olea europaea HOM05D006419 ORTHO05D008096 1.1e-19 100.1 61 75.4
MSTRG.1480 Avicennia marina HOM05D006419 ORTHO05D008096 1.4e-19 99.8 62 79.0
Haze_16703 Corylus avellana HOM05D006419 ORTHO05D008096 1.4e-19 99.8 61 75.4
Gohir.A11G084400 Gossypium hirsutum HOM05D006419 ORTHO05D008096 1.4e-19 99.8 61 75.4
Sed0009830 Sechium edule HOM05D006419 ORTHO05D008096 1.4e-19 99.8 61 78.7
Psat4g151440 Pisum sativum HOM05D006419 ORTHO05D008096 1.8e-19 99.4 63 77.8
Cfa001844 Carpinus fangiana HOM05D006419 ORTHO05D008096 2.4e-19 99.0 61 75.4
Atru.chr5.383 Acer truncatum HOM05D006419 ORTHO05D008096 3.1e-19 98.6 61 77.0
Dinv32413 Davidia involucrata HOM05D006419 ORTHO05D008096 5.3e-19 97.8 61 77.0
Oeu050256.1 Olea europaea HOM05D006419 ORTHO05D008096 5.3e-19 97.8 61 75.4
CiPaw.01G257500 Carya illinoinensis HOM05D006419 ORTHO05D008096 6.9e-19 97.4 61 77.0
CsaV3_6G005910 Cucumis sativus L. HOM05D006419 ORTHO05D008096 9.1e-19 97.1 64 73.4
TWI14G0146 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 9.1e-19 97.1 61 75.4
MELO3C022522.2 Cucumis melo HOM05D006419 ORTHO05D008096 1.5e-18 96.3 61 75.4
Dinv43747 Davidia involucrata HOM05D006419 ORTHO05D008096 1.5e-18 96.3 61 77.0
EL10Ac1g00975 Beta vulgaris HOM05D006419 ORTHO05D008096 2.0e-18 95.9 62 77.4
FvH4_1g27190 Fragaria vesca HOM05D006419 ORTHO05D008096 2.0e-18 95.9 61 72.1
RcHm_v2.0_Chr3g0487581 Rosa chinensis HOM05D006419 ORTHO05D008096 2.0e-18 95.9 61 72.1
Glyma.03G018600 Glycine max HOM05D006419 ORTHO05D008096 2.6e-18 95.5 61 75.4
MD04G1046600 Malus domestica HOM05D006419 ORTHO05D008096 3.4e-18 95.1 61 75.4
MSTRG.25406 Avicennia marina HOM05D006419 ORTHO05D008096 4.5e-18 94.7 61 77.0
Ciclev10023026m.g Citrus clementina HOM05D006419 ORTHO05D008096 4.5e-18 94.7 61 73.8
PSO478G5220 Papaver somniferum HOM05D006419 ORTHO05D008096 7.7e-18 94.0 61 77.0
vmacro20977 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 7.7e-18 94.0 61 72.1
Ah.15g094110 Amaranthus hybridus HOM05D006419 ORTHO05D008096 1.0e-17 93.6 75 62.7
CAN.G170.61 Capsicum annuum HOM05D006419 ORTHO05D008096 1.0e-17 93.6 73 64.4
TAR375G0946 Trochodendron aralioides HOM05D006419 ORTHO05D008096 1.0e-17 93.6 61 77.0
TAR636G0701 Trochodendron aralioides HOM05D006419 ORTHO05D008096 1.3e-17 93.2 61 72.1
PSO782G1455 Papaver somniferum HOM05D006419 ORTHO05D008096 2.2e-17 92.4 61 73.8
Sabra14G0054000 Salix brachista HOM05D006419 ORTHO05D008096 6.5e-17 90.9 62 77.4
vmacro13347 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 1.1e-16 90.1 74 64.9
BraA04t18857Z Brassica rapa HOM05D006419 ORTHO05D008096 1.4e-16 89.7 42 95.2
Potri.014G078200 Populus trichocarpa HOM05D006419 ORTHO05D008096 1.4e-16 89.7 61 72.1
CSS0035991 Camellia sinensis var. sinensis HOM05D006419 ORTHO05D008096 9.4e-16 87.0 57 70.2
CDE11G0029 Ceratophyllum demersum HOM05D006419 ORTHO05D008096 1.6e-15 86.3 61 62.3
Mapoly0004s0131 Marchantia polymorpha HOM05D006419 ORTHO05D008096 2.1e-15 85.9 61 65.6
HPP92_022119 Vanilla planifolia HOM05D006419 ORTHO05D008096 4.7e-15 84.7 65 66.2
ATR0757G048 Amborella trichopoda HOM05D006419 ORTHO05D008096 1.4e-14 83.2 61 65.6
SEGI_03184 Sequoiadendron giganteum HOM05D006419 ORTHO05D008096 1.8e-14 82.8 61 62.3
Pp3c15_11080 Physcomitrium patens HOM05D006419 ORTHO05D008096 3.0e-14 82.0 74 56.8
Cre10.g426000 Chlamydomonas reinhardtii HOM05D006419 ORTHO05D008096 3.9e-14 81.6 61 55.7
SMO367G0935 Selaginella moellendorffii HOM05D006419 ORTHO05D008096 5.3e-11 71.2 61 55.7
FAN19G0283 Fragaria x ananassa HOM05D006419 ORTHO05D008096 7.0e-11 70.9 52 63.5
Carub.0005s2776 Capsella rubella HOM05D006419 ORTHO05D008096 9.1e-11 70.5 37 89.2
AagrBONN_evm.TU.Sc2ySwM_228.3881 Anthoceros agrestis HOM05D006419 ORTHO05D008096 3.5e-10 68.6 62 50.0
Zm00001eb320180 Zea mays HOM05D006419 ORTHO05D008096 2.9e-09 65.5 53 62.3
FAN28G0164 Fragaria x ananassa HOM05D006419 ORTHO05D008096 3.8e-09 65.1 36 77.8
PSO782G2080 Papaver somniferum HOM05D006419 ORTHO05D008096 6.5e-09 64.3 35 80.0
FAN23G1662 Fragaria x ananassa HOM05D006419 ORTHO05D008096 2.5e-08 62.4 35 77.1
PRCOL_00003278 Prasinoderma coloniale HOM05D006419 ORTHO05D008096 1.2e-07 60.1 37 70.3
Dinv28502 Davidia involucrata HOM05D000001 ORTHO05D000003 1.0e-06 57.0 43 55.8


User provided reference genes

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