Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p30230 Brassica napus HOM05D004501 ORTHO05D004944 0.0e+00 1833.9 920 100.0
BraA04t18485Z Brassica rapa HOM05D004501 ORTHO05D004944 0.0e+00 1793.5 941 96.2
C04p67630 Brassica napus HOM05D004501 ORTHO05D004944 0.0e+00 1748.4 926 95.5
BolC4t28262H Brassica oleracea HOM05D004501 ORTHO05D004944 0.0e+00 1738.4 945 93.7
Sp4g22100 Schrenkiella parvula HOM05D004501 ORTHO05D004944 0.0e+00 1555.4 937 84.7
AL4G37360 Arabidopsis lyrata HOM05D004501 ORTHO05D004944 0.0e+00 1516.5 929 83.3
BcaB02g09084 Brassica carinata HOM05D004501 ORTHO05D004944 0.0e+00 1512.3 928 83.2
Thhalv10016197m.g Eutrema salsugineum HOM05D004501 ORTHO05D004944 0.0e+00 1508.8 935 82.1
CARHR134700 Cardamine hirsuta HOM05D004501 ORTHO05D004944 0.0e+00 1508.0 938 82.5
AT2G39810 Arabidopsis thaliana HOM05D004501 ORTHO05D004944 0.0e+00 1487.2 927 82.1
Carub.0004s2192 Capsella rubella HOM05D004501 ORTHO05D004944 0.0e+00 1475.7 932 80.9
BcaB01g03573 Brassica carinata HOM05D004501 ORTHO05D004944 0.0e+00 1359.7 910 77.8
Aa31LG5G19800 Aethionema arabicum HOM05D004501 ORTHO05D004944 0.0e+00 1331.2 942 74.6
BcaC01g05462 Brassica carinata HOM05D004501 ORTHO05D004944 0.0e+00 1320.4 955 73.7
C03p26410 Brassica napus HOM05D004501 ORTHO05D004944 0.0e+00 1224.2 938 71.2
THA.LOC104810067 Tarenaya hassleriana HOM05D004501 ORTHO05D004944 0.0e+00 1184.1 943 66.3
BolC3t15027H Brassica oleracea HOM05D004501 ORTHO05D004944 3.5e-268 928.7 562 84.0
QL12p011237 Quercus lobata HOM05D004501 ORTHO05D004944 1.5e-258 896.7 957 51.9
Cfa012694 Carpinus fangiana HOM05D004501 ORTHO05D004944 3.2e-258 895.6 953 52.8
Atru.chr9.1263 Acer truncatum HOM05D004501 ORTHO05D004944 5.5e-258 894.8 975 51.8
Haze_07939 Corylus avellana HOM05D004501 ORTHO05D004944 2.7e-257 892.5 975 51.8
Potri.001G155200 Populus trichocarpa HOM05D004501 ORTHO05D004944 1.8e-253 879.8 968 51.5
Ciclev10018712m.g Citrus clementina HOM05D004501 ORTHO05D004944 1.0e-251 874.0 969 51.2
Thecc.03G247200 Theobroma cacao HOM05D004501 ORTHO05D004944 2.2e-251 872.8 971 51.6
CiPaw.11G082400 Carya illinoinensis HOM05D004501 ORTHO05D004944 2.9e-251 872.5 935 52.4
Eucgr.E00402 Eucalyptus grandis HOM05D004501 ORTHO05D004944 8.5e-251 870.9 966 51.3
MD04G1060900 Malus domestica HOM05D004501 ORTHO05D004944 3.0e-248 862.4 967 51.2
TWI15G0617 Tripterygium wilfordii HOM05D004501 ORTHO05D004944 5.2e-248 861.7 968 51.3
vmacro14139 Vaccinium macrocarpon HOM05D004501 ORTHO05D004944 8.8e-248 860.9 946 50.2
FAN08G1352 Fragaria x ananassa HOM05D004501 ORTHO05D004944 3.4e-247 859.0 940 50.7
RcHm_v2.0_Chr7g0204151 Rosa chinensis HOM05D004501 ORTHO05D004944 3.4e-247 859.0 951 51.2
COL.COLO4_37109 Corchorus olitorius HOM05D004501 ORTHO05D004944 1.2e-244 850.5 940 52.0
Gorai.008G233400 Gossypium raimondii HOM05D004501 ORTHO05D004944 6.6e-243 844.7 971 50.9
FvH4_5g19540 Fragaria vesca HOM05D004501 ORTHO05D004944 8.6e-243 844.3 969 49.6
FAN13G2915 Fragaria x ananassa HOM05D004501 ORTHO05D004944 1.9e-242 843.2 947 50.3
Potri.003G079700 Populus trichocarpa HOM05D004501 ORTHO05D004944 7.2e-242 841.3 944 51.2
Sabra03G0049600 Salix brachista HOM05D004501 ORTHO05D004944 1.2e-241 840.5 931 50.9
CANSAT21G1630 Cannabis sativa HOM05D004501 ORTHO05D004944 3.6e-241 839.0 953 51.2
Gohir.A12G215200 Gossypium hirsutum HOM05D004501 ORTHO05D004944 1.4e-240 837.0 967 50.1
Manes.01G084200 Manihot esculenta HOM05D004501 ORTHO05D004944 1.4e-240 837.0 936 50.3
Gohir.D12G217800 Gossypium hirsutum HOM05D004501 ORTHO05D004944 2.3e-240 836.3 971 50.4
PGR042G0255 Punica granatum HOM05D004501 ORTHO05D004944 4.4e-239 832.0 961 49.0
Medtr5g012940 Medicago truncatula HOM05D004501 ORTHO05D004944 9.8e-239 830.9 933 49.3
Ca_24594_v3 Cicer arietinum L. HOM05D004501 ORTHO05D004944 4.9e-238 828.6 965 48.4
Lj2C224T11 Lonicera japonica HOM05D004501 ORTHO05D004944 3.2e-237 825.9 903 50.2
Lalb_Chr16g0379471 Lupinus albus HOM05D004501 ORTHO05D004944 7.0e-237 824.7 956 48.5
Sc01g0008260 Simmondsia chinensis HOM05D004501 ORTHO05D004944 1.6e-236 823.5 774 54.8
PGSC0003DMG400026239 Solanum tuberosum HOM05D004501 ORTHO05D004944 5.9e-236 821.6 959 49.0
Sed0022861 Sechium edule HOM05D004501 ORTHO05D004944 1.0e-235 820.8 968 48.8
Cc08_g12070 Coffea canephora HOM05D004501 ORTHO05D004944 1.7e-235 820.1 973 48.3
Glyma.01G207400 Glycine max HOM05D004501 ORTHO05D004944 1.5e-234 817.0 960 47.8
Prupe.5G064600 Prunus persica HOM05D004501 ORTHO05D004944 1.9e-234 816.6 906 51.0
Duzib205G0832 Durio zibethinus HOM05D004501 ORTHO05D004944 4.3e-234 815.5 986 50.6
CAN.G1178.8 Capsicum annuum HOM05D004501 ORTHO05D004944 1.2e-233 813.9 955 49.1
Sabra01G0124800 Salix brachista HOM05D004501 ORTHO05D004944 1.2e-233 813.9 995 48.3
Gohir.D03G165700 Gossypium hirsutum HOM05D004501 ORTHO05D004944 2.1e-233 813.1 968 49.2
Rhsim07G0115200 Rhododendron simsii HOM05D004501 ORTHO05D004944 2.8e-233 812.8 966 48.3
Sopen08g026820 Solanum pennellii HOM05D004501 ORTHO05D004944 2.8e-233 812.8 956 48.4
Nn1g00910 Nelumbo nucifera HOM05D004501 ORTHO05D004944 8.0e-233 811.2 694 59.5
CsaV3_5G004460 Cucumis sativus L. HOM05D004501 ORTHO05D004944 1.4e-232 810.4 972 49.0
Solyc08g078320.3 Solanum lycopersicum HOM05D004501 ORTHO05D004944 1.4e-232 810.4 945 48.7
Lalb_Chr09g0324311 Lupinus albus HOM05D004501 ORTHO05D004944 4.0e-232 808.9 936 48.6
VMungo1215G1578 Vigna mungo HOM05D004501 ORTHO05D004944 8.9e-232 807.7 967 48.3
Gorai.003G175400 Gossypium raimondii HOM05D004501 ORTHO05D004944 4.4e-231 805.4 962 49.1
EL10Ac5g12334 Beta vulgaris HOM05D004501 ORTHO05D004944 5.8e-231 805.1 961 47.8
Gohir.A03G006500 Gossypium hirsutum HOM05D004501 ORTHO05D004944 9.8e-231 804.3 962 49.0
Glyma.11G035800 Glycine max HOM05D004501 ORTHO05D004944 1.7e-230 803.5 953 48.2
Psat2g176440 Pisum sativum HOM05D004501 ORTHO05D004944 1.7e-230 803.5 911 48.8
Dinv21665 Davidia involucrata HOM05D004501 ORTHO05D004944 2.2e-230 803.1 783 54.7
Phvul.002G056400 Phaseolus vulgaris HOM05D004501 ORTHO05D004944 1.9e-229 800.0 969 47.3
MELO3C005513.2 Cucumis melo HOM05D004501 ORTHO05D004944 3.2e-229 799.3 966 49.0
PSO675G3024 Papaver somniferum HOM05D004501 ORTHO05D004944 3.2e-229 799.3 984 47.6
ECA240G3755 Erigeron canadensis HOM05D004501 ORTHO05D004944 5.4e-229 798.5 890 50.6
Duzib068G0690 Durio zibethinus HOM05D004501 ORTHO05D004944 2.7e-228 796.2 964 49.8
Hund14524 Selenicereus undatus HOM05D004501 ORTHO05D004944 2.7e-228 796.2 970 47.0
ClCG01G004260 Citrullus lanatus HOM05D004501 ORTHO05D004944 4.6e-228 795.4 989 47.6
FAN18G4013 Fragaria x ananassa HOM05D004501 ORTHO05D004944 7.8e-228 794.7 1002 47.2
Sed0003847 Sechium edule HOM05D004501 ORTHO05D004944 1.3e-227 793.9 922 49.9
AUR62007118 Chenopodium quinoa HOM05D004501 ORTHO05D004944 1.9e-226 790.0 966 47.9
PSO732G0005 Papaver somniferum HOM05D004501 ORTHO05D004944 7.3e-226 788.1 958 47.7
Lj2g0006235 Lotus japonicus HOM05D004501 ORTHO05D004944 9.5e-226 787.7 919 47.9
Aqoxy7G03746 Aquilegia oxysepala HOM05D004501 ORTHO05D004944 3.6e-225 785.8 955 47.9
HanXRQChr03g0088961 Helianthus annuus HOM05D004501 ORTHO05D004944 3.6e-225 785.8 933 47.7
MSTRG.12127 Avicennia marina HOM05D004501 ORTHO05D004944 6.4e-222 775.0 709 57.7
arahy.Tifrunner.gnm1.ann1.0753T9 Arachis hypogaea HOM05D004501 ORTHO05D004944 8.3e-222 774.6 962 46.0
arahy.Tifrunner.gnm1.ann1.F6SWGC Arachis hypogaea HOM05D004501 ORTHO05D004944 8.3e-222 774.6 962 46.0
HanXRQChr13g0417701 Helianthus annuus HOM05D004501 ORTHO05D004944 1.1e-221 774.2 889 49.0
Oeu027013.1 Olea europaea HOM05D004501 ORTHO05D004944 7.1e-221 771.5 959 47.4
Ah.12g054390 Amaranthus hybridus HOM05D004501 ORTHO05D004944 1.3e-219 767.3 758 52.5
Migut.A01144 Erythranthe guttata HOM05D004501 ORTHO05D004944 5.1e-219 765.4 658 59.0
SalBow6G6502 Salvia bowleyana HOM05D004501 ORTHO05D004944 1.5e-218 763.8 669 57.5
GSVIVG01005813001 Vitis vinifera HOM05D004501 ORTHO05D004944 1.8e-216 756.9 829 51.1
TPR.G18132 Trifolium pratense HOM05D004501 ORTHO05D004944 2.6e-215 753.1 941 46.5
ATR1145G029 Amborella trichopoda HOM05D004501 ORTHO05D004944 5.8e-215 751.9 706 54.2
Lsat_1_v5_gn_6_93441 Lactuca sativa HOM05D004501 ORTHO05D004944 6.4e-214 748.4 906 48.6
Nitab4.5_0010602g0010 Nicotiana tabacum HOM05D004501 ORTHO05D004944 2.7e-212 743.0 941 47.0
AUR62019990 Chenopodium quinoa HOM05D004501 ORTHO05D004944 1.7e-211 740.3 960 46.7
CiPaw.12G049700 Carya illinoinensis HOM05D004501 ORTHO05D004944 8.1e-209 731.5 835 50.1
SGA_v2.0_scaffold104G30193 Striga asiatica HOM05D004501 ORTHO05D004944 4.0e-208 729.2 686 55.2
Actinidia02160 Actinidia chinensis HOM05D004501 ORTHO05D004944 9.3e-205 718.0 933 45.6
Peaxi162Scf00346g00112 Petunia axillaris HOM05D004501 ORTHO05D004944 9.9e-199 698.0 929 44.9
Hma1.2p1_1196F.1_g265990 Hydrangea macrophylla HOM05D004501 ORTHO05D004944 7.3e-194 681.8 798 49.1
CDE11G0214 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 5.8e-191 672.2 790 47.7
Nitab4.5_0001590g0040 Nicotiana tabacum HOM05D004501 ORTHO05D004944 4.9e-190 669.1 946 43.8
SEGI_38311 Sequoiadendron giganteum HOM05D004501 ORTHO05D004944 8.1e-185 651.7 673 50.4
Rhsim13G0032200 Rhododendron simsii HOM05D004501 ORTHO05D004944 1.5e-183 647.5 620 55.5
Zm00001eb056470 Zea mays HOM05D004501 ORTHO05D004944 1.5e-183 647.5 948 41.0
Os03g0737200 Oryza sativa ssp. japonica HOM05D004501 ORTHO05D004944 1.7e-182 644.0 663 49.9
CDE02G3094 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 1.6e-177 627.5 924 42.6
Mapoly0088s0017 Marchantia polymorpha HOM05D004501 ORTHO05D004944 1.1e-162 578.2 710 45.8
CSS0040587 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 2.5e-162 577.0 723 46.6
HPP92_002600 Vanilla planifolia HOM05D004501 ORTHO05D004944 5.9e-159 565.8 725 44.0
Dinv39174 Davidia involucrata HOM05D004501 ORTHO05D004944 1.1e-152 545.0 435 61.8
SMO356G0217 Selaginella moellendorffii HOM05D004501 ORTHO05D004944 3.1e-152 543.5 631 45.8
TAR374G0010 Trochodendron aralioides HOM05D004501 ORTHO05D004944 5.3e-152 542.7 437 62.5
Zm00001eb215300 Zea mays HOM05D004501 ORTHO05D004944 4.2e-149 533.1 849 39.9
Pp3c10_5410 Physcomitrium patens HOM05D004501 ORTHO05D004944 1.1e-146 525.0 677 43.7
Pp3c24_4970 Physcomitrium patens HOM05D004501 ORTHO05D004944 5.7e-146 522.7 677 44.5
DCAR_020178 Daucus carota HOM05D004501 ORTHO05D004944 5.4e-136 489.6 706 42.4
CSS0032615 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 9.4e-133 478.8 684 44.6
C04p07690 Brassica napus HOM05D004501 ORTHO05D004944 2.2e-129 467.6 429 60.6
unitig_0.g1052 Utricularia gibba HOM05D004501 ORTHO05D004944 1.0e-115 422.2 661 38.4
CBR_g20363 Chara braunii HOM05D004501 ORTHO05D004944 7.8e-111 406.0 748 34.6
Actinidia14399 Actinidia chinensis HOM05D004501 ORTHO05D004944 3.9e-110 403.7 730 37.1
BolC4t22385H Brassica oleracea HOM05D004501 ORTHO05D004944 3.9e-110 403.7 251 82.1
AagrBONN_evm.TU.Sc2ySwM_368.3343 Anthoceros agrestis HOM05D004501 ORTHO05D004944 8.3e-105 386.0 475 44.8
BcaC02g12114 Brassica carinata HOM05D004501 ORTHO05D023925 2.4e-104 384.4 326 69.6
Cpa.g.sc776.4 Carica papaya HOM05D004501 ORTHO05D004944 6.4e-97 359.8 286 62.9
MD06G1054200 Malus domestica HOM05D004501 ORTHO05D004944 1.7e-94 351.7 494 46.0
TAR374G0951 Trochodendron aralioides HOM05D004501 ORTHO05D004944 2.1e-79 301.6 541 39.6
MD06G1054400 Malus domestica HOM05D004501 ORTHO05D004944 3.1e-75 287.7 273 56.8
BolC4t22386H Brassica oleracea HOM05D004501 ORTHO05D004944 4.2e-72 277.3 270 58.9
HanXRQChr15g0495741 Helianthus annuus HOM05D004501 ORTHO05D004944 1.7e-65 255.4 243 56.0
CSS0028018 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 2.1e-60 238.4 200 58.5
SHI29866 Sapria himalayana HOM05D004501 ORTHO05D004944 6.3e-60 236.9 234 53.0
DCAR_020177 Daucus carota HOM05D004501 ORTHO05D004944 1.1e-56 226.1 218 56.0
CSS0011270 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 4.5e-50 204.1 175 59.4
CAN.G201.38 Capsicum annuum HOM05D004501 ORTHO05D004944 1.8e-38 165.6 312 37.5
CSS0007149 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 8.8e-38 163.3 133 61.7
FAN04G2417 Fragaria x ananassa HOM05D004501 ORTHO05D004944 8.2e-36 156.8 156 55.1
Cpa.g.sc776.5 Carica papaya HOM05D004501 ORTHO05D004944 1.1e-35 156.4 158 53.2
Zm00001eb142020 Zea mays HOM05D004501 ORTHO05D004944 1.8e-35 155.6 175 44.6
C04p07680 Brassica napus HOM05D004501 ORTHO05D023925 7.0e-35 153.7 118 73.7
PRCOL_00000429 Prasinoderma coloniale HOM05D004501 ORTHO05D004944 3.8e-33 147.9 612 25.8
Zm00001eb047720 Zea mays HOM05D004501 ORTHO05D004944 2.3e-30 138.7 114 55.3
BraA05t19626Z Brassica rapa HOM05D004501 ORTHO05D023925 1.3e-25 122.9 118 65.3
A05p06580 Brassica napus HOM05D004501 ORTHO05D023925 1.7e-25 122.5 118 65.3
CAN.G26.29 Capsicum annuum HOM05D004501 ORTHO05D004944 8.0e-23 113.6 191 38.7
GSVIVG01006616001 Vitis vinifera HOM05D004501 ORTHO05D004944 1.3e-17 96.3 78 55.1
Cpa.g.sc776.3 Carica papaya HOM05D004501 ORTHO05D004944 4.7e-15 87.8 298 33.2
CSS0048159 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 4.5e-10 71.2 42 81.0
Sed0019349 Sechium edule HOM05D004501 ORTHO05D004944 5.9e-10 70.9 93 40.9
BcaB02g09086 Brassica carinata HOM05D004501 ORTHO05D023925 2.9e-09 68.6 52 73.1


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