Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p09560 Brassica napus HOM05D003517 ORTHO05D009798 3.1e-204 714.9 363 100.0
BolSC28t60322H Brassica oleracea HOM05D003517 ORTHO05D009798 3.1e-204 714.9 363 100.0
BraSC48t46302Z Brassica rapa HOM05D003517 ORTHO05D009798 3.1e-204 714.9 363 100.0
AT2G07734 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 4.5e-203 711.1 363 99.2
ATMG00290 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 4.5e-203 711.1 363 99.2
Thhalv10023100m.g Eutrema salsugineum HOM05D003517 ORTHO05D009798 2.9e-202 708.4 363 98.9
BraSC48t46288Z Brassica rapa HOM05D003517 ORTHO05D009798 1.6e-200 702.6 364 98.6
RcHm_v2.0_MTg0499001 Rosa chinensis HOM05D003517 ORTHO05D009798 5.7e-166 587.8 349 87.7
Lalb_Chr00c24g0406771 Lupinus albus HOM05D003517 ORTHO05D009798 3.7e-165 585.1 366 85.5
LjContig00439g0008559 Lotus japonicus HOM05D003517 ORTHO05D009798 2.0e-163 579.3 366 85.0
Lj2P1236T76 Lonicera japonica HOM05D003517 ORTHO05D009798 2.9e-162 575.5 355 85.4
Medtr0082s0030 Medicago truncatula HOM05D003517 ORTHO05D009798 1.5e-161 573.2 353 86.4
Lj5g0015285 Lotus japonicus HOM05D003517 ORTHO05D009798 1.9e-161 572.8 350 86.3
VMungo0985G0017 Vigna mungo HOM05D003517 ORTHO05D009798 3.7e-157 558.5 350 83.7
CAN.G110.13 Capsicum annuum HOM05D003517 ORTHO05D009798 1.1e-156 557.0 352 84.4
Solyc00g021640.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 2.2e-154 549.3 349 84.0
arahy.Tifrunner.gnm1.ann1.PT41Y0 Arachis hypogaea HOM05D003517 ORTHO05D009798 1.4e-148 530.0 344 83.4
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.1e-148 528.9 344 82.3
GSVIVG01006669001 Vitis vinifera HOM05D003517 ORTHO05D009798 3.5e-147 525.4 365 77.3
SGA_v2.0_scaffold420G51390 Striga asiatica HOM05D003517 ORTHO05D009798 7.5e-134 481.1 335 78.5
HanXRQChr16g0504301 Helianthus annuus HOM05D003517 ORTHO05D009798 5.4e-132 474.9 330 77.6
HanXRQMTg0579381 Helianthus annuus HOM05D003517 ORTHO05D009798 5.4e-132 474.9 330 77.6
Nn1g10026 Nelumbo nucifera HOM05D003517 ORTHO05D009798 5.4e-132 474.9 279 86.7
Nn1g10028 Nelumbo nucifera HOM05D003517 ORTHO05D009798 5.4e-132 474.9 279 86.7
Sp3g25550 Schrenkiella parvula HOM05D003517 ORTHO05D009798 1.1e-129 467.2 338 75.4
CsaV3_UNG208660 Cucumis sativus L. HOM05D003517 ORTHO05D009798 1.4e-127 460.3 279 83.9
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.5e-126 456.8 312 78.8
DCAR_032455 Daucus carota HOM05D003517 ORTHO05D009798 2.3e-122 443.0 282 83.0
BolSC28t60424H Brassica oleracea HOM05D003517 ORTHO05D009798 3.4e-118 429.1 216 100.0
Ca_14831_v3 Cicer arietinum L. HOM05D003517 ORTHO05D009798 5.8e-118 428.3 259 86.1
SabraMtG0002700 Salix brachista HOM05D000890 ORTHO05D000697 3.9e-114 415.6 312 74.0
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 3.6e-112 409.1 256 84.0
Zm00001eb436030 Zea mays HOM05D003517 ORTHO05D009798 3.2e-108 396.0 291 72.5
CAN.G85.23 Capsicum annuum HOM05D003517 ORTHO05D009798 1.3e-101 374.0 238 83.2
Lsat_1_v5_gn_7_67721 Lactuca sativa HOM05D003517 ORTHO05D009798 4.3e-97 359.0 257 74.7
Eucgr.C02512 Eucalyptus grandis HOM05D003517 ORTHO05D009798 4.0e-95 352.4 228 82.0
Zm00001eb384400 Zea mays HOM05D003517 ORTHO05D009798 9.0e-95 351.3 256 73.4
Hma1.2p1_0020F.1_g014210 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 1.9e-92 343.6 210 84.8
Hma1.2p1_0020F.1_g014220 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 9.3e-92 341.3 209 84.2
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 9.3e-92 341.3 229 79.9
TPR.G20538 Trifolium pratense HOM05D003517 ORTHO05D009798 3.0e-90 336.3 206 83.5
Gorai.001G161800 Gossypium raimondii HOM05D003517 ORTHO05D009798 5.6e-89 332.0 361 58.4
Eucgr.H02717 Eucalyptus grandis HOM05D003517 ORTHO05D009798 1.0e-82 311.2 226 74.8
CAN.G1109.3 Capsicum annuum HOM05D003517 ORTHO05D009798 3.9e-82 309.3 205 80.0
Lalb_Chr22g0353801 Lupinus albus HOM05D003517 ORTHO05D009798 1.9e-76 290.4 193 78.8
Zm00001eb438100 Zea mays HOM05D003517 ORTHO05D009798 2.3e-74 283.5 214 70.6
Zm00001eb438980 Zea mays HOM05D003517 ORTHO05D009798 2.3e-74 283.5 214 70.6
Zm00001eb439060 Zea mays HOM05D003517 ORTHO05D009798 2.3e-74 283.5 214 70.6
EL10Ac7g18051 Beta vulgaris HOM05D003517 ORTHO05D009798 3.2e-68 263.1 216 66.2
TPR.G36113 Trifolium pratense HOM05D003517 ORTHO05D009798 1.1e-63 248.1 148 88.5
PGSC0003DMG400033608 Solanum tuberosum HOM05D003517 ORTHO05D009798 1.8e-63 247.3 169 76.9
BraSC48t46337Z Brassica rapa HOM05D003517 ORTHO05D009798 3.8e-61 239.6 135 95.6
HanXRQChr10g0310901 Helianthus annuus HOM05D003517 ORTHO05D009798 1.9e-60 237.3 163 76.7
unitig_87.g28026 Utricularia gibba HOM05D003517 ORTHO05D009798 9.4e-60 235.0 200 68.0
SEGI_36410 Sequoiadendron giganteum HOM05D003517 ORTHO05D009798 9.7e-57 224.9 262 51.5
PSO063G7170 Papaver somniferum HOM05D003517 ORTHO05D009798 4.1e-55 219.5 240 52.5
PSO585G0042 Papaver somniferum HOM05D003517 ORTHO05D009798 4.1e-55 219.5 240 52.9
SHI35305 Sapria himalayana HOM05D003517 ORTHO05D009798 3.8e-53 213.0 178 70.8
Nitab4.5_0000172g1110 Nicotiana tabacum HOM05D003517 ORTHO05D009798 9.4e-52 208.4 174 66.7
Nitab4.5_0003945g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.8e-50 204.1 141 78.0
Nitab4.5_0000172g2130 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.0e-49 200.7 137 78.8
Oeu013683.1 Olea europaea HOM05D003517 ORTHO05D009798 2.0e-49 200.7 173 62.4
Zm00001eb438110 Zea mays HOM05D003517 ORTHO05D009798 3.7e-48 196.4 154 71.4
Zm00001eb438970 Zea mays HOM05D003517 ORTHO05D009798 3.7e-48 196.4 154 71.4
Zm00001eb439050 Zea mays HOM05D003517 ORTHO05D009798 3.7e-48 196.4 154 71.4
Zm00001eb440630 Zea mays HOM05D003517 ORTHO05D009798 3.7e-48 196.4 154 71.4
Nitab4.5_0003945g0070 Nicotiana tabacum HOM05D003517 ORTHO05D009798 7.7e-46 188.7 167 66.5
Solyc11g030940.3 Solanum lycopersicum HOM05D003517 ORTHO05D009798 3.8e-45 186.4 150 69.3
SGA_v2.0_scaffold648G53338 Striga asiatica HOM05D003517 ORTHO05D009798 8.5e-45 185.3 134 70.9
Nitab4.5_0001152g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.7e-40 171.0 138 66.7
Nitab4.5_0000172g2160 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.9e-37 160.2 127 66.1
Nitab4.5_0000172g1090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.6e-35 154.5 137 60.6
CARHR287140 Cardamine hirsuta HOM05D003517 ORTHO05D009798 2.1e-35 154.1 80 96.2
TPR.G31549 Trifolium pratense HOM05D003517 ORTHO05D009798 5.2e-34 149.4 91 80.2
Nn1g09918 Nelumbo nucifera HOM05D003517 ORTHO05D009798 1.2e-33 148.3 88 80.7
Gohir.A13G071500 Gossypium hirsutum HOM05D003517 ORTHO05D009798 3.4e-33 146.7 93 83.9
BraSC159t45733Z Brassica rapa HOM05D003517 ORTHO05D009798 2.0e-30 137.5 86 83.7
HanXRQChr10g0302361 Helianthus annuus HOM05D003517 ORTHO05D009798 5.9e-30 136.0 110 61.8
Solyc10g045740.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 1.9e-28 131.0 100 67.0
Nitab4.5_0001152g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009794 4.9e-24 116.3 110 62.7
Nitab4.5_0001152g0480 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.8e-23 114.4 183 43.2
Nitab4.5_0001152g1080 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.4e-23 114.0 91 71.4
Aqoxy4G01626 Aquilegia oxysepala HOM05D003517 ORTHO05D005131 2.3e-21 107.5 122 56.6
Nitab4.5_0001127g0280 Nicotiana tabacum HOM05D003517 ORTHO05D009794 5.6e-20 102.8 62 80.6
Nitab4.5_0008059g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.4e-18 98.2 67 77.6
Dinv18903 Davidia involucrata HOM05D003517 ORTHO05D009798 3.1e-18 97.1 50 96.0
Solyc11g030935.1 Solanum lycopersicum HOM05D003517 ORTHO05D009798 7.5e-17 92.4 100 56.0
Lalb_Chr22g0353791 Lupinus albus HOM05D003517 ORTHO05D009798 1.2e-14 85.1 58 81.0
PSO513G0171 Papaver somniferum HOM05D003517 ORTHO05D009798 4.6e-14 83.2 62 66.1
PSO339G1469 Papaver somniferum HOM05D003517 ORTHO05D009798 1.3e-13 81.6 90 55.6
Nitab4.5_0000351g0300 Nicotiana tabacum HOM05D003517 ORTHO05D009798 8.6e-13 79.0 62 62.9
Nitab4.5_0001152g0970 Nicotiana tabacum HOM05D003517 ORTHO05D025894 4.3e-12 76.6 50 70.0
Medtr0030s0090 Medicago truncatula HOM05D003517 ORTHO05D009798 1.5e-09 68.2 35 88.6
Nitab4.5_0006196g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 4.9e-08 63.2 37 86.5
Lj2g0009144 Lotus japonicus HOM05D000751 ORTHO05D000889 2.4e-07 60.8 37 78.4
Nitab4.5_0010321g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.7e-06 57.4 50 74.0


User provided reference genes

Program Settings