Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p09540 Brassica napus HOM05D007194 ORTHO05D009182 2.2e-137 492.3 248 100.0
BolSC28t60320H Brassica oleracea HOM05D007194 ORTHO05D009182 2.2e-137 492.3 248 100.0
BraSC48t46300Z Brassica rapa HOM05D007194 ORTHO05D009182 2.2e-137 492.3 248 100.0
Sp3g25540 Schrenkiella parvula HOM05D007194 ORTHO05D009182 1.9e-136 489.2 248 99.6
AT2G07771 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 5.7e-133 477.6 243 99.6
ATMG00900 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 5.7e-133 477.6 243 99.6
CARHR283160 Cardamine hirsuta HOM05D007194 ORTHO05D009182 3.7e-132 474.9 243 98.8
Aa31csc239G110 Aethionema arabicum HOM05D007194 ORTHO05D009182 4.2e-128 461.5 243 96.7
AL3G44600 Arabidopsis lyrata HOM05D007194 ORTHO05D009182 4.7e-127 458.0 232 99.6
Cfa021340 Carpinus fangiana HOM05D007194 ORTHO05D009182 4.7e-127 458.0 251 93.6
Gorai.001G165900 Gossypium raimondii HOM05D007194 ORTHO05D009182 3.3e-125 451.8 251 92.8
CANSAT16G0047 Cannabis sativa HOM05D007194 ORTHO05D009182 1.3e-124 449.9 251 92.4
RcHm_v2.0_MTg0498961 Rosa chinensis HOM05D007194 ORTHO05D009182 2.2e-124 449.1 251 92.0
CAN.G1690.2 Capsicum annuum HOM05D007194 ORTHO05D009182 7.0e-123 444.1 251 91.2
DCAR_032453 Daucus carota HOM05D007194 ORTHO05D009182 1.5e-122 443.0 251 92.4
HanXRQChr16g0504451 Helianthus annuus HOM05D007194 ORTHO05D009182 2.0e-122 442.6 248 91.1
HanXRQMTg0579111 Helianthus annuus HOM05D007194 ORTHO05D009182 2.0e-122 442.6 248 91.1
LjContig00315g0023372 Lotus japonicus HOM05D007194 ORTHO05D009182 3.8e-121 438.3 240 93.3
arahy.Tifrunner.gnm1.ann1.14Z8E4 Arachis hypogaea HOM05D007194 ORTHO05D009182 1.9e-120 436.0 240 92.9
arahy.Tifrunner.gnm1.ann1.F9VS0T Arachis hypogaea HOM05D007194 ORTHO05D009182 1.9e-120 436.0 240 92.9
arahy.Tifrunner.gnm1.ann1.SBV1ZL Arachis hypogaea HOM05D007194 ORTHO05D009182 1.9e-120 436.0 240 92.9
Sed0021793 Sechium edule HOM05D007194 ORTHO05D009182 2.1e-119 432.6 232 94.4
Lalb_Chr00c24g0406951 Lupinus albus HOM05D007194 ORTHO05D009182 1.0e-118 430.3 242 90.9
Lsat_1_v5_gn_7_100841 Lactuca sativa HOM05D007194 ORTHO05D009182 2.3e-118 429.1 239 91.2
Lsat_1_v5_gn_7_99901 Lactuca sativa HOM05D007194 ORTHO05D009182 2.3e-118 429.1 239 91.2
Lalb_Chr17g0337381 Lupinus albus HOM05D007194 ORTHO05D009182 1.5e-117 426.4 242 89.7
Solyc00g500242.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 8.2e-116 420.6 243 88.9
Solyc00g500277.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 8.2e-116 420.6 243 88.9
CAN.G85.20 Capsicum annuum HOM05D007194 ORTHO05D009182 1.1e-115 420.2 251 87.6
EL10Ac7g17455 Beta vulgaris HOM05D007194 ORTHO05D009182 5.3e-115 417.9 235 89.8
SGA_v2.0_scaffold400G50840 Striga asiatica HOM05D007194 ORTHO05D009182 2.9e-113 412.1 239 89.1
Aqoxy3G01137 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 5.0e-113 411.4 232 91.8
Psat0s922g0240 Pisum sativum HOM05D007194 ORTHO05D009182 1.1e-112 410.2 228 92.1
SHI36846 Sapria himalayana HOM05D007194 ORTHO05D009182 1.1e-112 410.2 242 87.6
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 2.7e-111 405.6 222 92.3
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 2.7e-111 405.6 222 92.3
BolSC28t60390H Brassica oleracea HOM05D007194 ORTHO05D009182 3.6e-111 405.2 203 100.0
Lj2P1233T109 Lonicera japonica HOM05D007194 ORTHO05D009182 4.7e-111 404.8 219 94.1
Nitab4.5_0000031g0190 Nicotiana tabacum HOM05D007194 ORTHO05D009182 6.1e-111 404.4 232 88.4
Dinv06723 Davidia involucrata HOM05D007194 ORTHO05D009182 5.2e-110 401.4 220 93.2
AT2G07681 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 8.8e-110 400.6 228 91.2
Nn1g09980 Nelumbo nucifera HOM05D007194 ORTHO05D009182 7.0e-107 391.0 216 92.1
arahy.Tifrunner.gnm1.ann1.GM5VKV Arachis hypogaea HOM05D007194 ORTHO05D009182 4.5e-106 388.3 229 88.2
BraSC48t46335Z Brassica rapa HOM05D007194 ORTHO05D009182 2.9e-105 385.6 192 100.0
Lsat_1_v5_gn_1_67041 Lactuca sativa HOM05D007194 ORTHO05D009182 8.8e-102 374.0 210 89.0
SHI36965 Sapria himalayana HOM05D007194 ORTHO05D009182 1.2e-101 373.6 221 86.4
TPR.G39619 Trifolium pratense HOM05D007194 ORTHO05D009182 2.0e-101 372.9 200 93.5
BolSC28t60422H Brassica oleracea HOM05D007194 ORTHO05D009182 1.8e-99 366.3 192 97.4
Lsat_1_v5_gn_6_37840 Lactuca sativa HOM05D007194 ORTHO05D009182 5.5e-96 354.8 206 86.4
Prupe.1G175300 Prunus persica HOM05D007194 ORTHO05D009182 2.3e-94 349.4 209 86.1
Ah.10g028440 Amaranthus hybridus HOM05D007194 ORTHO05D009182 4.0e-94 348.6 198 89.4
Lj5P380T4 Lonicera japonica HOM05D007194 ORTHO05D009182 3.4e-93 345.5 230 79.6
Lsat_1_v5_gn_4_20401 Lactuca sativa HOM05D007194 ORTHO05D009182 9.8e-93 344.0 201 85.6
Eucgr.I01863 Eucalyptus grandis HOM05D007194 ORTHO05D009182 3.1e-91 339.0 251 74.1
Sed0000988 Sechium edule HOM05D007194 ORTHO05D009182 5.6e-88 328.2 170 95.3
TWI15G0311 Tripterygium wilfordii HOM05D007194 ORTHO05D009182 7.3e-88 327.8 173 93.1
Nitab4.5_0001152g0940 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.0e-86 323.9 203 81.8
SalBow1G0339 Salvia bowleyana HOM05D007194 ORTHO05D009182 3.7e-84 315.5 173 93.1
Nitab4.5_0002418g0160 Nicotiana tabacum HOM05D007194 ORTHO05D009182 6.4e-84 314.7 209 78.9
Lj2P1235T102 Lonicera japonica HOM05D007194 ORTHO05D009182 8.3e-84 314.3 175 90.9
Sopen00g002730 Solanum pennellii HOM05D007194 ORTHO05D009182 8.3e-84 314.3 178 87.1
Lsat_1_v5_gn_5_17681 Lactuca sativa HOM05D007194 ORTHO05D009182 9.5e-80 300.8 189 84.7
Nitab4.5_0006806g0100 Nicotiana tabacum HOM05D007194 ORTHO05D009182 9.5e-80 300.8 209 78.0
Nitab4.5_0012158g0050 Nicotiana tabacum HOM05D007194 ORTHO05D009182 4.4e-77 292.0 210 76.2
ECA039G0021 Erigeron canadensis HOM05D007194 ORTHO05D009182 7.0e-75 284.6 156 91.0
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 4.4e-69 265.4 158 83.5
arahy.Tifrunner.gnm1.ann1.UX1VFS Arachis hypogaea HOM05D007194 ORTHO05D009182 1.9e-67 260.0 212 67.5
EL10Ac8g19071 Beta vulgaris HOM05D007194 ORTHO05D009182 2.2e-60 236.5 139 85.6
Nitab4.5_0001646g0030 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.6e-58 230.3 129 89.1
HanXRQChr05g0135281 Helianthus annuus HOM05D007194 ORTHO05D009182 1.7e-57 226.9 129 89.9
QL93p0053_0961 Quercus lobata HOM05D007194 ORTHO05D009182 5.1e-57 225.3 112 96.4
TAR625G1253 Trochodendron aralioides HOM05D007194 ORTHO05D009182 8.1e-55 218.0 124 90.3
arahy.Tifrunner.gnm1.ann1.6A3TYM Arachis hypogaea HOM05D007194 ORTHO05D009182 3.9e-49 199.1 144 73.6
CAN.G1542.2 Capsicum annuum HOM05D007194 ORTHO05D009182 1.3e-47 194.1 118 81.4
Nitab4.5_0003083g0040 Nicotiana tabacum HOM05D007194 ORTHO05D008899 2.8e-47 193.0 108 89.8
BraSC48t46286Z Brassica rapa HOM05D007194 ORTHO05D009182 8.1e-47 191.4 99 100.0
CAN.G889.9 Capsicum annuum HOM05D007194 ORTHO05D009182 2.2e-44 183.3 107 86.9
Lj1P486T6 Lonicera japonica HOM05D007194 ORTHO05D009182 2.9e-44 183.0 108 85.2
ATR0693G113 Amborella trichopoda HOM05D007194 ORTHO05D009182 2.1e-42 176.8 98 88.8
Ca_14744_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 7.9e-42 174.9 88 95.5
Gohir.A08G085962 Gossypium hirsutum HOM05D007194 ORTHO05D009182 1.8e-41 173.7 176 60.2
unitig_87.g27964 Utricularia gibba HOM05D007194 ORTHO05D009182 6.7e-41 171.8 105 85.7
CAN.G1134.4 Capsicum annuum HOM05D007194 ORTHO05D009182 2.0e-37 160.2 110 75.5
ClCG10G007880 Citrullus lanatus HOM05D007194 ORTHO05D009182 1.7e-36 157.1 96 87.5
SHI26663 Sapria himalayana HOM05D007194 ORTHO05D009182 2.2e-36 156.8 101 82.2
Glyma.19G075000 Glycine max HOM05D007194 ORTHO05D009182 2.7e-34 149.8 73 97.3
CAN.G1001.43 Capsicum annuum HOM05D000927 ORTHO05D000850 6.0e-34 148.7 77 90.9
CAN.G122.10 Capsicum annuum HOM05D007194 ORTHO05D009182 2.3e-33 146.7 75 93.3
Gohir.A02G088502 Gossypium hirsutum HOM05D007194 ORTHO05D009182 1.1e-30 137.9 69 92.8
Sopen01g007230 Solanum pennellii HOM05D007194 ORTHO05D009182 1.4e-30 137.5 72 88.9
Haze_27474 Corylus avellana HOM05D007194 ORTHO05D009182 3.1e-30 136.3 185 40.5
CAN.G78.2 Capsicum annuum HOM05D007194 ORTHO05D009182 5.3e-30 135.6 68 94.1
EL10Ac5g12442 Beta vulgaris HOM05D004537 ORTHO05D005492 2.1e-26 123.6 79 78.5
Manes.06G014501 Manihot esculenta HOM05D007194 ORTHO05D009182 3.0e-25 119.8 65 87.7
Peaxi162Scf00174g01622 Petunia axillaris HOM05D000219 ORTHO05D000226 3.9e-25 119.4 60 95.0
Solyc12g035840.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 9.7e-24 114.8 69 82.6
BraSC54t46378Z Brassica rapa HOM05D007194 ORTHO05D009182 3.7e-23 112.8 59 96.6
Nitab4.5_0000859g0090 Nicotiana tabacum HOM05D007194 ORTHO05D009182 5.3e-22 109.0 90 70.0
Nitab4.5_0000859g0080 Nicotiana tabacum HOM05D000540 ORTHO05D008899 3.9e-17 92.8 52 86.5
SHI24634 Sapria himalayana HOM05D007194 ORTHO05D009182 1.1e-16 91.3 132 45.5
CAN.G380.6 Capsicum annuum HOM05D007194 ORTHO05D009182 2.4e-14 83.6 55 76.4
SHI21961 Sapria himalayana HOM05D007194 ORTHO05D009182 2.2e-12 77.0 53 79.2
SHI49604 Sapria himalayana HOM05D007194 ORTHO05D009182 3.9e-09 66.2 37 89.2
Aqoxy4G01620 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 1.1e-08 64.7 35 91.4
Phvul.007G104600 Phaseolus vulgaris HOM05D007194 ORTHO05D009182 1.5e-08 64.3 46 73.9
PGSC0003DMG400042571 Solanum tuberosum HOM05D007194 ORTHO05D009182 3.3e-08 63.2 44 75.0
Dinv00475 Davidia involucrata HOM05D007194 ORTHO05D009182 9.7e-08 61.6 35 85.7


User provided reference genes

Program Settings