Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p09140 Brassica napus HOM05D005229 ORTHO05D006378 1.0e-117 426.8 220 100.0
BcaC02g09463 Brassica carinata HOM05D005229 ORTHO05D006378 3.0e-117 425.2 220 99.5
C04p43050 Brassica napus HOM05D005229 ORTHO05D006378 3.0e-117 425.2 220 99.5
BolC4t25883H Brassica oleracea HOM05D005229 ORTHO05D006378 3.0e-117 425.2 220 99.5
BcaB03g16154 Brassica carinata HOM05D005229 ORTHO05D006378 2.8e-115 418.7 220 96.8
Sp7g09420 Schrenkiella parvula HOM05D005229 ORTHO05D006378 1.5e-113 412.9 220 96.8
Thhalv10026195m.g Eutrema salsugineum HOM05D005229 ORTHO05D006378 6.4e-112 407.5 220 95.5
AL9U11740 Arabidopsis lyrata HOM05D005229 ORTHO05D006378 1.6e-110 402.9 220 93.6
AT4G12800 Arabidopsis thaliana HOM05D005229 ORTHO05D006378 7.8e-110 400.6 220 93.2
Aa31LG9G5690 Aethionema arabicum HOM05D005229 ORTHO05D006378 1.0e-109 400.2 220 93.2
Carub.0007s3001 Capsella rubella HOM05D005229 ORTHO05D006378 1.3e-109 399.8 220 91.8
A08p07360 Brassica napus HOM05D005229 ORTHO05D006378 1.7e-109 399.4 220 93.6
BraA08t32752Z Brassica rapa HOM05D005229 ORTHO05D006378 1.7e-109 399.4 220 93.6
BolC8t47751H Brassica oleracea HOM05D005229 ORTHO05D006378 2.3e-109 399.1 220 93.2
CARHR218150 Cardamine hirsuta HOM05D005229 ORTHO05D006378 3.0e-109 398.7 220 92.3
C08p09050 Brassica napus HOM05D005229 ORTHO05D006378 4.3e-108 394.8 220 92.3
BcaC07g37428 Brassica carinata HOM05D005229 ORTHO05D006378 5.6e-108 394.4 220 91.8
BcaB04g17739 Brassica carinata HOM05D005229 ORTHO05D006378 7.3e-108 394.0 220 93.2
THA.LOC104808816 Tarenaya hassleriana HOM05D005229 ORTHO05D006378 1.6e-107 392.9 220 91.4
Solyc06g082940.3 Solanum lycopersicum HOM05D005229 ORTHO05D006378 5.6e-100 367.9 221 84.6
Peaxi162Scf00841g00210 Petunia axillaris HOM05D005229 ORTHO05D006378 9.6e-100 367.1 220 84.5
Sopen06g034330 Solanum pennellii HOM05D005229 ORTHO05D006378 2.1e-99 365.9 221 84.6
Prupe.6G361000 Prunus persica HOM05D005229 ORTHO05D006378 4.8e-99 364.8 218 83.5
PGSC0003DMG400027671 Solanum tuberosum HOM05D005229 ORTHO05D006378 6.2e-99 364.4 221 84.6
ECA236G3288 Erigeron canadensis HOM05D005229 ORTHO05D006378 8.1e-99 364.0 220 84.1
Oeu013526.1 Olea europaea HOM05D005229 ORTHO05D006378 1.1e-98 363.6 220 84.1
Oeu025298.1 Olea europaea HOM05D005229 ORTHO05D006378 1.4e-98 363.2 220 83.6
Sabra14G0134400 Salix brachista HOM05D005229 ORTHO05D006378 2.4e-98 362.5 220 84.5
Cpa.g.sc8.42 Carica papaya HOM05D005229 ORTHO05D006378 3.1e-98 362.1 220 83.2
AUR62000314 Chenopodium quinoa HOM05D005229 ORTHO05D006378 4.0e-98 361.7 221 82.8
HanXRQChr12g0363961 Helianthus annuus HOM05D005229 ORTHO05D006378 4.0e-98 361.7 220 83.6
Sopen06g034340 Solanum pennellii HOM05D005229 ORTHO05D006378 4.0e-98 361.7 221 83.7
Potri.014G175600 Populus trichocarpa HOM05D005229 ORTHO05D006378 5.3e-98 361.3 220 83.6
Solyc06g082950.4 Solanum lycopersicum HOM05D005229 ORTHO05D006378 5.3e-98 361.3 221 84.2
COL.COLO4_07353 Corchorus olitorius HOM05D005229 ORTHO05D006378 6.9e-98 360.9 221 83.7
SalBow3G3798 Salvia bowleyana HOM05D005229 ORTHO05D006378 6.9e-98 360.9 221 83.3
PGSC0003DMG400027672 Solanum tuberosum HOM05D005229 ORTHO05D006378 6.9e-98 360.9 221 83.7
CAN.G874.38 Capsicum annuum HOM05D005229 ORTHO05D006378 9.0e-98 360.5 221 83.7
SGA_v2.0_scaffold29G12061 Striga asiatica HOM05D005229 ORTHO05D006378 1.2e-97 360.1 220 82.7
DCAR_018610 Daucus carota HOM05D005229 ORTHO05D006378 1.5e-97 359.8 220 82.7
Gohir.D07G168100 Gossypium hirsutum HOM05D005229 ORTHO05D006378 2.6e-97 359.0 221 83.7
CAN.G874.39 Capsicum annuum HOM05D005229 ORTHO05D006378 3.4e-97 358.6 221 83.3
AUR62006659 Chenopodium quinoa HOM05D005229 ORTHO05D006378 3.4e-97 358.6 221 81.4
Aqoxy2G04070 Aquilegia oxysepala HOM05D005229 ORTHO05D006378 4.4e-97 358.2 220 84.1
Eucgr.K02362 Eucalyptus grandis HOM05D005229 ORTHO05D006378 4.4e-97 358.2 230 80.9
Gohir.A07G160500 Gossypium hirsutum HOM05D005229 ORTHO05D006378 4.4e-97 358.2 221 83.7
Migut.D00776 Erythranthe guttata HOM05D005229 ORTHO05D006378 7.6e-97 357.5 217 85.3
Atru.chr6.3527 Acer truncatum HOM05D005229 ORTHO05D006378 1.3e-96 356.7 220 81.8
Manes.12G055600 Manihot esculenta HOM05D005229 ORTHO05D006378 2.2e-96 355.9 216 82.4
QL01p048658 Quercus lobata HOM05D005229 ORTHO05D006378 2.2e-96 355.9 217 82.0
unitig_0.g420 Utricularia gibba HOM05D005229 ORTHO05D006378 2.2e-96 355.9 220 80.9
MSTRG.12743 Avicennia marina HOM05D005229 ORTHO05D006378 4.9e-96 354.8 220 81.4
PGR083G1330 Punica granatum HOM05D005229 ORTHO05D006378 4.9e-96 354.8 221 81.0
TAR365G0963 Trochodendron aralioides HOM05D005229 ORTHO05D006378 4.9e-96 354.8 218 81.2
MSTRG.17960 Avicennia marina HOM05D005229 ORTHO05D006378 8.4e-96 354.0 220 81.4
Gohir.A07G089500 Gossypium hirsutum HOM05D005229 ORTHO05D006378 8.4e-96 354.0 219 82.6
Lsat_1_v5_gn_8_98481 Lactuca sativa HOM05D005229 ORTHO05D006378 8.4e-96 354.0 220 80.5
unitig_60.g25573 Utricularia gibba HOM05D005229 ORTHO05D006378 8.4e-96 354.0 220 80.9
Nn1g09761 Nelumbo nucifera HOM05D005229 ORTHO05D006378 1.1e-95 353.6 218 82.1
Gorai.N002100 Gossypium raimondii HOM05D005229 ORTHO05D006378 1.4e-95 353.2 221 83.7
Thecc.01G207800 Theobroma cacao HOM05D005229 ORTHO05D006378 1.4e-95 353.2 220 81.4
FvH4_6g00530 Fragaria vesca HOM05D005229 ORTHO05D006378 2.4e-95 352.4 218 82.1
FAN02G4095 Fragaria x ananassa HOM05D005229 ORTHO05D006378 2.4e-95 352.4 218 82.1
FAN05G0704 Fragaria x ananassa HOM05D005229 ORTHO05D006378 2.4e-95 352.4 218 82.1
FAN09G4314 Fragaria x ananassa HOM05D005229 ORTHO05D006378 2.4e-95 352.4 218 82.1
RcHm_v2.0_Chr3g0447921 Rosa chinensis HOM05D005229 ORTHO05D006378 2.4e-95 352.4 218 82.6
DCAR_012704 Daucus carota HOM05D005229 ORTHO05D006378 3.2e-95 352.1 219 80.8
Lj1g0022024 Lotus japonicus HOM05D005229 ORTHO05D006378 3.2e-95 352.1 219 82.2
Potri.002G239700 Populus trichocarpa HOM05D005229 ORTHO05D006378 3.2e-95 352.1 220 80.5
Rhsim01G0247800 Rhododendron simsii HOM05D005229 ORTHO05D006378 3.2e-95 352.1 222 82.0
Gohir.D07G094300 Gossypium hirsutum HOM05D005229 ORTHO05D006378 7.1e-95 350.9 221 81.0
FAN14G1738 Fragaria x ananassa HOM05D005229 ORTHO05D006378 9.3e-95 350.5 218 81.7
MD12G1260300 Malus domestica HOM05D005229 ORTHO05D006378 9.3e-95 350.5 219 80.4
Gorai.001G101200 Gossypium raimondii HOM05D005229 ORTHO05D006378 1.2e-94 350.1 221 80.5
MD04G1244400 Malus domestica HOM05D005229 ORTHO05D006378 1.2e-94 350.1 219 80.4
EL10Ac4g09972 Beta vulgaris HOM05D005229 ORTHO05D006378 1.6e-94 349.7 221 79.2
Cfa006268 Carpinus fangiana HOM05D005229 ORTHO05D006378 1.6e-94 349.7 218 81.2
TWI18G1321 Tripterygium wilfordii HOM05D005229 ORTHO05D006378 1.6e-94 349.7 218 79.4
Sabra02G0182500 Salix brachista HOM05D005229 ORTHO05D006378 2.1e-94 349.4 220 81.4
vmacro14690 Vaccinium macrocarpon HOM05D005229 ORTHO05D006378 2.7e-94 349.0 221 81.9
Ciclev10016637m.g Citrus clementina HOM05D005229 ORTHO05D006378 3.5e-94 348.6 220 80.0
CiPaw.07G079800 Carya illinoinensis HOM05D005229 ORTHO05D006378 4.6e-94 348.2 219 80.8
Haze_04550 Corylus avellana HOM05D005229 ORTHO05D006378 4.6e-94 348.2 218 80.7
Lsat_1_v5_gn_9_16861 Lactuca sativa HOM05D005229 ORTHO05D006378 4.6e-94 348.2 214 81.3
PSO017G0175 Papaver somniferum HOM05D005229 ORTHO05D006378 4.6e-94 348.2 220 81.8
PSO675G2116 Papaver somniferum HOM05D005229 ORTHO05D006378 4.6e-94 348.2 220 81.8
CANSAT54G2118 Cannabis sativa HOM05D005229 ORTHO05D006378 7.9e-94 347.4 219 79.9
TWI36G1337 Tripterygium wilfordii HOM05D005229 ORTHO05D006378 7.9e-94 347.4 220 79.1
CDE06G2797 Ceratophyllum demersum HOM05D005229 ORTHO05D006378 1.0e-93 347.1 219 79.5
VMungo1383G0609 Vigna mungo HOM05D005229 ORTHO05D006378 1.0e-93 347.1 221 79.6
Psat3g138440 Pisum sativum HOM05D005229 ORTHO05D006378 1.3e-93 346.7 219 80.8
HanXRQChr08g0231801 Helianthus annuus HOM05D005229 ORTHO05D006378 1.7e-93 346.3 214 80.4
MBI07_g06134_MAGBIO Magnolia biondii HOM05D005229 ORTHO05D006378 1.7e-93 346.3 218 79.4
Ca_07979_v3 Cicer arietinum L. HOM05D005229 ORTHO05D006378 2.3e-93 345.9 219 79.9
Glyma.18G241700 Glycine max HOM05D005229 ORTHO05D006378 3.0e-93 345.5 219 80.4
Lalb_Chr19g0127611 Lupinus albus HOM05D005229 ORTHO05D006378 5.1e-93 344.7 219 79.9
arahy.Tifrunner.gnm1.ann1.MF538D Arachis hypogaea HOM05D005229 ORTHO05D006378 6.6e-93 344.4 219 79.5
ECA247G0242 Erigeron canadensis HOM05D005229 ORTHO05D006378 6.6e-93 344.4 215 81.4
Medtr7g079900 Medicago truncatula HOM05D005229 ORTHO05D006378 6.6e-93 344.4 219 79.0
Hund07343 Selenicereus undatus HOM05D005229 ORTHO05D006378 1.1e-92 343.6 222 77.5
arahy.Tifrunner.gnm1.ann1.18YQBF Arachis hypogaea HOM05D005229 ORTHO05D006378 2.5e-92 342.4 219 79.0
Phvul.008G054400 Phaseolus vulgaris HOM05D005229 ORTHO05D006378 2.5e-92 342.4 219 78.5
TPR.G30351 Trifolium pratense HOM05D005229 ORTHO05D006378 2.5e-92 342.4 220 80.5
CsaV3_2G009680 Cucumis sativus L. HOM05D005229 ORTHO05D006378 3.3e-92 342.0 220 79.1
Glyma.09G250800 Glycine max HOM05D005229 ORTHO05D006378 4.3e-92 341.7 219 79.5
ClCG11G010740 Citrullus lanatus HOM05D005229 ORTHO05D006378 7.4e-92 340.9 220 78.6
MELO3C008731.2 Cucumis melo HOM05D005229 ORTHO05D006378 7.4e-92 340.9 220 78.6
Lj2P1112T20 Lonicera japonica HOM05D005229 ORTHO05D006378 7.4e-92 340.9 216 81.5
Thecc.05G199500 Theobroma cacao HOM05D005229 ORTHO05D006378 9.6e-92 340.5 218 79.4
Actinidia34531 Actinidia chinensis HOM05D005229 ORTHO05D006378 1.3e-91 340.1 222 80.2
Lalb_Chr01g0020361 Lupinus albus HOM05D005229 ORTHO05D006378 2.1e-91 339.3 219 78.5
Cc01_g15890 Coffea canephora HOM05D005229 ORTHO05D006378 3.6e-91 338.6 218 76.6
Duzib138G0242 Durio zibethinus HOM05D005229 ORTHO05D006378 8.1e-91 337.4 221 77.8
GSVIVG01019114001 Vitis vinifera HOM05D005229 ORTHO05D006378 8.1e-91 337.4 221 76.9
PGR044G1943 Punica granatum HOM05D005229 ORTHO05D006378 1.8e-90 336.3 220 77.7
Sed0003052 Sechium edule HOM05D005229 ORTHO05D006378 1.8e-90 336.3 220 78.2
Sed0023204 Sechium edule HOM05D005229 ORTHO05D006378 1.8e-90 336.3 220 77.7
Ah.04g158950 Amaranthus hybridus HOM05D005229 ORTHO05D006378 5.3e-90 334.7 220 75.9
CSS0044510 Camellia sinensis var. sinensis HOM05D005229 ORTHO05D006378 1.2e-89 333.6 226 77.0
SEGI_02964 Sequoiadendron giganteum HOM05D005229 ORTHO05D006378 1.2e-81 307.0 175 82.9
Os12g0420400 Oryza sativa ssp. japonica HOM05D005229 ORTHO05D006378 2.0e-81 306.2 221 71.9
Lj1P104T52 Lonicera japonica HOM05D005229 ORTHO05D006378 2.6e-81 305.8 165 89.7
ATR1147G045 Amborella trichopoda HOM05D005229 ORTHO05D006378 1.7e-80 303.1 226 69.9
CDE06G0966 Ceratophyllum demersum HOM05D005229 ORTHO05D006378 4.6e-78 295.0 194 76.8
Zm00001eb123000 Zea mays HOM05D005229 ORTHO05D006378 1.8e-77 293.1 221 70.6
Nitab4.5_0001348g0130 Nicotiana tabacum HOM05D005229 ORTHO05D006378 1.1e-74 283.9 165 85.5
Pp3c5_4200 Physcomitrium patens HOM05D005229 ORTHO05D006378 6.9e-74 281.2 178 78.7
Mapoly0102s0025 Marchantia polymorpha HOM05D005229 ORTHO05D006378 1.5e-73 280.0 177 76.3
Zm00001eb336580 Zea mays HOM05D005229 ORTHO05D006378 7.6e-73 277.7 163 81.6
Pp3c16_5670 Physcomitrium patens HOM05D005229 ORTHO05D006378 1.7e-72 276.6 172 78.5
Pp3c27_2310 Physcomitrium patens HOM05D005229 ORTHO05D006378 2.5e-71 272.7 169 78.7
AagrBONN_evm.TU.Sc2ySwM_362.2854 Anthoceros agrestis HOM05D005229 ORTHO05D006378 6.1e-70 268.1 221 67.0
Dinv28794 Davidia involucrata HOM05D005229 ORTHO05D006378 1.4e-63 246.9 220 63.2
CBR_g27900 Chara braunii HOM05D005229 ORTHO05D006378 3.7e-59 232.3 222 57.7
Nitab4.5_0001348g0080 Nicotiana tabacum HOM05D005229 ORTHO05D006378 3.1e-58 229.2 219 59.8
Peaxi162Scf01242g00025 Petunia axillaris HOM05D005229 ORTHO05D006378 6.5e-56 221.5 220 58.6
MCO13G042 Micromonas commoda HOM05D005229 ORTHO05D006378 4.5e-49 198.7 211 52.1
Cre12.g486300 Chlamydomonas reinhardtii HOM05D005229 ORTHO05D006378 2.5e-47 193.0 211 52.6
Hma1.2p1_0171F.1_g075540 Hydrangea macrophylla HOM05D005229 ORTHO05D006378 3.0e-45 186.0 127 74.0
PRCOL_00002830 Prasinoderma coloniale HOM05D005229 ORTHO05D006378 1.8e-42 176.8 150 57.3
Actinidia23801 Actinidia chinensis HOM05D005229 ORTHO05D006378 7.7e-41 171.4 140 70.0
MD04G1204600 Malus domestica HOM05D000208 ORTHO05D000130 4.0e-29 132.5 105 70.5
Actinidia04690 Actinidia chinensis HOM05D004953 ORTHO05D006193 3.3e-15 86.3 59 71.2
Actinidia12853 Actinidia chinensis HOM05D001772 ORTHO05D000476 3.3e-15 86.3 59 71.2
Aa31LG9G5680 Aethionema arabicum HOM05D001772 ORTHO05D000476 4.9e-11 72.4 56 75.0
Actinidia23346 Actinidia chinensis HOM05D005229 ORTHO05D057974 2.1e-06 57.0 102 41.2
Nitab4.5_0014403g0020 Nicotiana tabacum HOM05D005229 ORTHO05D006378 8.1e-06 55.1 57 56.1


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