Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p08060 Brassica napus HOM05D001038 ORTHO05D000395 2.4e-34 148.3 76 100.0
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 8.6e-32 139.8 76 94.7
BolC7t40990H Brassica oleracea HOM05D001957 ORTHO05D002015 4.7e-30 134.0 76 86.8
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 2.3e-29 131.7 76 86.8
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 1.5e-28 129.0 76 85.5
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 2.9e-27 124.8 76 84.2
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 2.5e-23 111.7 76 73.7
C03p47220 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-22 109.0 59 93.2
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 3.6e-22 107.8 76 68.4
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 3.6e-22 107.8 76 68.4
BraA09t36747Z Brassica rapa HOM05D001038 ORTHO05D000395 2.3e-21 105.1 76 68.4
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 3.1e-21 104.8 76 69.7
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 3.1e-21 104.8 76 67.1
BcaB08g36368 Brassica carinata HOM05D001038 ORTHO05D000395 6.8e-21 103.6 76 67.1
A02p12570 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-20 102.8 76 67.1
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-20 102.1 76 63.2
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-20 102.1 76 63.2
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 3.4e-20 101.3 76 65.8
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 3.4e-20 101.3 76 64.5
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 3.4e-20 101.3 76 65.8
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 4.4e-20 100.9 76 67.1
BraA06t25652Z Brassica rapa HOM05D001038 ORTHO05D000395 9.9e-20 99.8 72 68.1
BraA07t28816Z Brassica rapa HOM05D001038 ORTHO05D000395 9.9e-20 99.8 76 63.2
BcaC06g34271 Brassica carinata HOM05D001038 ORTHO05D000395 6.4e-19 97.1 76 64.5
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 8.3e-19 96.7 76 65.8
BraA06t25335Z Brassica rapa HOM05D001038 ORTHO05D000395 1.1e-18 96.3 72 66.7
BolC5t30492H Brassica oleracea HOM05D001038 ORTHO05D000395 1.4e-18 95.9 72 68.1
BraA05t21246Z Brassica rapa HOM05D001038 ORTHO05D000395 7.1e-18 93.6 72 62.5
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 6.0e-17 90.5 76 61.8
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-16 89.4 76 57.9
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-16 88.2 76 59.2
BraA06t25413Z Brassica rapa HOM05D001038 ORTHO05D000395 5.1e-16 87.4 56 75.0
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 6.6e-16 87.0 57 71.9
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 6.6e-16 87.0 57 71.9
BolC4t26208H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-15 86.3 76 59.2
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-15 85.9 76 55.3
BraA08t34502Z Brassica rapa HOM05D001038 ORTHO05D000395 1.9e-15 85.5 68 63.2
BcaC04g23074 Brassica carinata HOM05D001038 ORTHO05D019962 3.3e-15 84.7 76 56.6
BcaB01g01124 Brassica carinata HOM05D001038 ORTHO05D000395 5.6e-15 84.0 76 56.6
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 5.6e-15 84.0 76 56.6
A03p30780 Brassica napus HOM05D001038 ORTHO05D000395 5.6e-15 84.0 75 58.7
BcaB01g00119 Brassica carinata HOM05D001038 ORTHO05D000395 9.5e-15 83.2 76 56.6
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 9.5e-15 83.2 72 55.6
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 9.5e-15 83.2 76 52.6
C09p39690 Brassica napus HOM05D001038 ORTHO05D000395 9.5e-15 83.2 72 55.6
BolC9t56849H Brassica oleracea HOM05D001038 ORTHO05D000395 9.5e-15 83.2 72 55.6
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-14 82.8 69 58.0
BcaB07g31487 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-14 82.8 63 65.1
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 1.6e-14 82.4 63 65.1
BraA03t12256Z Brassica rapa HOM05D001038 ORTHO05D000395 1.6e-14 82.4 75 57.3
BcaB04g19295 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-14 82.0 76 57.9
BcaB08g35415 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-14 82.0 72 56.9
C03p74230 Brassica napus HOM05D001038 ORTHO05D000395 2.1e-14 82.0 76 51.3
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-14 81.6 56 67.9
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 3.6e-14 81.3 76 53.9
BolC3t19681H Brassica oleracea HOM05D001038 ORTHO05D000395 6.2e-14 80.5 76 50.0
C02p45440 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-13 79.7 56 64.3
BcaC01g02304 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-13 79.3 56 67.9
C03p66800 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-13 79.3 56 67.9
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-13 78.6 56 62.5
BraA04t16796Z Brassica rapa HOM05D001038 ORTHO05D000395 3.1e-13 78.2 76 53.9
C01p43390 Brassica napus HOM05D001038 ORTHO05D024222 5.2e-13 77.4 52 69.2
C09p50150 Brassica napus HOM05D001038 ORTHO05D000395 5.2e-13 77.4 56 64.3
BraA05t20013Z Brassica rapa HOM05D001038 ORTHO05D000395 5.2e-13 77.4 76 51.3
BcaB02g07256 Brassica carinata HOM05D001038 ORTHO05D024222 8.9e-13 76.6 74 52.7
BcaB05g23513 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-12 76.3 57 61.4
BcaC04g19884 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-12 76.3 56 64.3
C09p45390 Brassica napus HOM05D001038 ORTHO05D024072 1.5e-12 75.9 75 54.7
BcaC03g15415 Brassica carinata HOM05D001038 ORTHO05D000395 2.6e-12 75.1 76 50.0
C07p12210 Brassica napus HOM05D001038 ORTHO05D040877 2.6e-12 75.1 79 50.6
BcaC01g03478 Brassica carinata HOM05D001038 ORTHO05D000395 3.4e-12 74.7 62 56.5
BcaC05g27733 Brassica carinata HOM05D001038 ORTHO05D000395 3.4e-12 74.7 53 66.0
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 3.4e-12 74.7 57 61.4
C03p52030 Brassica napus HOM05D001038 ORTHO05D000395 3.4e-12 74.7 62 56.5
C05p37210 Brassica napus HOM05D001038 ORTHO05D000395 3.4e-12 74.7 53 66.0
BolC3t17485H Brassica oleracea HOM05D001038 ORTHO05D000395 3.4e-12 74.7 62 56.5
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 3.4e-12 74.7 57 61.4
C07p18280 Brassica napus HOM05D001038 ORTHO05D000395 5.8e-12 73.9 79 48.1
BolC7t42338H Brassica oleracea HOM05D001038 ORTHO05D000395 1.7e-11 72.4 79 46.8
BcaC08g43120 Brassica carinata HOM05D001038 ORTHO05D032078 2.2e-11 72.0 56 62.5
BraA06t25409Z Brassica rapa HOM05D001038 ORTHO05D000395 2.2e-11 72.0 79 48.1
BraA03t13820Z Brassica rapa HOM05D001038 ORTHO05D000395 3.8e-11 71.2 66 53.0
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 4.9e-11 70.9 79 46.8
BraSC36t46105Z Brassica rapa HOM05D001038 ORTHO05D000395 6.4e-11 70.5 62 53.2
BolC2t11144H Brassica oleracea HOM05D001038 ORTHO05D040877 1.1e-10 69.7 79 46.8
BcaB01g01350 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-10 69.3 55 60.0
BolC7t41409H Brassica oleracea HOM05D001038 ORTHO05D000395 1.4e-10 69.3 79 48.1
BraA05t20300Z Brassica rapa HOM05D001038 ORTHO05D000395 1.4e-10 69.3 52 65.4
BNapus_Darmor_BZH_scaffold_104p00080 Brassica napus HOM05D001038 ORTHO05D000395 1.9e-10 68.9 62 53.2
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 3.2e-10 68.2 67 47.8
BcaC09g50083 Brassica carinata HOM05D001038 ORTHO05D000395 4.1e-10 67.8 53 60.4
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 4.1e-10 67.8 67 47.8
A06p16020 Brassica napus HOM05D001038 ORTHO05D024222 5.4e-10 67.4 46 69.6
A06p36110 Brassica napus HOM05D001038 ORTHO05D024222 5.4e-10 67.4 46 69.6
BcaB07g32736 Brassica carinata HOM05D001038 ORTHO05D024484 9.2e-10 66.6 63 50.8
C04p46240 Brassica napus HOM05D001038 ORTHO05D000395 9.2e-10 66.6 45 73.3
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 1.2e-09 66.2 67 47.8
A06p26760 Brassica napus HOM05D001038 ORTHO05D000395 2.1e-09 65.5 62 46.8
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 2.1e-09 65.5 52 61.5
C05p36690 Brassica napus HOM05D001038 ORTHO05D000395 2.7e-09 65.1 67 47.8
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 3.5e-09 64.7 62 45.2
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 3.5e-09 64.7 62 45.2
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 6.0e-09 63.9 62 45.2
BraA02t08904Z Brassica rapa HOM05D001038 ORTHO05D000395 6.0e-09 63.9 72 47.2
BraA04t18197Z Brassica rapa HOM05D001038 ORTHO05D000395 6.0e-09 63.9 63 50.8
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 6.0e-09 63.9 62 45.2
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 1.0e-08 63.2 65 50.8
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 1.0e-08 63.2 56 55.4
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 1.0e-08 63.2 56 55.4
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 1.0e-08 63.2 65 50.8
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-08 62.0 60 51.7
BolC7t43509H Brassica oleracea HOM05D001038 ORTHO05D000395 2.3e-08 62.0 56 53.6
BolC6t36762H Brassica oleracea HOM05D001038 ORTHO05D000395 3.0e-08 61.6 61 49.2
BolC7t41881H Brassica oleracea HOM05D001038 ORTHO05D000395 3.9e-08 61.2 56 53.6
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 3.9e-08 61.2 55 45.5
BraA06t24005Z Brassica rapa HOM05D001038 ORTHO05D000395 6.6e-08 60.5 52 50.0
A07p30050 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-07 59.7 60 46.7
C09p37880 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-07 59.7 55 47.3
BolC4t27362H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-07 59.7 70 45.7
BolC8t47295H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-07 59.7 52 57.7
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-07 59.7 55 47.3
C04p37080 Brassica napus HOM05D034669 ORTHO05D000395 1.5e-07 59.3 46 63.0
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-07 59.3 55 47.3
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 1.5e-07 59.3 55 47.3
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 4.3e-07 57.8 59 52.5
BcaC06g32026 Brassica carinata HOM05D001038 ORTHO05D000395 4.3e-07 57.8 62 53.2
C08p27920 Brassica napus HOM05D001038 ORTHO05D018639 4.3e-07 57.8 66 48.5
BolC2t07185H Brassica oleracea HOM05D001038 ORTHO05D000395 4.3e-07 57.8 52 53.8
BolC3t16999H Brassica oleracea HOM05D001038 ORTHO05D018639 4.3e-07 57.8 66 48.5
C06p00860 Brassica napus HOM05D001038 ORTHO05D000395 5.6e-07 57.4 56 50.0
BolC3t16968H Brassica oleracea HOM05D001038 ORTHO05D000395 5.6e-07 57.4 56 50.0
BolC7t41662H Brassica oleracea HOM05D001038 ORTHO05D031981 5.6e-07 57.4 56 50.0
A06p28660 Brassica napus HOM05D001038 ORTHO05D000395 7.3e-07 57.0 55 49.1
BraA06t25806Z Brassica rapa HOM05D001038 ORTHO05D000395 7.3e-07 57.0 55 49.1
A09p58370 Brassica napus HOM05D001038 ORTHO05D000395 9.6e-07 56.6 56 50.0
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 9.6e-07 56.6 59 52.5
BcaC09g51594 Brassica carinata HOM05D001038 ORTHO05D021830 1.2e-06 56.2 56 51.8
C01p11670 Brassica napus HOM05D001038 ORTHO05D021830 1.2e-06 56.2 56 51.8
BolC1t01131H Brassica oleracea HOM05D001038 ORTHO05D021830 1.2e-06 56.2 56 51.8
BolC8t49550H Brassica oleracea HOM05D001038 ORTHO05D000395 1.2e-06 56.2 52 53.8
BraA01t02128Z Brassica rapa HOM05D001038 ORTHO05D000395 1.2e-06 56.2 49 59.2
BraA02t08028Z Brassica rapa HOM05D001038 ORTHO05D024222 1.2e-06 56.2 43 60.5
BolC3t20321H Brassica oleracea HOM05D001038 ORTHO05D000395 1.6e-06 55.8 56 48.2
BolC7t41648H Brassica oleracea HOM05D001038 ORTHO05D000395 1.6e-06 55.8 70 45.7
BcaC06g35714 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-06 55.5 70 45.7
C07p11750 Brassica napus HOM05D001038 ORTHO05D000395 2.1e-06 55.5 70 45.7
A04p08290 Brassica napus HOM05D001038 ORTHO05D024484 2.8e-06 55.1 50 54.0
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 2.8e-06 55.1 60 50.0
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 3.6e-06 54.7 55 45.5
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 3.6e-06 54.7 55 45.5
BolC7t44009H Brassica oleracea HOM05D001038 ORTHO05D024484 4.7e-06 54.3 50 52.0
BraA04t16612Z Brassica rapa HOM05D001038 ORTHO05D018639 4.7e-06 54.3 60 51.7
BcaB06g28671 Brassica carinata HOM05D001038 ORTHO05D018639 6.2e-06 53.9 66 48.5
BraA04t18267Z Brassica rapa HOM05D001038 ORTHO05D021830 6.2e-06 53.9 48 56.2
BraA08t32580Z Brassica rapa HOM05D001038 ORTHO05D000395 6.2e-06 53.9 56 46.4
BcaC01g04980 Brassica carinata HOM05D001038 ORTHO05D000395 8.1e-06 53.5 56 46.4
BolC5t34489H Brassica oleracea HOM05D001038 ORTHO05D000395 8.1e-06 53.5 56 44.6


User provided reference genes

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