Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p05670 Brassica napus HOM05D005750 ORTHO05D007126 1.8e-154 549.3 283 100.0
BraA04t16263Z Brassica rapa HOM05D005750 ORTHO05D007126 1.7e-149 532.7 281 97.5
C04p38380 Brassica napus HOM05D005750 ORTHO05D007126 6.9e-143 510.8 288 91.0
BcaC02g09095 Brassica carinata HOM05D005750 ORTHO05D007126 9.0e-143 510.4 288 90.6
BolC4t25415H Brassica oleracea HOM05D005750 ORTHO05D007126 3.4e-142 508.4 286 90.9
BcaB02g08472 Brassica carinata HOM05D005750 ORTHO05D007126 2.2e-141 505.8 289 89.3
Sp5g08260 Schrenkiella parvula HOM05D005750 ORTHO05D007126 4.3e-137 491.5 288 88.2
Thhalv10010608m.g Eutrema salsugineum HOM05D005750 ORTHO05D007126 3.7e-136 488.4 288 87.8
Carub.0005s2072 Capsella rubella HOM05D005750 ORTHO05D007126 6.3e-136 487.6 288 86.5
AL5G35150 Arabidopsis lyrata HOM05D005750 ORTHO05D007126 1.2e-134 483.4 288 86.5
CARHR164010 Cardamine hirsuta HOM05D005750 ORTHO05D007126 2.0e-134 482.6 288 85.4
A09p47130 Brassica napus HOM05D005750 ORTHO05D007126 4.5e-134 481.5 288 85.4
BraA09t40175Z Brassica rapa HOM05D005750 ORTHO05D007126 4.5e-134 481.5 288 85.4
C08p29390 Brassica napus HOM05D005750 ORTHO05D007126 7.6e-134 480.7 288 85.4
BolC8t50540H Brassica oleracea HOM05D005750 ORTHO05D007126 7.6e-134 480.7 288 85.4
AT3G54130 Arabidopsis thaliana HOM05D005750 ORTHO05D007126 2.1e-131 472.6 288 85.4
Aa31sc171G20 Aethionema arabicum HOM05D005750 ORTHO05D007126 6.9e-127 457.6 287 82.9
THA.LOC104823389 Tarenaya hassleriana HOM05D005750 ORTHO05D007126 3.9e-122 441.8 290 77.9
Duzib128G1738 Durio zibethinus HOM05D005750 ORTHO05D007126 8.5e-109 397.5 286 71.3
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 5.5e-108 394.8 268 74.3
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 5.5e-108 394.8 268 74.3
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 1.6e-107 393.3 287 70.4
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 2.7e-107 392.5 268 73.9
CANSAT35G0049 Cannabis sativa HOM05D005750 ORTHO05D007126 3.6e-107 392.1 285 70.5
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 4.7e-107 391.7 283 70.7
Ciclev10012396m.g Citrus clementina HOM05D005750 ORTHO05D007126 2.3e-106 389.4 285 70.2
Prupe.6G269800 Prunus persica HOM05D005750 ORTHO05D007126 6.7e-106 387.9 264 75.8
BcaB01g00216 Brassica carinata HOM05D005750 ORTHO05D007126 4.4e-105 385.2 208 89.9
Lj3g0021719 Lotus japonicus HOM05D005750 ORTHO05D007126 4.4e-105 385.2 269 74.3
RcHm_v2.0_Chr3g0463971 Rosa chinensis HOM05D005750 ORTHO05D007126 1.3e-104 383.6 278 70.5
Lalb_Chr07g0193351 Lupinus albus HOM05D005750 ORTHO05D007126 1.7e-104 383.3 268 73.1
MD04G1146200 Malus domestica HOM05D005750 ORTHO05D007126 2.8e-104 382.5 264 74.2
COL.COLO4_14617 Corchorus olitorius HOM05D005750 ORTHO05D007126 6.3e-104 381.3 313 65.2
MD12G1159400 Malus domestica HOM05D005750 ORTHO05D007126 8.2e-104 380.9 270 73.7
Sed0027096 Sechium edule HOM05D005750 ORTHO05D007126 2.4e-103 379.4 261 74.3
ClCG10G021760 Citrullus lanatus HOM05D005750 ORTHO05D007126 4.1e-103 378.6 264 73.5
MELO3C009196.2 Cucumis melo HOM05D005750 ORTHO05D007126 5.3e-103 378.3 264 73.5
arahy.Tifrunner.gnm1.ann1.CU0EG8 Arachis hypogaea HOM05D005750 ORTHO05D007126 9.1e-103 377.5 283 68.6
CsaV3_3G034210 Cucumis sativus L. HOM05D005750 ORTHO05D007126 9.1e-103 377.5 264 73.1
FvH4_6g12170 Fragaria vesca HOM05D005750 ORTHO05D007126 1.2e-102 377.1 289 68.2
FAN09G4178 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.2e-102 377.1 289 68.2
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 2.7e-102 375.9 288 67.4
CiPaw.09G205200 Carya illinoinensis HOM05D005750 ORTHO05D007126 2.7e-102 375.9 284 68.7
FAN14G0046 Fragaria x ananassa HOM05D005750 ORTHO05D007126 3.5e-102 375.6 289 67.8
FAN14G1750 Fragaria x ananassa HOM05D005750 ORTHO05D007126 3.5e-102 375.6 289 67.8
FAN02G3889 Fragaria x ananassa HOM05D005750 ORTHO05D007126 4.5e-102 375.2 290 67.6
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 1.3e-101 373.6 268 73.1
Atru.chr8.2137 Acer truncatum HOM05D005750 ORTHO05D007126 2.2e-101 372.9 261 72.8
Dinv35517 Davidia involucrata HOM05D005750 ORTHO05D007126 2.9e-101 372.5 265 71.3
VMungo0331G1407 Vigna mungo HOM05D005750 ORTHO05D007126 8.5e-101 370.9 260 73.5
Actinidia13787 Actinidia chinensis HOM05D005750 ORTHO05D007126 1.1e-100 370.5 260 73.1
Dinv37089 Davidia involucrata HOM05D005750 ORTHO05D007126 1.1e-100 370.5 282 69.9
Phvul.010G008000 Phaseolus vulgaris HOM05D005750 ORTHO05D007126 1.9e-100 369.8 260 73.5
arahy.Tifrunner.gnm1.ann1.2Q187C Arachis hypogaea HOM05D005750 ORTHO05D007126 2.5e-100 369.4 283 67.8
CSS0046643 Camellia sinensis var. sinensis HOM05D005750 ORTHO05D007126 2.5e-100 369.4 262 71.0
Manes.09G101500 Manihot esculenta HOM05D005750 ORTHO05D007126 4.2e-100 368.6 282 67.7
Aqoxy1G00732 Aquilegia oxysepala HOM05D005750 ORTHO05D007126 5.5e-100 368.2 275 69.1
Psat7g247000 Pisum sativum HOM05D005750 ORTHO05D007126 9.4e-100 367.5 284 68.7
vmacro20231 Vaccinium macrocarpon HOM05D005750 ORTHO05D007126 9.4e-100 367.5 262 71.4
TPR.G5219 Trifolium pratense HOM05D005750 ORTHO05D007126 1.6e-99 366.7 283 68.6
Hund15288 Selenicereus undatus HOM05D005750 ORTHO05D007126 2.1e-99 366.3 281 68.3
CAN.G351.8 Capsicum annuum HOM05D005750 ORTHO05D007126 2.7e-99 365.9 277 68.2
TWI74G1070 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 2.7e-99 365.9 281 68.7
Lj2A78G34 Lonicera japonica HOM05D005750 ORTHO05D007126 3.6e-99 365.5 261 70.5
Medtr4g014710 Medicago truncatula HOM05D005750 ORTHO05D007126 8.0e-99 364.4 283 68.2
Potri.016G110300 Populus trichocarpa HOM05D005750 ORTHO05D007126 8.0e-99 364.4 283 67.1
TWI53G0977 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 1.4e-98 363.6 281 68.7
QL07p036167 Quercus lobata HOM05D005750 ORTHO05D007126 2.3e-98 362.8 284 68.0
Nitab4.5_0000119g0240 Nicotiana tabacum HOM05D005750 ORTHO05D007126 3.0e-98 362.5 280 67.9
DCAR_028833 Daucus carota HOM05D005750 ORTHO05D007126 4.0e-98 362.1 262 71.8
MBI14_g32934_MAGBIO Magnolia biondii HOM05D005750 ORTHO05D007126 5.2e-98 361.7 263 70.3
TAR636G2178 Trochodendron aralioides HOM05D005750 ORTHO05D007126 5.2e-98 361.7 272 68.4
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 1.2e-97 360.5 263 69.6
Peaxi162Scf00014g00091 Petunia axillaris HOM05D005750 ORTHO05D007126 2.6e-97 359.4 264 70.1
Sopen10g036170 Solanum pennellii HOM05D005750 ORTHO05D007126 2.6e-97 359.4 262 70.6
Eucgr.B02764 Eucalyptus grandis HOM05D005750 ORTHO05D007126 3.4e-97 359.0 275 66.5
EL10Ac5g11550 Beta vulgaris HOM05D005750 ORTHO05D007126 5.7e-97 358.2 263 70.0
PGR031G0365 Punica granatum HOM05D005750 ORTHO05D007126 1.3e-96 357.1 276 67.4
AUR62042943 Chenopodium quinoa HOM05D005750 ORTHO05D007126 2.8e-96 355.9 263 70.7
Glyma.03G076500 Glycine max HOM05D005750 ORTHO05D007126 2.8e-96 355.9 296 65.5
GSVIVG01034019001 Vitis vinifera HOM05D005750 ORTHO05D007126 3.7e-96 355.5 262 69.1
PSO384G4196 Papaver somniferum HOM05D005750 ORTHO05D007126 4.8e-96 355.1 266 67.3
TAR623G1708 Trochodendron aralioides HOM05D005750 ORTHO05D007126 4.8e-96 355.1 269 67.3
Cc06_g01740 Coffea canephora HOM05D005750 ORTHO05D007126 7.0e-95 351.3 270 68.1
PSO339G6575 Papaver somniferum HOM05D005750 ORTHO05D007126 1.2e-94 350.5 265 66.8
Sc01g0006740 Simmondsia chinensis HOM05D005750 ORTHO05D007126 2.0e-94 349.7 262 68.3
Lsat_1_v5_gn_8_99481 Lactuca sativa HOM05D005750 ORTHO05D007126 1.5e-92 343.6 208 78.8
HanXRQChr16g0510541 Helianthus annuus HOM05D005750 ORTHO05D007126 1.9e-92 343.2 210 78.1
CDE02G4717 Ceratophyllum demersum HOM05D005750 ORTHO05D007126 1.6e-91 340.1 259 66.0
Migut.J00232 Erythranthe guttata HOM05D005750 ORTHO05D007126 1.6e-91 340.1 249 69.1
unitig_46.g18409 Utricularia gibba HOM05D005750 ORTHO05D007126 2.8e-91 339.3 255 69.4
Sabra06G0073600 Salix brachista HOM05D005750 ORTHO05D007126 2.3e-90 336.3 325 56.9
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 2.3e-90 336.3 263 64.6
MSTRG.26795 Avicennia marina HOM05D005750 ORTHO05D007126 6.8e-90 334.7 258 66.7
Rhsim05G0204700 Rhododendron simsii HOM05D005750 ORTHO05D007126 4.4e-89 332.0 290 61.7
Potri.006G095700 Populus trichocarpa HOM05D005750 ORTHO05D007126 7.5e-89 331.3 211 76.3
Haze_20940 Corylus avellana HOM05D005750 ORTHO05D007126 2.8e-88 329.3 262 67.2
Sabra16G0106800 Salix brachista HOM05D005750 ORTHO05D007126 6.3e-88 328.2 284 62.7
Oeu004613.2 Olea europaea HOM05D005750 ORTHO05D007126 1.1e-87 327.4 293 59.7
Hma1.2p1_0763F.1_g214560 Hydrangea macrophylla HOM05D005750 ORTHO05D007126 3.1e-87 325.9 266 62.8
Os01g0851400 Oryza sativa ssp. japonica HOM05D005750 ORTHO05D007126 4.1e-87 325.5 279 61.6
Zm00001eb367490 Zea mays HOM05D005750 ORTHO05D007126 9.2e-87 324.3 288 58.7
SGA_v2.0_scaffold240G44116 Striga asiatica HOM05D005750 ORTHO05D007126 5.9e-86 321.6 197 76.6
Zm00001eb147810 Zea mays HOM05D005750 ORTHO05D007126 1.2e-83 313.9 294 58.8
SEGI_00199 Sequoiadendron giganteum HOM05D005750 ORTHO05D007126 8.9e-82 307.8 276 58.7
Gohir.D04G128250 Gossypium hirsutum HOM05D005750 ORTHO05D007126 1.2e-75 287.3 265 58.1
Actinidia29137 Actinidia chinensis HOM05D005750 ORTHO05D007126 5.2e-74 282.0 238 65.1
Gorai.012G111300 Gossypium raimondii HOM05D005750 ORTHO05D007126 1.2e-73 280.8 265 57.4
CiPaw.10G154000 Carya illinoinensis HOM05D005750 ORTHO05D007126 7.0e-71 271.6 276 55.8
HPP92_018186 Vanilla planifolia HOM05D005750 ORTHO05D007126 1.2e-70 270.8 263 57.0
SGA_v2.0_scaffold85G26769 Striga asiatica HOM05D005750 ORTHO05D007126 3.9e-69 265.8 203 65.5
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 9.5e-68 261.2 207 62.8
Ca_23809_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 2.8e-67 259.6 203 66.5
ECA236G1744 Erigeron canadensis HOM05D005750 ORTHO05D007126 8.9e-66 254.6 209 63.6
Nn2g13588 Nelumbo nucifera HOM05D005750 ORTHO05D007126 3.2e-63 246.1 238 57.6
CBR_g865 Chara braunii HOM05D005750 ORTHO05D007126 3.9e-61 239.2 276 46.7
PGSC0003DMG400019130 Solanum tuberosum HOM05D005750 ORTHO05D007126 8.6e-61 238.0 182 67.0
AUR62025787 Chenopodium quinoa HOM05D005750 ORTHO05D007126 8.1e-59 231.5 182 66.5
Pp3c7_8520 Physcomitrium patens HOM05D005750 ORTHO05D007126 2.4e-58 229.9 204 53.4
Solyc10g086770.3 Solanum lycopersicum HOM05D005750 ORTHO05D007126 2.6e-57 226.5 182 64.8
AagrBONN_evm.TU.Sc2ySwM_344.3267 Anthoceros agrestis HOM05D005750 ORTHO05D007126 3.4e-57 226.1 208 53.8
SMO203G0145 Selaginella moellendorffii HOM05D005750 ORTHO05D007126 6.9e-50 201.8 170 57.6
Nitab4.5_0006439g0020 Nicotiana tabacum HOM05D005750 ORTHO05D007126 5.6e-44 182.2 111 81.1
Cre11.g475450 Chlamydomonas reinhardtii HOM05D005750 ORTHO05D007126 2.8e-43 179.9 195 47.2
TAR636G1840 Trochodendron aralioides HOM05D005750 ORTHO05D007126 7.4e-36 155.2 232 42.7
MCO10G202 Micromonas commoda HOM05D005750 ORTHO05D007126 3.1e-34 149.8 299 33.8
TAR402G0002 Trochodendron aralioides HOM05D005750 ORTHO05D007126 2.3e-29 133.7 84 79.8
PRCOL_00002333 Prasinoderma coloniale HOM05D005750 ORTHO05D007126 9.6e-28 128.3 283 32.9
Haze_26299 Corylus avellana HOM05D005750 ORTHO05D007126 6.9e-26 122.1 170 37.6
Ca_23812_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 8.4e-24 115.2 80 76.2
A04p05660 Brassica napus HOM05D005750 ORTHO05D007126 3.5e-22 109.8 52 100.0
ATR0618G451 Amborella trichopoda HOM05D005750 ORTHO05D007126 4.3e-20 102.8 57 84.2
Nn2g11345 Nelumbo nucifera HOM05D005750 ORTHO05D007126 1.6e-19 100.9 54 87.0
Glyma.14G192300 Glycine max HOM05D005325 ORTHO05D008457 2.5e-07 60.5 178 29.8
Cpa.g.sc112.50 Carica papaya HOM05D005325 ORTHO05D008457 3.2e-07 60.1 182 28.0
GSVIVG01024786001 Vitis vinifera HOM05D005325 ORTHO05D008457 5.5e-07 59.3 175 27.4
arahy.Tifrunner.gnm1.ann1.VY3BKH Arachis hypogaea HOM05D005325 ORTHO05D008457 1.2e-06 58.2 175 29.7
CANSAT54G0458 Cannabis sativa HOM05D005325 ORTHO05D008457 2.1e-06 57.4 181 27.6
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 2.1e-06 57.4 186 27.4
arahy.Tifrunner.gnm1.ann1.CQ7B2G Arachis hypogaea HOM05D005325 ORTHO05D008457 4.7e-06 56.2 173 29.5
FvH4_5g19731 Fragaria vesca HOM05D005750 ORTHO05D035649 4.7e-06 56.2 56 58.9
AagrBONN_evm.TU.Sc2ySwM_362.272 Anthoceros agrestis HOM05D005325 ORTHO05D008457 6.1e-06 55.8 177 26.0
LjContig00155g0003403 Lotus japonicus HOM05D005325 ORTHO05D008457 6.1e-06 55.8 178 29.2
Actinidia25148 Actinidia chinensis HOM05D005325 ORTHO05D008457 7.9e-06 55.5 173 27.2


User provided reference genes

Program Settings