Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p05660 Brassica napus HOM05D005750 ORTHO05D007126 1.3e-31 139.0 67 100.0
A04p05670 Brassica napus HOM05D005750 ORTHO05D007126 3.8e-23 110.9 52 100.0
BraA04t16263Z Brassica rapa HOM05D005750 ORTHO05D007126 8.4e-23 109.8 52 98.1
Thhalv10010608m.g Eutrema salsugineum HOM05D005750 ORTHO05D007126 2.4e-22 108.2 52 98.1
BcaB02g08472 Brassica carinata HOM05D005750 ORTHO05D007126 5.4e-22 107.1 52 96.2
BcaC02g09095 Brassica carinata HOM05D005750 ORTHO05D007126 5.4e-22 107.1 52 96.2
C04p38380 Brassica napus HOM05D005750 ORTHO05D007126 5.4e-22 107.1 52 96.2
BolC4t25415H Brassica oleracea HOM05D005750 ORTHO05D007126 5.4e-22 107.1 52 96.2
AL5G35150 Arabidopsis lyrata HOM05D005750 ORTHO05D007126 1.2e-21 105.9 52 94.2
AT3G54130 Arabidopsis thaliana HOM05D005750 ORTHO05D007126 1.2e-21 105.9 52 94.2
Sp5g08260 Schrenkiella parvula HOM05D005750 ORTHO05D007126 1.2e-21 105.9 52 94.2
THA.LOC104823389 Tarenaya hassleriana HOM05D005750 ORTHO05D007126 2.1e-21 105.1 52 94.2
Aa31sc171G20 Aethionema arabicum HOM05D005750 ORTHO05D007126 3.5e-21 104.4 52 92.3
A09p47130 Brassica napus HOM05D005750 ORTHO05D007126 3.5e-21 104.4 52 94.2
C08p29390 Brassica napus HOM05D005750 ORTHO05D007126 3.5e-21 104.4 52 94.2
BolC8t50540H Brassica oleracea HOM05D005750 ORTHO05D007126 3.5e-21 104.4 52 94.2
BraA09t40175Z Brassica rapa HOM05D005750 ORTHO05D007126 3.5e-21 104.4 52 94.2
BcaB01g00216 Brassica carinata HOM05D005750 ORTHO05D007126 4.6e-21 104.0 52 92.3
Carub.0005s2072 Capsella rubella HOM05D005750 ORTHO05D007126 6.0e-21 103.6 52 92.3
CARHR164010 Cardamine hirsuta HOM05D005750 ORTHO05D007126 6.0e-21 103.6 52 90.4
Lalb_Chr07g0193351 Lupinus albus HOM05D005750 ORTHO05D007126 2.3e-20 101.7 56 85.7
Nn2g11345 Nelumbo nucifera HOM05D005750 ORTHO05D007126 3.0e-20 101.3 57 82.5
Phvul.010G008000 Phaseolus vulgaris HOM05D005750 ORTHO05D007126 3.0e-20 101.3 56 83.9
Sabra06G0073600 Salix brachista HOM05D005750 ORTHO05D007126 3.0e-20 101.3 61 78.7
Haze_20940 Corylus avellana HOM05D005750 ORTHO05D007126 3.9e-20 100.9 52 90.4
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 3.9e-20 100.9 56 83.9
Potri.006G095700 Populus trichocarpa HOM05D005750 ORTHO05D007126 3.9e-20 100.9 52 90.4
VMungo0331G1407 Vigna mungo HOM05D005750 ORTHO05D007126 3.9e-20 100.9 56 83.9
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 5.1e-20 100.5 52 88.5
arahy.Tifrunner.gnm1.ann1.2Q187C Arachis hypogaea HOM05D005750 ORTHO05D007126 6.7e-20 100.1 61 75.4
arahy.Tifrunner.gnm1.ann1.CU0EG8 Arachis hypogaea HOM05D005750 ORTHO05D007126 6.7e-20 100.1 61 75.4
Potri.016G110300 Populus trichocarpa HOM05D005750 ORTHO05D007126 6.7e-20 100.1 52 90.4
TAR402G0002 Trochodendron aralioides HOM05D005750 ORTHO05D007126 6.7e-20 100.1 52 88.5
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 8.7e-20 99.8 52 88.5
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 8.7e-20 99.8 52 88.5
MD04G1146200 Malus domestica HOM05D005750 ORTHO05D007126 8.7e-20 99.8 52 88.5
MD12G1159400 Malus domestica HOM05D005750 ORTHO05D007126 8.7e-20 99.8 52 88.5
Prupe.6G269800 Prunus persica HOM05D005750 ORTHO05D007126 8.7e-20 99.8 52 88.5
QL07p036167 Quercus lobata HOM05D005750 ORTHO05D007126 8.7e-20 99.8 52 88.5
Sed0027096 Sechium edule HOM05D005750 ORTHO05D007126 8.7e-20 99.8 52 88.5
TPR.G5219 Trifolium pratense HOM05D005750 ORTHO05D007126 8.7e-20 99.8 52 88.5
TWI74G1070 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 8.7e-20 99.8 52 88.5
Actinidia13787 Actinidia chinensis HOM05D005750 ORTHO05D007126 1.1e-19 99.4 52 88.5
Aqoxy1G00732 Aquilegia oxysepala HOM05D005750 ORTHO05D007126 1.1e-19 99.4 52 88.5
COL.COLO4_14617 Corchorus olitorius HOM05D005750 ORTHO05D007126 1.1e-19 99.4 52 88.5
Dinv35517 Davidia involucrata HOM05D005750 ORTHO05D007126 1.1e-19 99.4 52 88.5
Dinv37089 Davidia involucrata HOM05D005750 ORTHO05D007126 1.1e-19 99.4 52 88.5
Duzib128G1738 Durio zibethinus HOM05D005750 ORTHO05D007126 1.1e-19 99.4 52 88.5
Manes.09G101500 Manihot esculenta HOM05D005750 ORTHO05D007126 1.1e-19 99.4 52 90.4
Sopen10g036170 Solanum pennellii HOM05D005750 ORTHO05D007126 1.1e-19 99.4 52 88.5
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 1.1e-19 99.4 52 88.5
vmacro20231 Vaccinium macrocarpon HOM05D005750 ORTHO05D007126 1.1e-19 99.4 52 88.5
CDE02G4717 Ceratophyllum demersum HOM05D005750 ORTHO05D007126 1.5e-19 99.0 52 86.5
Glyma.03G076500 Glycine max HOM05D005750 ORTHO05D007126 1.5e-19 99.0 55 83.6
Cc06_g01740 Coffea canephora HOM05D005750 ORTHO05D007126 1.9e-19 98.6 52 86.5
Eucgr.B02764 Eucalyptus grandis HOM05D005750 ORTHO05D007126 1.9e-19 98.6 52 86.5
FvH4_6g12170 Fragaria vesca HOM05D005750 ORTHO05D007126 1.9e-19 98.6 52 86.5
FAN02G3889 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.9e-19 98.6 52 86.5
FAN09G4178 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.9e-19 98.6 52 86.5
FAN14G0046 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.9e-19 98.6 52 86.5
FAN14G1750 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.9e-19 98.6 52 86.5
Lj2A78G34 Lonicera japonica HOM05D005750 ORTHO05D007126 1.9e-19 98.6 52 88.5
Nitab4.5_0000119g0240 Nicotiana tabacum HOM05D005750 ORTHO05D007126 1.9e-19 98.6 52 88.5
Nitab4.5_0006439g0020 Nicotiana tabacum HOM05D005750 ORTHO05D007126 1.9e-19 98.6 52 88.5
PGR031G0365 Punica granatum HOM05D005750 ORTHO05D007126 1.9e-19 98.6 52 86.5
RcHm_v2.0_Chr3g0463971 Rosa chinensis HOM05D005750 ORTHO05D007126 1.9e-19 98.6 52 86.5
EL10Ac5g11550 Beta vulgaris HOM05D005750 ORTHO05D007126 2.5e-19 98.2 52 88.5
CAN.G351.8 Capsicum annuum HOM05D005750 ORTHO05D007126 2.5e-19 98.2 52 86.5
Ca_23812_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 2.5e-19 98.2 52 88.5
Lj3g0021719 Lotus japonicus HOM05D005750 ORTHO05D007126 2.5e-19 98.2 52 88.5
Medtr4g014710 Medicago truncatula HOM05D005750 ORTHO05D007126 2.5e-19 98.2 52 88.5
Ciclev10012396m.g Citrus clementina HOM05D005750 ORTHO05D007126 3.3e-19 97.8 52 86.5
CiPaw.09G205200 Carya illinoinensis HOM05D005750 ORTHO05D007126 4.3e-19 97.4 52 84.6
AUR62042943 Chenopodium quinoa HOM05D005750 ORTHO05D007126 4.3e-19 97.4 52 86.5
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 4.3e-19 97.4 52 86.5
MBI14_g32934_MAGBIO Magnolia biondii HOM05D005750 ORTHO05D007126 4.3e-19 97.4 51 88.2
Peaxi162Scf00014g00091 Petunia axillaris HOM05D005750 ORTHO05D007126 4.3e-19 97.4 49 91.8
Hund15288 Selenicereus undatus HOM05D005750 ORTHO05D007126 4.3e-19 97.4 52 86.5
TWI53G0977 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 4.3e-19 97.4 52 86.5
CSS0046643 Camellia sinensis var. sinensis HOM05D005750 ORTHO05D007126 5.6e-19 97.1 52 86.5
CANSAT35G0049 Cannabis sativa HOM05D005750 ORTHO05D007126 5.6e-19 97.1 52 86.5
Hma1.2p1_0763F.1_g214560 Hydrangea macrophylla HOM05D005750 ORTHO05D007126 5.6e-19 97.1 52 84.6
Sabra16G0106800 Salix brachista HOM05D005750 ORTHO05D007126 5.6e-19 97.1 52 88.5
HPP92_018186 Vanilla planifolia HOM05D005750 ORTHO05D007126 5.6e-19 97.1 52 86.5
ClCG10G021760 Citrullus lanatus HOM05D005750 ORTHO05D007126 7.4e-19 96.7 52 84.6
MELO3C009196.2 Cucumis melo HOM05D005750 ORTHO05D007126 7.4e-19 96.7 52 84.6
CsaV3_3G034210 Cucumis sativus L. HOM05D005750 ORTHO05D007126 7.4e-19 96.7 52 84.6
Rhsim05G0204700 Rhododendron simsii HOM05D005750 ORTHO05D007126 7.4e-19 96.7 52 86.5
TAR636G2178 Trochodendron aralioides HOM05D005750 ORTHO05D007126 9.6e-19 96.3 52 84.6
ATR0618G451 Amborella trichopoda HOM05D005750 ORTHO05D007126 1.3e-18 95.9 52 84.6
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 1.3e-18 95.9 52 84.6
Sc01g0006740 Simmondsia chinensis HOM05D005750 ORTHO05D007126 1.3e-18 95.9 52 84.6
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 1.6e-18 95.5 52 84.6
Psat7g247000 Pisum sativum HOM05D005750 ORTHO05D007126 1.6e-18 95.5 52 84.6
TAR623G1708 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.6e-18 95.5 52 82.7
DCAR_028833 Daucus carota HOM05D005750 ORTHO05D007126 2.8e-18 94.7 52 84.6
PSO384G4196 Papaver somniferum HOM05D005750 ORTHO05D007126 2.8e-18 94.7 49 85.7
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 3.6e-18 94.4 52 80.8
Atru.chr8.2137 Acer truncatum HOM05D005750 ORTHO05D007126 4.8e-18 94.0 48 89.6
HanXRQChr16g0510541 Helianthus annuus HOM05D005750 ORTHO05D007126 4.8e-18 94.0 52 82.7
PSO339G6575 Papaver somniferum HOM05D005750 ORTHO05D007126 4.8e-18 94.0 48 87.5
SGA_v2.0_scaffold240G44116 Striga asiatica HOM05D005750 ORTHO05D007126 4.8e-18 94.0 48 89.6
Zm00001eb147810 Zea mays HOM05D005750 ORTHO05D007126 6.2e-18 93.6 51 80.4
Zm00001eb367490 Zea mays HOM05D005750 ORTHO05D007126 6.2e-18 93.6 51 80.4
Lsat_1_v5_gn_8_99481 Lactuca sativa HOM05D005750 ORTHO05D007126 1.1e-17 92.8 52 82.7
MSTRG.26795 Avicennia marina HOM05D005750 ORTHO05D007126 1.4e-17 92.4 48 87.5
Migut.J00232 Erythranthe guttata HOM05D005750 ORTHO05D007126 1.4e-17 92.4 48 87.5
GSVIVG01034019001 Vitis vinifera HOM05D005750 ORTHO05D007126 2.4e-17 91.7 52 80.8
unitig_46.g18409 Utricularia gibba HOM05D005750 ORTHO05D007126 9.0e-17 89.7 47 85.1
Os01g0851400 Oryza sativa ssp. japonica HOM05D005750 ORTHO05D007126 1.2e-16 89.4 48 81.2
SEGI_00199 Sequoiadendron giganteum HOM05D005750 ORTHO05D007126 4.5e-16 87.4 54 72.2
CiPaw.10G154000 Carya illinoinensis HOM05D005750 ORTHO05D007126 9.9e-16 86.3 44 88.6
Oeu004613.2 Olea europaea HOM05D005750 ORTHO05D007126 1.7e-15 85.5 44 88.6
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 2.4e-14 81.6 52 69.2
AagrBONN_evm.TU.Sc2ySwM_344.3267 Anthoceros agrestis HOM05D005750 ORTHO05D007126 7.1e-14 80.1 53 66.0
SGA_v2.0_scaffold85G26769 Striga asiatica HOM05D005750 ORTHO05D007126 1.6e-13 79.0 46 76.1
SMO203G0145 Selaginella moellendorffii HOM05D005750 ORTHO05D007126 1.9e-11 72.0 42 71.4
Pp3c7_8520 Physcomitrium patens HOM05D005750 ORTHO05D007126 2.5e-11 71.6 44 68.2
CBR_g865 Chara braunii HOM05D005750 ORTHO05D007126 2.1e-10 68.6 55 54.5
Gohir.D04G128250 Gossypium hirsutum HOM05D005750 ORTHO05D007126 6.2e-10 67.0 36 86.1
Gorai.012G111300 Gossypium raimondii HOM05D005750 ORTHO05D007126 4.0e-09 64.3 36 83.3
Cre11.g475450 Chlamydomonas reinhardtii HOM05D005750 ORTHO05D007126 4.5e-08 60.8 44 61.4
MCO10G202 Micromonas commoda HOM05D005750 ORTHO05D007126 1.7e-07 58.9 54 46.3
Haze_26299 Corylus avellana HOM05D005750 ORTHO05D007126 8.4e-07 56.6 53 41.5


User provided reference genes

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