Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p63670 Brassica napus HOM05D001239 ORTHO05D011709 1.9e-47 192.2 101 100.0
BraA03t15438Z Brassica rapa HOM05D001239 ORTHO05D011709 1.9e-47 192.2 101 100.0
BcaC09g49677 Brassica carinata HOM05D000496 ORTHO05D011709 1.4e-13 79.7 83 50.6
C01p34040 Brassica napus HOM05D001239 ORTHO05D011709 2.4e-13 79.0 83 50.6
BolC2t10713H Brassica oleracea HOM05D001239 ORTHO05D011709 1.3e-11 73.2 87 49.4
BcaC03g17089 Brassica carinata HOM05D025306 ORTHO05D011709 1.7e-11 72.8 77 54.5
BolC5t30244H Brassica oleracea HOM05D001239 ORTHO05D011709 5.0e-11 71.2 95 47.4
BolC1t03373H Brassica oleracea HOM05D001239 ORTHO05D011709 6.5e-11 70.9 75 50.7
C09p42620 Brassica napus HOM05D001239 ORTHO05D011709 1.5e-10 69.7 77 46.8
BcaC01g03871 Brassica carinata HOM05D001239 ORTHO05D011709 3.2e-10 68.6 70 51.4
C01p30110 Brassica napus HOM05D001239 ORTHO05D023908 3.2e-10 68.6 61 59.0
BcaC08g44422 Brassica carinata HOM05D001239 ORTHO05D017499 2.1e-09 65.9 75 44.0
C06p18600 Brassica napus HOM05D001239 ORTHO05D017499 2.1e-09 65.9 75 44.0
BolC6t37073H Brassica oleracea HOM05D001239 ORTHO05D017499 2.1e-09 65.9 75 44.0
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 8.0e-09 63.9 82 41.5
C04p30980 Brassica napus HOM05D001035 ORTHO05D021752 8.0e-09 63.9 68 52.9
BcaC05g25304 Brassica carinata HOM05D000508 ORTHO05D000371 1.4e-08 63.2 83 43.4
C05p11830 Brassica napus HOM05D001239 ORTHO05D033080 1.4e-08 63.2 83 43.4
BcaC04g19167 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-08 62.8 63 49.2
BcaC06g36045 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-08 62.4 59 50.8
BcaC01g02173 Brassica carinata HOM05D001239 ORTHO05D017499 3.0e-08 62.0 59 49.2
C03p67910 Brassica napus HOM05D001239 ORTHO05D017499 3.0e-08 62.0 59 49.2
C07p03520 Brassica napus HOM05D001239 ORTHO05D027739 3.0e-08 62.0 59 47.5
BolC1t02956H Brassica oleracea HOM05D001239 ORTHO05D023908 3.0e-08 62.0 56 58.9
C04p33720 Brassica napus HOM05D031458 ORTHO05D027524 5.2e-08 61.2 55 56.4
BolC4t24940H Brassica oleracea HOM05D031458 ORTHO05D027524 5.2e-08 61.2 55 56.4
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-07 60.1 55 50.9
A01p18960 Brassica napus HOM05D014076 ORTHO05D021903 1.1e-07 60.1 51 60.8
BraA01t01837Z Brassica rapa HOM05D014076 ORTHO05D021903 1.1e-07 60.1 51 60.8
BcaB07g33550 Brassica carinata HOM05D001239 ORTHO05D011709 1.5e-07 59.7 54 59.3
BcaB03g11924 Brassica carinata HOM05D001239 ORTHO05D011709 2.6e-07 58.9 60 48.3
BcaC01g01482 Brassica carinata HOM05D009238 ORTHO05D021611 3.3e-07 58.5 92 39.1
BolC4t26715H Brassica oleracea HOM05D001239 ORTHO05D011709 3.3e-07 58.5 60 45.0
BraA04t17766Z Brassica rapa HOM05D001239 ORTHO05D024427 3.3e-07 58.5 64 43.8
BcaC02g10000 Brassica carinata HOM05D016295 ORTHO05D017554 4.4e-07 58.2 53 54.7
BcaC07g40131 Brassica carinata HOM05D014076 ORTHO05D000006 5.7e-07 57.8 58 50.0
BcaB01g01785 Brassica carinata HOM05D000496 ORTHO05D000925 7.5e-07 57.4 55 49.1
BcaB04g18066 Brassica carinata HOM05D001239 ORTHO05D023908 7.5e-07 57.4 74 43.2
BcaC02g09195 Brassica carinata HOM05D001239 ORTHO05D031919 7.5e-07 57.4 55 50.9
A06p35270 Brassica napus HOM05D000591 ORTHO05D000579 7.5e-07 57.4 49 59.2
C03p49130 Brassica napus HOM05D014076 ORTHO05D024532 7.5e-07 57.4 87 42.5
BraA09t38239Z Brassica rapa HOM05D014076 ORTHO05D021903 7.5e-07 57.4 50 58.0
A05p24750 Brassica napus HOM05D002138 ORTHO05D002106 9.7e-07 57.0 89 41.6
BraA06t26451Z Brassica rapa HOM05D001307 ORTHO05D001158 9.7e-07 57.0 83 41.0
C09p49690 Brassica napus HOM05D001239 ORTHO05D011709 1.3e-06 56.6 72 41.7
BraA09t38523Z Brassica rapa HOM05D027742 ORTHO05D027054 1.3e-06 56.6 83 44.6
BcaC01g05559 Brassica carinata HOM05D001239 ORTHO05D011709 1.7e-06 56.2 58 44.8
BolC7t40747H Brassica oleracea HOM05D001239 ORTHO05D027739 1.7e-06 56.2 53 49.1
BcaB03g15929 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-06 55.8 72 40.3
BolC5t29932H Brassica oleracea HOM05D001239 ORTHO05D033080 2.8e-06 55.5 76 43.4
BcaC05g27311 Brassica carinata HOM05D001239 ORTHO05D011709 3.7e-06 55.1 48 54.2
CARHR154060 Cardamine hirsuta HOM05D001239 ORTHO05D011709 3.7e-06 55.1 55 49.1
BcaB06g26119 Brassica carinata HOM05D001239 ORTHO05D011709 4.8e-06 54.7 54 51.9
BolC1t05632H Brassica oleracea HOM05D014076 ORTHO05D021903 4.8e-06 54.7 50 56.0
C03p49160 Brassica napus HOM05D014076 ORTHO05D024532 6.3e-06 54.3 59 47.5
BolC3t17197H Brassica oleracea HOM05D014076 ORTHO05D024532 6.3e-06 54.3 59 47.5
BolC4t26060H Brassica oleracea HOM05D009238 ORTHO05D012489 6.3e-06 54.3 78 41.0
BcaC02g12033 Brassica carinata HOM05D001239 ORTHO05D011709 8.2e-06 53.9 52 44.2
C07p05770 Brassica napus HOM05D001239 ORTHO05D011709 8.2e-06 53.9 43 60.5
BolC6t38778H Brassica oleracea HOM05D009238 ORTHO05D012489 8.2e-06 53.9 77 40.3


User provided reference genes

Program Settings