Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p58430 Brassica napus HOM05D006778 ORTHO05D008341 9.1e-78 293.9 195 100.0
C07p56450 Brassica napus HOM05D006778 ORTHO05D008341 1.2e-61 240.4 208 83.2
BolC7t46124H Brassica oleracea HOM05D006778 ORTHO05D008341 1.6e-61 240.0 208 82.7
BraA03t14903Z Brassica rapa HOM05D006778 ORTHO05D008341 3.2e-46 189.1 155 92.3
Sp7g26820 Schrenkiella parvula HOM05D006778 ORTHO05D008341 9.5e-43 177.6 202 55.4
BcaNung01362 Brassica carinata HOM05D006778 ORTHO05D008341 6.2e-42 174.9 199 54.8
BcaC09g51658 Brassica carinata HOM05D006778 ORTHO05D008341 8.1e-42 174.5 200 56.5
A01p09090 Brassica napus HOM05D006778 ORTHO05D008341 4.9e-39 165.2 210 52.4
AT4G28820 Arabidopsis thaliana HOM05D006778 ORTHO05D008341 2.4e-38 162.9 206 52.9
Carub.0007s1182 Capsella rubella HOM05D006778 ORTHO05D008341 2.8e-34 149.4 202 62.4
AL7G23670 Arabidopsis lyrata HOM05D006778 ORTHO05D008341 4.0e-33 145.6 229 45.9
BolC1t01026H Brassica oleracea HOM05D006778 ORTHO05D008341 6.9e-33 144.8 210 48.1
Thhalv10026155m.g Eutrema salsugineum HOM05D006778 ORTHO05D008341 1.2e-32 144.1 201 63.7
C01p10640 Brassica napus HOM05D006778 ORTHO05D008341 1.3e-31 140.6 207 58.5
THA.LOC104820057 Tarenaya hassleriana HOM05D006778 ORTHO05D008341 1.1e-30 137.5 198 44.9
BraA01t00857Z Brassica rapa HOM05D006778 ORTHO05D008341 3.9e-28 129.0 205 57.6
CARHR236610 Cardamine hirsuta HOM05D006778 ORTHO05D008341 5.1e-28 128.6 211 44.5
Aa31LG2G21570 Aethionema arabicum HOM05D006778 ORTHO05D008341 4.9e-23 112.1 192 40.1
CiPaw.04G108200 Carya illinoinensis HOM05D006778 ORTHO05D008341 3.9e-20 102.4 198 51.5
Cpa.g.sc8.198 Carica papaya HOM05D006778 ORTHO05D008341 2.5e-19 99.8 198 35.4
Manes.12G043800 Manihot esculenta HOM05D006778 ORTHO05D008341 9.6e-19 97.8 191 35.6
QL07p037469 Quercus lobata HOM05D006778 ORTHO05D008341 9.6e-19 97.8 198 38.4
Glyma.10G042900 Glycine max HOM05D006778 ORTHO05D008341 8.1e-18 94.7 198 36.9
Cfa002523 Carpinus fangiana HOM05D006778 ORTHO05D008341 3.1e-17 92.8 199 35.7
Lj3g0024250 Lotus japonicus HOM05D006778 ORTHO05D008341 3.1e-17 92.8 189 38.1
CiPaw.03G152900 Carya illinoinensis HOM05D006778 ORTHO05D008341 9.0e-17 91.3 195 35.9
FAN15G2222 Fragaria x ananassa HOM05D006778 ORTHO05D008341 1.2e-16 90.9 185 36.8
vmacro02733 Vaccinium macrocarpon HOM05D006778 ORTHO05D008341 3.4e-16 89.4 198 48.0
Sabra02G0191900 Salix brachista HOM05D006778 ORTHO05D008341 4.5e-16 89.0 187 38.0
RcHm_v2.0_Chr6g0285481 Rosa chinensis HOM05D006778 ORTHO05D008341 5.8e-16 88.6 191 37.7
Thecc.01G232400 Theobroma cacao HOM05D006778 ORTHO05D008341 5.8e-16 88.6 202 32.7
Gorai.004G223900 Gossypium raimondii HOM05D006778 ORTHO05D008341 9.9e-16 87.8 203 33.0
MD05G1182200 Malus domestica HOM05D006778 ORTHO05D008341 9.9e-16 87.8 190 37.4
FvH4_2g19780 Fragaria vesca HOM05D006778 ORTHO05D008341 1.3e-15 87.4 185 37.3
Prupe.8G209000 Prunus persica HOM05D006778 ORTHO05D008341 1.3e-15 87.4 190 36.8
Actinidia37573 Actinidia chinensis HOM05D006778 ORTHO05D008341 1.7e-15 87.0 202 35.1
Gohir.D08G211201 Gossypium hirsutum HOM05D006778 ORTHO05D008341 1.7e-15 87.0 196 34.7
Lalb_Chr21g0314231 Lupinus albus HOM05D006778 ORTHO05D008341 1.7e-15 87.0 189 34.9
Phvul.007G156300 Phaseolus vulgaris HOM05D006778 ORTHO05D008341 1.7e-15 87.0 198 35.9
Potri.002G252700 Populus trichocarpa HOM05D006778 ORTHO05D008341 1.7e-15 87.0 187 38.0
Glyma.13G130200 Glycine max HOM05D006778 ORTHO05D008341 2.2e-15 86.7 194 34.5
Gohir.A08G193200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 2.2e-15 86.7 200 33.5
AUR62031811 Chenopodium quinoa HOM05D006778 ORTHO05D008341 2.9e-15 86.3 194 37.1
Lj5g0022938 Lotus japonicus HOM05D006778 ORTHO05D008341 2.9e-15 86.3 198 35.9
Psat6g064720 Pisum sativum HOM05D006778 ORTHO05D008341 2.9e-15 86.3 190 36.3
GSVIVG01028519001 Vitis vinifera HOM05D006778 ORTHO05D008341 2.9e-15 86.3 191 33.5
Migut.D00505 Erythranthe guttata HOM05D006778 ORTHO05D008341 3.8e-15 85.9 194 30.9
TPR.G33801 Trifolium pratense HOM05D006778 ORTHO05D008341 4.9e-15 85.5 190 36.3
SGA_v2.0_scaffold8G04666 Striga asiatica HOM05D006778 ORTHO05D008341 8.4e-15 84.7 185 34.1
Duzib133G1327 Durio zibethinus HOM05D006778 ORTHO05D008341 2.4e-14 83.2 209 31.6
ECA247G0226 Erigeron canadensis HOM05D000070 ORTHO05D003190 3.2e-14 82.8 191 33.0
CANSAT01G2408 Cannabis sativa HOM05D006778 ORTHO05D008341 5.5e-14 82.0 191 34.0
CANSAT01G3118 Cannabis sativa HOM05D006778 ORTHO05D008341 7.1e-14 81.6 191 34.0
Medtr1g069150 Medicago truncatula HOM05D006778 ORTHO05D008341 1.2e-13 80.9 190 34.7
EL10Ac7g17819 Beta vulgaris HOM05D006778 ORTHO05D008341 2.1e-13 80.1 179 34.1
DCAR_012626 Daucus carota HOM05D006778 ORTHO05D008341 4.6e-13 79.0 188 35.1
TAR362G0656 Trochodendron aralioides HOM05D006778 ORTHO05D008341 4.6e-13 79.0 192 33.9
arahy.Tifrunner.gnm1.ann1.PE83GC Arachis hypogaea HOM05D006778 ORTHO05D008341 6.0e-13 78.6 195 31.8
ClCG07G001620 Citrullus lanatus HOM05D006778 ORTHO05D008341 1.0e-12 77.8 201 34.3
arahy.Tifrunner.gnm1.ann1.01AYHN Arachis hypogaea HOM05D006778 ORTHO05D008341 1.3e-12 77.4 195 31.8
Pp3c19_5220 Physcomitrium patens HOM05D006778 ORTHO05D008341 1.8e-12 77.0 187 33.2
Sed0012724 Sechium edule HOM05D006778 ORTHO05D008341 1.8e-12 77.0 195 33.3
Nitab4.5_0003180g0010 Nicotiana tabacum HOM05D006778 ORTHO05D008341 3.0e-12 76.3 193 32.6
Rhsim13G0042100 Rhododendron simsii HOM05D006778 ORTHO05D008341 3.0e-12 76.3 193 32.6
COL.COLO4_28579 Corchorus olitorius HOM05D006778 ORTHO05D008341 8.7e-12 74.7 193 31.1
MELO3C026499.2 Cucumis melo HOM05D006778 ORTHO05D008341 8.7e-12 74.7 187 34.8
CAN.G941.43 Capsicum annuum HOM05D006778 ORTHO05D008341 1.9e-11 73.6 194 30.9
PGR044G1830 Punica granatum HOM05D006778 ORTHO05D008341 1.9e-11 73.6 194 29.4
FAN24G1005 Fragaria x ananassa HOM05D006778 ORTHO05D008341 2.5e-11 73.2 205 31.7
Nn1g03098 Nelumbo nucifera HOM05D006778 ORTHO05D008341 2.5e-11 73.2 194 34.0
Solyc06g008020.3 Solanum lycopersicum HOM05D006778 ORTHO05D008341 2.5e-11 73.2 186 30.6
Aqoxy2G03836 Aquilegia oxysepala HOM05D006778 ORTHO05D008341 4.3e-11 72.4 189 29.6
Nitab4.5_0001740g0070 Nicotiana tabacum HOM05D006778 ORTHO05D008341 4.3e-11 72.4 186 32.3
CsaV3_6G036140 Cucumis sativus L. HOM05D006778 ORTHO05D008341 5.6e-11 72.0 184 34.2
ATR0787G018 Amborella trichopoda HOM05D006778 ORTHO05D008341 9.6e-11 71.2 186 29.0
Cc01_g17420 Coffea canephora HOM05D006778 ORTHO05D008341 3.7e-10 69.3 185 31.9
Dinv19236 Davidia involucrata HOM05D006778 ORTHO05D008341 1.4e-09 67.4 162 50.6
Mapoly0102s0014 Marchantia polymorpha HOM05D006778 ORTHO05D008341 2.4e-09 66.6 192 30.2
Sopen06g002860 Solanum pennellii HOM05D006778 ORTHO05D008341 5.3e-09 65.5 186 29.6
PGR044G0410 Punica granatum HOM05D006778 ORTHO05D008341 9.0e-09 64.7 192 28.1
TWI14G0487 Tripterygium wilfordii HOM05D006778 ORTHO05D008341 9.0e-09 64.7 203 34.0
SMO111G0074 Selaginella moellendorffii HOM05D006778 ORTHO05D008341 1.2e-08 64.3 192 31.8
Haze_24755 Corylus avellana HOM05D006778 ORTHO05D008341 4.5e-08 62.4 113 37.2
Haze_24757 Corylus avellana HOM05D006778 ORTHO05D008341 4.5e-08 62.4 113 37.2
BcaB02g06889 Brassica carinata HOM05D006778 ORTHO05D008341 1.7e-07 60.5 78 53.8
BcaB05g23407 Brassica carinata HOM05D006778 ORTHO05D008341 1.7e-07 60.5 87 51.7
CDE06G1811 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 1.7e-07 60.5 198 28.3
BcaB07g32727 Brassica carinata HOM05D004750 ORTHO05D006207 2.2e-07 60.1 77 54.5
HPP92_014070 Vanilla planifolia HOM05D006778 ORTHO05D008341 2.9e-07 59.7 186 30.1
VMungo0720G2677 Vigna mungo HOM05D006778 ORTHO05D008341 4.9e-07 58.9 111 36.9
CDE07G0370 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 8.4e-07 58.2 199 30.7
BcaC05g25005 Brassica carinata HOM05D002222 ORTHO05D002354 1.1e-06 57.8 76 53.9
SalBow4G2567 Salvia bowleyana HOM05D006778 ORTHO05D008341 1.4e-06 57.4 51 56.9
MD10G1170500 Malus domestica HOM05D006778 ORTHO05D008341 4.2e-06 55.8 49 57.1
Atru.chr5.1931 Acer truncatum HOM05D006778 ORTHO05D008341 5.5e-06 55.5 108 36.1
Hund05528 Selenicereus undatus HOM05D006778 ORTHO05D008341 7.1e-06 55.1 105 36.2
MBI11_g20194_MAGBIO Magnolia biondii HOM05D006778 ORTHO05D008341 9.3e-06 54.7 55 54.5


User provided reference genes

Program Settings