Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p53310 Brassica napus HOM05D000321 ORTHO05D000204 1.4e-19 98.6 50 100.0
AL7G31570 Arabidopsis lyrata HOM05D000321 ORTHO05D000204 2.7e-10 67.8 45 71.1
Carub.0007s1920 Capsella rubella HOM05D000321 ORTHO05D000204 2.7e-10 67.8 45 71.1
Sp7g20270 Schrenkiella parvula HOM05D000321 ORTHO05D000204 2.7e-10 67.8 45 71.1
Aa31LG9G9860 Aethionema arabicum HOM05D000321 ORTHO05D000204 4.7e-10 67.0 45 68.9
BcaC09g51160 Brassica carinata HOM05D000321 ORTHO05D000204 4.7e-10 67.0 45 71.1
BcaNung03763 Brassica carinata HOM05D000321 ORTHO05D000204 4.7e-10 67.0 45 71.1
A01p13450 Brassica napus HOM05D000321 ORTHO05D000204 4.7e-10 67.0 45 71.1
A08p15590 Brassica napus HOM05D000321 ORTHO05D000204 4.7e-10 67.0 45 71.1
C01p16290 Brassica napus HOM05D000321 ORTHO05D000204 4.7e-10 67.0 45 71.1
C03p84040 Brassica napus HOM05D000321 ORTHO05D000204 4.7e-10 67.0 45 71.1
BolC1t01581H Brassica oleracea HOM05D000321 ORTHO05D000204 4.7e-10 67.0 45 71.1
BolC3t20683H Brassica oleracea HOM05D000321 ORTHO05D000204 4.7e-10 67.0 45 71.1
BraA01t01288Z Brassica rapa HOM05D000321 ORTHO05D000204 4.7e-10 67.0 45 71.1
BraA08t33539Z Brassica rapa HOM05D000321 ORTHO05D000204 4.7e-10 67.0 45 71.1
CARHR228950 Cardamine hirsuta HOM05D000321 ORTHO05D000204 4.7e-10 67.0 45 68.9
Thhalv10024476m.g Eutrema salsugineum HOM05D000321 ORTHO05D000204 4.7e-10 67.0 45 71.1
AT4G22120 Arabidopsis thaliana HOM05D000321 ORTHO05D000204 7.9e-10 66.2 45 68.9
BcaC01g00763 Brassica carinata HOM05D000321 ORTHO05D000204 7.9e-10 66.2 45 71.1
Thhalv10028449m.g Eutrema salsugineum HOM05D000321 ORTHO05D000204 1.8e-09 65.1 45 68.9
Sp6g04510 Schrenkiella parvula HOM05D000321 ORTHO05D000204 6.7e-09 63.2 45 64.4
THA.LOC104813388 Tarenaya hassleriana HOM05D000321 ORTHO05D000204 8.8e-09 62.8 45 60.0
AL6G47880 Arabidopsis lyrata HOM05D000321 ORTHO05D000204 1.1e-08 62.4 45 62.2
BcaB01g02600 Brassica carinata HOM05D000321 ORTHO05D000204 1.5e-08 62.0 45 64.4
A03p29940 Brassica napus HOM05D000321 ORTHO05D000204 1.5e-08 62.0 45 64.4
BolC3t15932H Brassica oleracea HOM05D000321 ORTHO05D000204 1.5e-08 62.0 45 64.4
BraA03t12183Z Brassica rapa HOM05D000321 ORTHO05D000204 1.5e-08 62.0 45 64.4
AT4G04340 Arabidopsis thaliana HOM05D000321 ORTHO05D000204 2.6e-08 61.2 45 62.2
C03p36230 Brassica napus HOM05D000321 ORTHO05D000204 2.6e-08 61.2 45 64.4
Carub.0006s3217 Capsella rubella HOM05D000321 ORTHO05D000204 2.6e-08 61.2 45 62.2
CARHR253100 Cardamine hirsuta HOM05D000321 ORTHO05D000204 3.3e-08 60.8 45 62.2
Aa31LG6G4270 Aethionema arabicum HOM05D000321 ORTHO05D000204 7.4e-08 59.7 45 62.2
FvH4_3g01530 Fragaria vesca HOM05D000321 ORTHO05D000204 9.7e-08 59.3 45 55.6
RcHm_v2.0_Chr5g0002361 Rosa chinensis HOM05D000321 ORTHO05D000204 1.7e-07 58.5 45 53.3
CiPaw.09G097100 Carya illinoinensis HOM05D000321 ORTHO05D000204 2.8e-07 57.8 45 57.8
FAN21G2098 Fragaria x ananassa HOM05D000321 ORTHO05D000204 2.8e-07 57.8 45 53.3
Eucgr.D01358 Eucalyptus grandis HOM05D000321 ORTHO05D000204 4.8e-07 57.0 45 60.0
Manes.16G003300 Manihot esculenta HOM05D000321 ORTHO05D000204 4.8e-07 57.0 45 57.8
CiPaw.10G073900 Carya illinoinensis HOM05D000321 ORTHO05D000204 1.1e-06 55.8 45 60.0
Haze_06848 Corylus avellana HOM05D000321 ORTHO05D000204 1.4e-06 55.5 45 60.0
Duzib160G0759 Durio zibethinus HOM05D000321 ORTHO05D000204 1.4e-06 55.5 45 62.2
Gohir.A05G172700 Gossypium hirsutum HOM05D000321 ORTHO05D000204 1.4e-06 55.5 45 62.2
Gohir.D05G175700 Gossypium hirsutum HOM05D000321 ORTHO05D000204 1.4e-06 55.5 45 62.2
Gorai.009G181100 Gossypium raimondii HOM05D000321 ORTHO05D000204 1.4e-06 55.5 45 62.2
Prupe.4G016200 Prunus persica HOM05D000321 ORTHO05D000204 1.4e-06 55.5 45 60.0
Thecc.06G226800 Theobroma cacao HOM05D000321 ORTHO05D000204 1.4e-06 55.5 45 62.2
Cfa000172 Carpinus fangiana HOM05D000321 ORTHO05D000204 1.8e-06 55.1 45 57.8
Haze_06847 Corylus avellana HOM05D000321 ORTHO05D000204 1.8e-06 55.1 45 57.8
Ciclev10014589m.g Citrus clementina HOM05D000321 ORTHO05D000204 3.1e-06 54.3 45 51.1
QL05p072225 Quercus lobata HOM05D000321 ORTHO05D000204 3.1e-06 54.3 45 53.3
Gohir.D10G011000 Gossypium hirsutum HOM05D000321 ORTHO05D000204 4.1e-06 53.9 45 60.0
Gorai.011G012200 Gossypium raimondii HOM05D000321 ORTHO05D000204 4.1e-06 53.9 45 60.0
PGR004G1678 Punica granatum HOM05D000321 ORTHO05D000204 4.1e-06 53.9 45 48.9
Sp1g10650 Schrenkiella parvula HOM05D000321 ORTHO05D000204 5.3e-06 53.5 45 57.8
Phvul.006G000300 Phaseolus vulgaris HOM05D000321 ORTHO05D000204 7.0e-06 53.1 45 57.8
Potri.004G006100 Populus trichocarpa HOM05D000321 ORTHO05D000204 7.0e-06 53.1 45 55.6
A09p16360 Brassica napus HOM05D000321 ORTHO05D000204 9.1e-06 52.8 45 60.0
BraA09t37276Z Brassica rapa HOM05D000321 ORTHO05D000204 9.1e-06 52.8 45 60.0
TWI63G1522 Tripterygium wilfordii HOM05D000321 ORTHO05D000204 9.1e-06 52.8 45 51.1


User provided reference genes

Program Settings