Gene: Carub.0006s3217
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0006s3217
- Transcript Identifier Carub.0006s3217.1
- Gene Type Coding gene
- Location scaffold_6 : 14578209-14581689 : positive
Gene Family Information
- ID HOM05D000321
- #Genes/#Species 1447/100
- Phylogenetic origin
- ID ORTHO05D000204
- #Genes/#Species 1402/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0006s3217.v1.1
- pacid 39249905
- synonym Carubv10000278m.g
Descriptions
- Description PTHR13018//PTHR13018:SF47 - PROBABLE MEMBRANE PROTEIN DUF221-RELATED // ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0090279 | ISO | PLAZA Integrative Orthology | regulation of calcium ion import | AT4G04340 |
| GO:0051262 | ISO | PLAZA Integrative Orthology | protein tetramerization | AT4G04340 |
| GO:0071474 | ISO | PLAZA Integrative Orthology | cellular hyperosmotic response | AT4G04340 |
| GO:0006970 | ISO | PLAZA Integrative Orthology | response to osmotic stress | AT4G04340 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005227 | IEA | InterPro | calcium activated cation channel activity | |
| GO:0005261 | ISO | PLAZA Integrative Orthology | cation channel activity | AT4G04340 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT4G04340 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027815 | 10TM putative phosphate transporter, cytosolic domain |
| IPR045122 | Calcium permeable stress-gated cation channel 1-like |
| IPR003864 | Calcium-dependent channel, 7TM region, putative phosphate |
| IPR032880 | Calcium permeable stress-gated cation channel 1, N-terminal transmembrane domain |
| Mapman id | Description |
|---|---|
| 24.3.7 | Solute transport.channels.calcium-permeable channel (OSCA) |