Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 7.7e-71 270.4 138 100.0
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 7.7e-71 270.4 138 100.0
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 3.2e-69 265.0 141 97.9
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 2.1e-68 262.3 138 97.1
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 3.0e-67 258.5 141 92.2
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 8.2e-65 250.4 138 92.8
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 3.1e-64 248.4 138 92.0
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 3.1e-64 248.4 138 92.0
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 3.1e-64 248.4 138 92.0
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 3.1e-64 248.4 138 92.0
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 3.1e-64 248.4 138 92.0
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 6.1e-60 234.2 138 83.3
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 1.4e-59 233.0 138 88.4
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 6.3e-57 224.2 150 79.3
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 4.1e-56 221.5 141 80.1
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 4.1e-56 221.5 139 78.4
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 7.0e-56 220.7 138 78.3
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 5.5e-53 211.1 140 75.7
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 1.2e-52 209.9 140 65.0
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 6.1e-52 207.6 157 69.4
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 8.0e-52 207.2 104 82.7
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 6.7e-51 204.1 142 72.5
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 1.1e-50 203.4 138 65.9
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 1.5e-50 203.0 144 68.8
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 2.0e-50 202.6 139 65.5
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 2.6e-50 202.2 143 64.3
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 2.6e-50 202.2 130 66.2
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 2.6e-50 202.2 147 61.2
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 4.4e-50 201.4 104 79.8
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 5.7e-50 201.1 138 63.8
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 5.7e-50 201.1 138 71.0
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 7.4e-50 200.7 138 69.6
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 7.4e-50 200.7 104 77.9
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 9.7e-50 200.3 144 64.6
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 1.3e-49 199.9 138 64.5
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 2.2e-49 199.1 144 61.8
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 2.2e-49 199.1 142 63.4
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 3.7e-49 198.4 104 76.0
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 3.7e-49 198.4 138 61.6
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 3.7e-49 198.4 142 65.5
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 3.7e-49 198.4 142 65.5
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 6.3e-49 197.6 129 63.6
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 6.3e-49 197.6 138 64.5
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 8.2e-49 197.2 144 61.1
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 8.2e-49 197.2 130 65.4
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 8.2e-49 197.2 104 76.0
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 1.8e-48 196.1 137 62.0
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 1.8e-48 196.1 104 77.9
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 1.8e-48 196.1 139 63.3
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 2.4e-48 195.7 104 77.9
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 2.4e-48 195.7 139 61.2
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 2.4e-48 195.7 139 61.2
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 2.4e-48 195.7 139 61.2
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 3.1e-48 195.3 142 60.6
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 1.2e-47 193.4 139 62.6
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 1.6e-47 193.0 140 60.7
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 2.6e-47 192.2 104 73.1
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 4.5e-47 191.4 143 61.5
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 7.7e-47 190.7 104 74.0
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 1.0e-46 190.3 130 63.1
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 1.3e-46 189.9 140 68.6
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 1.3e-46 189.9 143 62.2
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 2.2e-46 189.1 137 62.8
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 2.9e-46 188.7 104 74.0
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 1.9e-45 186.0 104 73.1
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 7.2e-45 184.1 103 70.9
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 9.4e-45 183.7 139 65.5
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 9.4e-45 183.7 135 63.0
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 1.6e-44 183.0 101 70.3
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 2.1e-44 182.6 104 71.2
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 2.7e-44 182.2 143 57.3
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 3.6e-44 181.8 104 70.2
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 4.7e-44 181.4 139 62.6
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 6.1e-44 181.0 144 55.6
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 8.0e-44 180.6 137 58.4
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 1.0e-43 180.3 104 70.2
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 1.5e-42 176.4 142 61.3
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 2.0e-42 176.0 100 75.0
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 2.6e-42 175.6 173 49.1
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 4.4e-42 174.9 139 58.3
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 4.4e-42 174.9 91 78.0
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 4.4e-42 174.9 103 66.0
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 5.7e-42 174.5 100 70.0
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 5.7e-42 174.5 112 65.2
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 7.5e-42 174.1 103 66.0
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 1.1e-40 170.2 105 61.9
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 1.4e-40 169.9 182 46.2
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 1.4e-40 169.9 142 52.8
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 5.4e-40 167.9 125 58.4
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 1.6e-39 166.4 127 57.5
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 2.7e-39 165.6 146 53.4
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 4.5e-39 164.9 116 60.3
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.0e-38 163.7 103 66.0
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 2.2e-38 162.5 124 54.0
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 1.9e-37 159.5 142 53.5
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 3.2e-37 158.7 104 54.8
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 7.2e-37 157.5 104 65.4
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 9.4e-37 157.1 78 82.1
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 1.6e-36 156.4 123 63.4
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 1.6e-36 156.4 143 53.1
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 1.7e-33 146.4 78 73.1
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 2.2e-33 146.0 128 52.3
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 1.4e-32 143.3 115 57.4
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 3.5e-31 138.7 90 68.9
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 4.5e-31 138.3 119 56.3
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 2.3e-30 136.0 149 48.3
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 3.8e-30 135.2 79 69.6
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 1.6e-23 113.2 88 61.4
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 2.0e-23 112.8 100 54.0
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 2.0e-23 112.8 100 54.0
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 2.7e-23 112.5 62 74.2
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 3.5e-23 112.1 94 58.5
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 4.6e-23 111.7 94 57.4
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 1.7e-22 109.8 98 56.1
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 6.6e-22 107.8 93 49.5
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 2.8e-20 102.4 68 63.2
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 3.6e-20 102.1 96 52.1
BolC7t45633H Brassica oleracea HOM05D006296 ORTHO05D007777 3.4e-18 95.5 61 96.7
C07p51340 Brassica napus HOM05D006296 ORTHO05D007777 6.4e-17 91.3 62 88.7
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 7.0e-16 87.8 53 66.0
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 1.3e-14 83.6 59 54.2
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 3.4e-10 68.9 38 76.3


User provided reference genes

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