Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p31860 Brassica napus HOM05D001038 ORTHO05D024045 1.3e-163 579.7 296 100.0
A03p51100 Brassica napus HOM05D001038 ORTHO05D024045 1.3e-163 579.7 296 100.0
BraA06t24545Z Brassica rapa HOM05D001038 ORTHO05D024045 2.9e-128 462.2 270 89.3
C07p11760 Brassica napus HOM05D001038 ORTHO05D024045 1.7e-99 366.7 270 68.9
BcaC06g35713 Brassica carinata HOM05D001038 ORTHO05D024045 3.3e-87 325.9 248 66.5
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 6.1e-49 198.7 225 48.0
BcaB07g32737 Brassica carinata HOM05D001038 ORTHO05D000395 5.3e-45 185.7 261 45.6
BcaC08g44444 Brassica carinata HOM05D001038 ORTHO05D016716 1.2e-25 121.3 146 43.2
BcaC05g28787 Brassica carinata HOM05D001038 ORTHO05D016716 4.7e-25 119.4 210 35.7
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 5.7e-23 112.5 220 35.5
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 7.5e-23 112.1 220 35.5
BcaB01g01825 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-22 110.2 162 40.7
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 1.3e-19 101.3 141 41.1
C06p18900 Brassica napus HOM05D001038 ORTHO05D016716 2.3e-19 100.5 115 46.1
BcaB06g26737 Brassica carinata HOM05D001038 ORTHO05D010763 2.9e-19 100.1 222 32.0
BcaB02g06555 Brassica carinata HOM05D001038 ORTHO05D010763 3.8e-19 99.8 165 42.4
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 3.8e-19 99.8 248 32.3
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 3.8e-19 99.8 248 32.3
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 5.0e-19 99.4 162 40.7
BcaB05g22891 Brassica carinata HOM05D001038 ORTHO05D010763 1.1e-18 98.2 193 35.8
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 1.9e-18 97.4 187 35.3
BcaB05g22095 Brassica carinata HOM05D001038 ORTHO05D016776 2.5e-18 97.1 248 32.3
BcaB08g35144 Brassica carinata HOM05D001038 ORTHO05D021599 2.5e-18 97.1 149 40.3
BcaB04g17690 Brassica carinata HOM05D001038 ORTHO05D018589 3.2e-18 96.7 212 34.9
BcaC08g44142 Brassica carinata HOM05D001038 ORTHO05D000395 3.2e-18 96.7 222 34.7
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 4.2e-18 96.3 157 38.9
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 5.5e-18 95.9 142 41.5
BcaC07g39263 Brassica carinata HOM05D001038 ORTHO05D016776 7.2e-18 95.5 143 42.0
BcaC08g46990 Brassica carinata HOM05D025413 ORTHO05D021599 7.2e-18 95.5 116 48.3
BcaB08g36820 Brassica carinata HOM05D001038 ORTHO05D016703 9.5e-18 95.1 168 36.9
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 3.6e-17 93.2 212 31.6
BcaB07g33632 Brassica carinata HOM05D001038 ORTHO05D016703 6.1e-17 92.4 165 37.6
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 6.1e-17 92.4 189 33.3
BraA10t43660Z Brassica rapa HOM05D025413 ORTHO05D021599 8.0e-17 92.0 140 42.9
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 1.0e-16 91.7 103 45.6
BcaC01g03622 Brassica carinata HOM05D001038 ORTHO05D016776 4.0e-16 89.7 286 30.1
BcaNung01360 Brassica carinata HOM05D001038 ORTHO05D010763 6.8e-16 89.0 146 36.3
BcaC02g08100 Brassica carinata HOM05D001038 ORTHO05D018589 8.8e-16 88.6 238 30.7
C07p11920 Brassica napus HOM05D001038 ORTHO05D031981 1.2e-15 88.2 89 44.9
BolC4t25613H Brassica oleracea HOM05D001038 ORTHO05D016776 2.0e-15 87.4 206 34.0
BcaB07g33328 Brassica carinata HOM05D001038 ORTHO05D010763 3.4e-15 86.7 154 35.7
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 4.4e-15 86.3 218 32.1
BcaB03g16464 Brassica carinata HOM05D001038 ORTHO05D018589 5.7e-15 85.9 144 40.3
BcaB06g25472 Brassica carinata HOM05D001038 ORTHO05D010763 9.8e-15 85.1 149 36.2
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 2.8e-14 83.6 193 32.1
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 1.8e-13 80.9 69 53.6
BcaC03g15830 Brassica carinata HOM05D001038 ORTHO05D016716 2.4e-13 80.5 110 36.4
C04p40350 Brassica napus HOM05D001038 ORTHO05D016776 2.4e-13 80.5 219 30.6
BolC4t26248H Brassica oleracea HOM05D001038 ORTHO05D018589 2.4e-13 80.5 192 32.3
BcaC05g27690 Brassica carinata HOM05D001038 ORTHO05D016716 7.0e-13 79.0 69 53.6
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 2.0e-12 77.4 71 50.7
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 2.7e-12 77.0 137 38.7
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 2.7e-12 77.0 183 33.3
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 2.7e-12 77.0 183 33.3
BcaC06g36746 Brassica carinata HOM05D001038 ORTHO05D010763 7.8e-12 75.5 164 33.5
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 1.0e-11 75.1 82 48.8
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 1.0e-11 75.1 82 48.8
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-11 74.7 134 36.6
BolC4t27749H Brassica oleracea HOM05D001038 ORTHO05D016776 1.3e-11 74.7 85 44.7
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-11 73.9 134 37.3
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 2.9e-11 73.6 209 30.1
BcaB04g19629 Brassica carinata HOM05D001038 ORTHO05D000395 5.0e-11 72.8 134 32.8
BcaC06g35568 Brassica carinata HOM05D001038 ORTHO05D016703 5.0e-11 72.8 111 42.3
BcaB02g10756 Brassica carinata HOM05D000367 ORTHO05D001227 6.6e-11 72.4 180 33.9
BcaB01g01349 Brassica carinata HOM05D001038 ORTHO05D096136 8.6e-11 72.0 99 41.4
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 8.6e-11 72.0 137 35.8
C01p21870 Brassica napus HOM05D001038 ORTHO05D041007 8.6e-11 72.0 137 35.8
BolC1t02113H Brassica oleracea HOM05D001038 ORTHO05D041007 8.6e-11 72.0 137 35.8
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 3.3e-10 70.1 131 34.4
BcaB01g01698 Brassica carinata HOM05D001038 ORTHO05D016716 5.6e-10 69.3 80 45.0
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 7.3e-10 68.9 153 32.0
BraA06t25412Z Brassica rapa HOM05D001038 ORTHO05D017560 7.3e-10 68.9 136 34.6
BcaC06g35698 Brassica carinata HOM05D001038 ORTHO05D031981 9.5e-10 68.6 61 50.8
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 9.5e-10 68.6 96 38.5
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 1.2e-09 68.2 151 33.8
BcaB01g04196 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-09 67.4 216 29.6
C09p42070 Brassica napus HOM05D001038 ORTHO05D021947 2.1e-09 67.4 134 32.8
BcaB06g28161 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-09 67.0 150 32.7
BcaC08g44172 Brassica carinata HOM05D001038 ORTHO05D018589 2.8e-09 67.0 239 26.8
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 3.6e-09 66.6 135 34.1
BcaB04g17277 Brassica carinata HOM05D001038 ORTHO05D014932 4.7e-09 66.2 192 30.7
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 4.7e-09 66.2 134 32.8
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 6.1e-09 65.9 155 35.5
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 6.1e-09 65.9 132 29.5
BraA06t25336Z Brassica rapa HOM05D001038 ORTHO05D028293 6.1e-09 65.9 137 33.6
BcaC05g26744 Brassica carinata HOM05D001038 ORTHO05D000395 8.0e-09 65.5 150 32.0
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-08 65.1 135 31.1
BcaB06g28131 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-08 65.1 137 31.4
BolC7t41626H Brassica oleracea HOM05D001038 ORTHO05D014932 1.4e-08 64.7 155 34.8
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-08 64.3 130 31.5
C08p04910 Brassica napus HOM05D025413 ORTHO05D021599 1.8e-08 64.3 107 40.2
BolC8t47294H Brassica oleracea HOM05D025413 ORTHO05D021599 1.8e-08 64.3 107 40.2
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-08 63.9 241 23.7
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-08 63.9 183 28.4
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 2.3e-08 63.9 253 29.2
C06p10570 Brassica napus HOM05D001038 ORTHO05D014932 2.3e-08 63.9 155 34.2
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 2.3e-08 63.9 183 28.4
BolC2t11143H Brassica oleracea HOM05D001038 ORTHO05D024385 3.0e-08 63.5 161 29.8
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 5.2e-08 62.8 134 33.6
BcaB08g36369 Brassica carinata HOM05D001038 ORTHO05D014932 5.2e-08 62.8 191 27.7
BcaC05g24336 Brassica carinata HOM05D001038 ORTHO05D016776 6.8e-08 62.4 57 52.6
A06p10190 Brassica napus HOM05D001038 ORTHO05D014932 6.8e-08 62.4 187 28.3
BcaB03g16061 Brassica carinata HOM05D001038 ORTHO05D000395 8.9e-08 62.0 102 37.3
BcaNung04782 Brassica carinata HOM05D001038 ORTHO05D014932 8.9e-08 62.0 148 33.8
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 8.9e-08 62.0 136 34.6
BraA01t02230Z Brassica rapa HOM05D001038 ORTHO05D000395 8.9e-08 62.0 136 34.6
BraA07t28076Z Brassica rapa HOM05D001038 ORTHO05D028293 8.9e-08 62.0 135 34.8
A07p02760 Brassica napus HOM05D005627 ORTHO05D028293 1.2e-07 61.6 158 34.2
C05p37200 Brassica napus HOM05D001038 ORTHO05D017560 1.2e-07 61.6 136 33.8
BcaB01g01601 Brassica carinata HOM05D001038 ORTHO05D090378 1.5e-07 61.2 175 26.3
BcaC04g22987 Brassica carinata HOM05D062974 ORTHO05D000395 1.5e-07 61.2 134 31.3
BcaC06g35484 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-07 60.8 258 29.5
C04p40300 Brassica napus HOM05D003139 ORTHO05D003540 2.0e-07 60.8 263 24.7
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 2.0e-07 60.8 141 30.5
BraA04t17267Z Brassica rapa HOM05D001038 ORTHO05D014932 2.0e-07 60.8 187 28.3
BcaB05g23462 Brassica carinata HOM05D001038 ORTHO05D091267 3.4e-07 60.1 57 50.9
BcaB08g34782 Brassica carinata HOM05D001038 ORTHO05D000395 3.4e-07 60.1 138 34.1
BcaC07g37120 Brassica carinata HOM05D025413 ORTHO05D021599 3.4e-07 60.1 145 33.8
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 5.7e-07 59.3 134 30.6
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 5.7e-07 59.3 113 35.4
BcaB01g01303 Brassica carinata HOM05D001038 ORTHO05D000395 9.8e-07 58.5 183 29.5
BcaC02g09232 Brassica carinata HOM05D003139 ORTHO05D003540 1.7e-06 57.8 162 30.2
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 1.7e-06 57.8 157 28.0
BcaB02g10814 Brassica carinata HOM05D001038 ORTHO05D010946 2.2e-06 57.4 193 31.1
BcaC06g36128 Brassica carinata HOM05D007774 ORTHO05D000395 2.2e-06 57.4 112 35.7
BcaB08g35416 Brassica carinata HOM05D001038 ORTHO05D017560 3.7e-06 56.6 134 28.4
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 8.3e-06 55.5 134 29.1
C02p24050 Brassica napus HOM05D001038 ORTHO05D000395 8.3e-06 55.5 105 39.0


User provided reference genes

Program Settings