Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 1.6e-169 599.4 306 100.0
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 4.6e-169 597.8 306 99.7
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 4.8e-166 587.8 306 98.0
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 4.8e-166 587.8 306 98.0
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 1.6e-161 572.8 306 95.4
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 1.7e-155 552.7 304 91.8
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 1.9e-154 549.3 302 92.4
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 7.2e-154 547.4 302 91.7
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 7.2e-154 547.4 302 91.7
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 1.2e-153 546.6 306 93.1
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 4.7e-153 544.7 303 92.1
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 3.9e-152 541.6 303 91.7
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 7.4e-151 537.3 303 89.8
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 2.8e-142 508.8 304 84.5
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 9.1e-141 503.8 303 83.5
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 1.2e-140 503.4 304 83.6
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 1.0e-139 500.4 305 84.3
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 2.5e-130 469.2 308 80.8
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 1.2e-127 460.3 292 80.1
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 1.4e-120 436.8 310 72.6
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 3.4e-111 405.6 312 68.9
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 1.4e-109 400.2 313 67.7
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 1.1e-106 390.6 310 67.7
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 1.1e-106 390.6 299 69.6
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 2.5e-106 389.4 302 68.9
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 3.3e-106 389.0 311 66.9
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 3.6e-105 385.6 286 70.6
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 6.2e-105 384.8 310 67.1
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 6.2e-105 384.8 302 68.2
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 6.2e-105 384.8 302 66.9
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 1.8e-104 383.3 311 66.9
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 2.3e-104 382.9 302 67.5
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 2.3e-104 382.9 249 76.3
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 3.1e-104 382.5 245 76.7
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 3.1e-104 382.5 249 76.3
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 3.1e-104 382.5 310 65.8
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 4.0e-104 382.1 301 64.8
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 5.2e-104 381.7 305 68.2
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 6.8e-104 381.3 314 65.3
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 1.2e-103 380.6 271 71.2
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 1.5e-103 380.2 305 67.2
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 1.5e-103 380.2 311 66.2
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 2.0e-103 379.8 302 66.6
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 3.4e-103 379.0 302 66.6
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 3.4e-103 379.0 292 67.5
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 5.8e-103 378.3 263 72.2
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 7.5e-103 377.9 309 66.7
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 7.5e-103 377.9 276 69.2
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 1.7e-102 376.7 304 64.5
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 2.9e-102 375.9 289 68.9
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 3.7e-102 375.6 319 63.6
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 3.7e-102 375.6 307 67.8
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 6.4e-102 374.8 304 64.1
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 1.9e-101 373.2 316 63.6
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 2.4e-101 372.9 316 64.9
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 2.4e-101 372.9 299 67.6
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 2.4e-101 372.9 295 67.8
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 3.2e-101 372.5 242 75.2
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 3.2e-101 372.5 304 64.1
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 4.1e-101 372.1 304 65.8
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 4.1e-101 372.1 307 65.8
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 5.4e-101 371.7 311 65.6
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 5.4e-101 371.7 312 64.7
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 5.4e-101 371.7 295 65.1
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 7.1e-101 371.3 288 68.4
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 1.6e-100 370.2 270 71.5
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 2.1e-100 369.8 287 68.6
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 4.6e-100 368.6 250 74.8
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 1.3e-99 367.1 350 57.1
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 1.7e-99 366.7 296 65.5
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 1.7e-99 366.7 311 64.3
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 2.3e-99 366.3 304 64.1
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 6.6e-99 364.8 242 75.6
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 5.6e-98 361.7 307 64.2
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 2.1e-97 359.8 252 71.8
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 3.6e-97 359.0 244 73.4
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 4.7e-97 358.6 307 63.8
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 8.1e-97 357.8 294 63.9
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 4.0e-96 355.5 305 63.9
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 5.2e-96 355.1 275 66.2
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 2.0e-95 353.2 246 72.0
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 2.0e-95 353.2 269 68.0
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 2.6e-95 352.8 299 62.9
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 3.4e-95 352.4 250 71.2
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 9.9e-95 350.9 296 63.2
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 1.7e-94 350.1 248 70.6
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 2.2e-94 349.7 244 70.5
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 2.4e-93 346.3 223 77.6
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 6.0e-92 341.7 293 61.4
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 2.3e-91 339.7 262 64.1
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 1.5e-90 337.0 240 71.7
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 2.5e-90 336.3 219 76.7
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 5.3e-88 328.6 242 68.6
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 9.9e-87 324.3 263 66.5
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 2.9e-86 322.8 228 72.4
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 2.9e-86 322.8 220 75.0
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 3.9e-83 312.4 248 67.3
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 1.3e-81 307.4 255 61.6
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 1.6e-81 307.0 253 67.2
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 6.2e-81 305.1 254 66.9
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 1.8e-80 303.5 316 57.0
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 2.4e-80 303.1 257 65.0
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 9.9e-79 297.7 246 61.8
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 1.7e-78 297.0 249 64.3
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 4.2e-77 292.4 213 69.5
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 4.6e-76 288.9 245 66.5
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 1.4e-72 277.3 240 59.2
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 1.2e-68 264.2 221 64.7
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 2.1e-68 263.5 191 71.7
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 2.4e-64 250.0 309 50.2
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 5.5e-61 238.8 182 68.1
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 9.3e-61 238.0 245 54.7
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 9.0e-56 221.5 293 45.7
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 3.4e-47 193.0 129 73.6
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 1.0e-43 181.4 117 72.6
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 1.2e-36 157.9 115 67.0
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 5.3e-32 142.5 112 62.5
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 1.1e-29 134.8 95 65.3
Hma1.2p1_0161F.1_g071660 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 5.7e-26 122.5 90 70.0
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 7.7e-23 112.1 85 65.9
CDE04G0367 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 2.9e-22 110.2 92 63.0
BcaB06g26875 Brassica carinata HOM05D006330 ORTHO05D008013 1.1e-21 108.2 64 90.6
VMungo1383G2211 Vigna mungo HOM05D006330 ORTHO05D434633 2.6e-10 70.5 48 70.8
RcHm_v2.0_Chr5g0065021 Rosa chinensis HOM05D006330 ORTHO05D008013 1.0e-06 58.5 46 63.0


User provided reference genes

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