Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p40100 Brassica napus HOM05D002658 ORTHO05D014763 6.4e-158 560.8 285 100.0
Sp3g15360 Schrenkiella parvula HOM05D009524 ORTHO05D014763 9.3e-24 115.2 94 68.1
Lalb_Chr03g0024791 Lupinus albus HOM05D002658 ORTHO05D003000 2.6e-10 70.5 80 38.8
Lalb_Chr19g0139381 Lupinus albus HOM05D002658 ORTHO05D003000 1.0e-09 68.6 80 40.0
BcaB06g25912 Brassica carinata HOM05D002658 ORTHO05D003000 2.2e-09 67.4 79 39.2
Thhalv10020940m.g Eutrema salsugineum HOM05D002658 ORTHO05D003000 5.0e-09 66.2 80 40.0
THA.LOC104820414 Tarenaya hassleriana HOM05D002658 ORTHO05D003000 5.0e-09 66.2 80 38.8
BcaC05g27545 Brassica carinata HOM05D002658 ORTHO05D003000 6.5e-09 65.9 79 39.2
C05p35300 Brassica napus HOM05D002658 ORTHO05D003000 6.5e-09 65.9 79 39.2
Potri.007G071100 Populus trichocarpa HOM05D002658 ORTHO05D003000 6.5e-09 65.9 105 34.3
Ah.01g012180 Amaranthus hybridus HOM05D002658 ORTHO05D003000 8.5e-09 65.5 116 31.9
BolC5t32244H Brassica oleracea HOM05D002658 ORTHO05D003000 8.5e-09 65.5 79 39.2
Carub.0001s3809 Capsella rubella HOM05D002658 ORTHO05D003000 8.5e-09 65.5 79 38.0
Lsat_1_v5_gn_3_35601 Lactuca sativa HOM05D002658 ORTHO05D003000 8.5e-09 65.5 80 38.8
Sabra07G0059800 Salix brachista HOM05D002658 ORTHO05D003000 1.1e-08 65.1 78 41.0
EL10Ac9g22941 Beta vulgaris HOM05D002658 ORTHO05D003000 1.4e-08 64.7 114 33.3
Lalb_Chr01g0001461 Lupinus albus HOM05D002658 ORTHO05D003000 1.9e-08 64.3 80 37.5
AL1G55750 Arabidopsis lyrata HOM05D002658 ORTHO05D003000 2.5e-08 63.9 79 38.0
SalBow2G3648 Salvia bowleyana HOM05D002658 ORTHO05D003000 2.5e-08 63.9 100 35.0
Aa31LG10G5000 Aethionema arabicum HOM05D002658 ORTHO05D003000 3.2e-08 63.5 81 40.7
Carub.0003s1839 Capsella rubella HOM05D002658 ORTHO05D003000 3.2e-08 63.5 115 35.7
Lj3g0010214 Lotus japonicus HOM05D002658 ORTHO05D003000 3.2e-08 63.5 87 35.6
Psat7g173280 Pisum sativum HOM05D002658 ORTHO05D003000 3.2e-08 63.5 80 37.5
Peaxi162Scf00363g00520 Petunia axillaris HOM05D002658 ORTHO05D003000 4.2e-08 63.2 78 37.2
THA.LOC104810678 Tarenaya hassleriana HOM05D002658 ORTHO05D003000 4.2e-08 63.2 78 37.2
A05p20830 Brassica napus HOM05D002658 ORTHO05D003000 5.5e-08 62.8 107 32.7
BraA05t20989Z Brassica rapa HOM05D002658 ORTHO05D003000 5.5e-08 62.8 107 32.7
ClCG10G011940 Citrullus lanatus HOM05D002658 ORTHO05D003000 5.5e-08 62.8 80 33.8
Sp1g35830 Schrenkiella parvula HOM05D002658 ORTHO05D003000 5.5e-08 62.8 79 38.0
BcaB02g11292 Brassica carinata HOM05D002658 ORTHO05D003000 7.2e-08 62.4 79 39.2
Duzib052G0136 Durio zibethinus HOM05D002658 ORTHO05D003000 7.2e-08 62.4 114 28.9
Sed0002082 Sechium edule HOM05D002658 ORTHO05D003000 7.2e-08 62.4 154 30.5
Ca_19028_v3 Cicer arietinum L. HOM05D002658 ORTHO05D003000 9.4e-08 62.0 80 36.2
CsaV3_3G031420 Cucumis sativus L. HOM05D002658 ORTHO05D003000 9.4e-08 62.0 80 33.8
Prupe.1G346800 Prunus persica HOM05D002658 ORTHO05D003000 9.4e-08 62.0 85 37.6
Sed0005223 Sechium edule HOM05D002658 ORTHO05D003000 9.4e-08 62.0 80 36.2
AL3G31920 Arabidopsis lyrata HOM05D002658 ORTHO05D003000 1.2e-07 61.6 78 38.5
AT1G48920 Arabidopsis thaliana HOM05D002658 ORTHO05D003000 1.2e-07 61.6 79 38.0
AT3G18610 Arabidopsis thaliana HOM05D002658 ORTHO05D003000 1.2e-07 61.6 118 33.1
Sp1g34900 Schrenkiella parvula HOM05D009524 ORTHO05D014763 1.2e-07 61.6 72 61.1
Actinidia04307 Actinidia chinensis HOM05D002658 ORTHO05D003000 1.6e-07 61.2 124 28.2
ECA246G1081 Erigeron canadensis HOM05D002658 ORTHO05D003000 1.6e-07 61.2 89 37.1
Lsat_1_v5_gn_4_65420 Lactuca sativa HOM05D002658 ORTHO05D003000 1.6e-07 61.2 80 36.2
MBI02_g07021_MAGBIO Magnolia biondii HOM05D002658 ORTHO05D003000 1.6e-07 61.2 80 33.8
Os08g0192900 Oryza sativa ssp. japonica HOM05D002658 ORTHO05D003000 1.6e-07 61.2 79 35.4
Thhalv10011361m.g Eutrema salsugineum HOM05D002658 ORTHO05D003000 2.1e-07 60.8 115 33.0
VMungo1127G1795 Vigna mungo HOM05D002658 ORTHO05D003000 2.1e-07 60.8 80 35.0
BolC5t33429H Brassica oleracea HOM05D002658 ORTHO05D003000 2.7e-07 60.5 80 36.2
BraA05t21943Z Brassica rapa HOM05D002658 ORTHO05D003000 2.7e-07 60.5 79 34.2
CiPaw.06G060000 Carya illinoinensis HOM05D002658 ORTHO05D003000 2.7e-07 60.5 80 33.8
Medtr4g074930 Medicago truncatula HOM05D002658 ORTHO05D003000 2.7e-07 60.5 86 33.7
Dinv17606 Davidia involucrata HOM05D002658 ORTHO05D003000 3.6e-07 60.1 87 32.2
HanXRQChr17g0544851 Helianthus annuus HOM05D002658 ORTHO05D003000 3.6e-07 60.1 80 35.0
Peaxi162Scf01412g00004 Petunia axillaris HOM05D002658 ORTHO05D003000 3.6e-07 60.1 78 37.2
Thecc.02G160500 Theobroma cacao HOM05D002658 ORTHO05D003000 3.6e-07 60.1 80 33.8
CDE05G1740 Ceratophyllum demersum HOM05D002658 ORTHO05D003000 4.7e-07 59.7 150 26.7
HanXRQChr01g0028031 Helianthus annuus HOM05D002658 ORTHO05D003000 4.7e-07 59.7 121 31.4
Manes.04G053300 Manihot esculenta HOM05D002658 ORTHO05D003000 4.7e-07 59.7 78 34.6
Manes.04G057000 Manihot esculenta HOM05D002658 ORTHO05D003000 4.7e-07 59.7 78 34.6
BcaB07g33701 Brassica carinata HOM05D002658 ORTHO05D003000 6.1e-07 59.3 80 35.0
arahy.Tifrunner.gnm1.ann1.L3BXHZ Arachis hypogaea HOM05D002658 ORTHO05D003000 7.9e-07 58.9 80 35.0
A05p31010 Brassica napus HOM05D002658 ORTHO05D003000 7.9e-07 58.9 79 34.2
Duzib132G0973 Durio zibethinus HOM05D002658 ORTHO05D003000 7.9e-07 58.9 112 27.7
BcaB04g17378 Brassica carinata HOM05D002658 ORTHO05D003000 1.0e-06 58.5 79 38.0
BcaC05g28596 Brassica carinata HOM05D002658 ORTHO05D003000 1.0e-06 58.5 80 36.2
C05p47000 Brassica napus HOM05D000032 ORTHO05D003522 1.0e-06 58.5 80 36.2
C08p04580 Brassica napus HOM05D002658 ORTHO05D003000 1.0e-06 58.5 79 36.7
BolC8t47262H Brassica oleracea HOM05D002658 ORTHO05D003000 1.0e-06 58.5 79 36.7
CARHR038910 Cardamine hirsuta HOM05D002658 ORTHO05D003000 1.0e-06 58.5 78 35.9
Duzib248G1296 Durio zibethinus HOM05D002658 ORTHO05D003000 1.0e-06 58.5 112 26.8
FAN04G0065 Fragaria x ananassa HOM05D002658 ORTHO05D003000 1.0e-06 58.5 88 35.2
Gohir.A01G012800 Gossypium hirsutum HOM05D002658 ORTHO05D003000 1.0e-06 58.5 80 32.5
Nn3g18649 Nelumbo nucifera HOM05D002658 ORTHO05D003000 1.0e-06 58.5 85 34.1
Sabra05G0077200 Salix brachista HOM05D002658 ORTHO05D003000 1.0e-06 58.5 78 37.2
CDE02G0625 Ceratophyllum demersum HOM05D002658 ORTHO05D003000 1.4e-06 58.2 149 26.2
Gohir.D01G014000 Gossypium hirsutum HOM05D002658 ORTHO05D003000 1.4e-06 58.2 113 27.4
Lj1g0013048 Lotus japonicus HOM05D002658 ORTHO05D003000 1.4e-06 58.2 75 33.3
Psat2g041400 Pisum sativum HOM05D002658 ORTHO05D003000 1.4e-06 58.2 131 29.8
QL03p044151 Quercus lobata HOM05D002658 ORTHO05D003000 1.4e-06 58.2 78 33.3
MSTRG.432 Avicennia marina HOM05D002658 ORTHO05D003000 1.8e-06 57.8 81 37.0
BcaC08g43092 Brassica carinata HOM05D002658 ORTHO05D003000 1.8e-06 57.8 79 35.4
TAR629G2145 Trochodendron aralioides HOM05D002658 ORTHO05D003000 1.8e-06 57.8 80 32.5
TAR629G3397 Trochodendron aralioides HOM05D002658 ORTHO05D003000 1.8e-06 57.8 80 32.5
Gohir.D13G061900 Gossypium hirsutum HOM05D002658 ORTHO05D003000 2.3e-06 57.4 112 27.7
Gorai.002G015800 Gossypium raimondii HOM05D002658 ORTHO05D003000 2.3e-06 57.4 80 31.2
PSO063G2038 Papaver somniferum HOM05D002658 ORTHO05D003000 2.3e-06 57.4 89 30.3
PSO782G1034 Papaver somniferum HOM05D002658 ORTHO05D003000 2.3e-06 57.4 89 30.3
A06p04110 Brassica napus HOM05D002658 ORTHO05D003000 3.0e-06 57.0 79 35.4
BraA06t23617Z Brassica rapa HOM05D002658 ORTHO05D003000 3.0e-06 57.0 79 35.4
Gorai.008G149100 Gossypium raimondii HOM05D002658 ORTHO05D003000 3.0e-06 57.0 112 25.0
Lj6C719G16 Lonicera japonica HOM05D002658 ORTHO05D003000 3.0e-06 57.0 87 32.2
A06p04130 Brassica napus HOM05D000335 ORTHO05D003000 3.9e-06 56.6 79 35.4
FAN12G1156 Fragaria x ananassa HOM05D002658 ORTHO05D003000 3.9e-06 56.6 127 27.6
Potri.005G093100 Populus trichocarpa HOM05D002658 ORTHO05D003000 3.9e-06 56.6 78 37.2
Hund08548 Selenicereus undatus HOM05D000185 ORTHO05D000105 3.9e-06 56.6 81 34.6
Thhalv10027521m.g Eutrema salsugineum HOM05D002658 ORTHO05D003000 5.1e-06 56.2 107 34.6
FAN17G0854 Fragaria x ananassa HOM05D002658 ORTHO05D003000 5.1e-06 56.2 83 31.3
Gorai.013G070400 Gossypium raimondii HOM05D002658 ORTHO05D003000 5.1e-06 56.2 112 27.7
Aqoxy3G04264 Aquilegia oxysepala HOM05D002658 ORTHO05D003000 6.7e-06 55.8 87 31.0
CANSAT56G3384 Cannabis sativa HOM05D002658 ORTHO05D003000 6.7e-06 55.8 94 29.8
ECA234G2787 Erigeron canadensis HOM05D002658 ORTHO05D003000 6.7e-06 55.8 78 33.3
BraA08t32458Z Brassica rapa HOM05D002658 ORTHO05D003000 8.8e-06 55.5 79 35.4
Gohir.A13G060000 Gossypium hirsutum HOM05D002658 ORTHO05D003000 8.8e-06 55.5 112 26.8
HPP92_026528 Vanilla planifolia HOM05D002658 ORTHO05D003000 8.8e-06 55.5 116 31.0
HPP92_026555 Vanilla planifolia HOM05D002658 ORTHO05D003000 8.8e-06 55.5 116 31.0


User provided reference genes

Program Settings