Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p30780 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-37 159.1 81 100.0
BraA03t12256Z Brassica rapa HOM05D001038 ORTHO05D000395 4.2e-37 157.5 81 98.8
BolC4t26208H Brassica oleracea HOM05D001038 ORTHO05D000395 2.6e-34 148.3 81 93.8
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 9.2e-24 113.2 81 69.1
BcaB01g00119 Brassica carinata HOM05D001038 ORTHO05D000395 6.6e-22 107.1 81 67.9
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-21 105.9 81 69.1
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 1.6e-20 102.4 81 63.0
BcaB08g35415 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-19 98.6 80 60.0
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 4.0e-19 97.8 81 61.7
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 6.8e-19 97.1 81 61.7
BraSC36t46105Z Brassica rapa HOM05D001038 ORTHO05D000395 6.8e-19 97.1 68 72.1
BcaC06g34271 Brassica carinata HOM05D001038 ORTHO05D000395 8.9e-19 96.7 81 60.5
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-18 96.3 81 60.5
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-18 95.9 67 67.2
BraA06t25413Z Brassica rapa HOM05D001038 ORTHO05D000395 1.5e-18 95.9 63 73.0
C09p50150 Brassica napus HOM05D001038 ORTHO05D000395 3.4e-18 94.7 61 75.4
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 4.4e-18 94.4 81 59.3
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 4.4e-18 94.4 81 58.0
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 4.4e-18 94.4 81 58.0
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 5.8e-18 94.0 81 58.0
C03p74230 Brassica napus HOM05D001038 ORTHO05D000395 5.8e-18 94.0 81 56.8
BraA05t20013Z Brassica rapa HOM05D001038 ORTHO05D000395 7.5e-18 93.6 81 56.8
BcaC04g23074 Brassica carinata HOM05D001038 ORTHO05D019962 9.8e-18 93.2 79 58.2
BcaC01g03478 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-17 92.8 68 72.1
C03p52030 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-17 92.8 68 72.1
BolC3t17485H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-17 92.8 68 72.1
BolC3t19681H Brassica oleracea HOM05D001038 ORTHO05D000395 1.7e-17 92.4 81 55.6
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-17 92.0 68 64.7
BcaC04g19884 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-17 92.0 61 73.8
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 2.2e-17 92.0 81 58.0
BNapus_Darmor_BZH_scaffold_104p00080 Brassica napus HOM05D001038 ORTHO05D000395 2.2e-17 92.0 68 69.1
BraA09t36747Z Brassica rapa HOM05D001038 ORTHO05D000395 3.7e-17 91.3 79 58.2
BcaB07g31487 Brassica carinata HOM05D001038 ORTHO05D000395 4.9e-17 90.9 68 67.6
BcaB08g36368 Brassica carinata HOM05D001038 ORTHO05D000395 4.9e-17 90.9 81 58.0
BcaC03g15415 Brassica carinata HOM05D001038 ORTHO05D000395 4.9e-17 90.9 81 60.5
BcaB01g01124 Brassica carinata HOM05D001038 ORTHO05D000395 6.4e-17 90.5 81 59.3
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 6.4e-17 90.5 81 56.8
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 6.4e-17 90.5 68 67.6
BraA07t28816Z Brassica rapa HOM05D001038 ORTHO05D000395 6.4e-17 90.5 81 56.8
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 8.3e-17 90.1 78 62.8
BcaB05g23513 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-16 89.7 64 67.2
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-16 89.7 81 56.8
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-16 89.7 81 56.8
BraA04t16796Z Brassica rapa HOM05D001038 ORTHO05D000395 1.4e-16 89.4 81 55.6
BcaB04g19295 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-16 89.0 68 64.7
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-16 89.0 81 56.8
C04p46240 Brassica napus HOM05D001038 ORTHO05D000395 1.9e-16 89.0 46 95.7
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 3.2e-16 88.2 81 56.8
BcaC05g27733 Brassica carinata HOM05D001038 ORTHO05D000395 7.0e-16 87.0 80 56.2
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 9.2e-16 86.7 81 55.6
C05p37210 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-15 86.3 58 74.1
A02p12570 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-15 85.9 75 56.0
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 1.6e-15 85.9 81 54.3
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 1.6e-15 85.9 81 55.6
BcaC01g02304 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-15 85.5 63 68.3
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 2.0e-15 85.5 61 68.9
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-15 85.5 61 68.9
A04p08060 Brassica napus HOM05D001038 ORTHO05D000395 2.0e-15 85.5 75 58.7
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 2.0e-15 85.5 65 63.1
C03p66800 Brassica napus HOM05D001038 ORTHO05D000395 2.0e-15 85.5 63 68.3
C09p39690 Brassica napus HOM05D001038 ORTHO05D000395 2.0e-15 85.5 61 68.9
BolC9t56849H Brassica oleracea HOM05D001038 ORTHO05D000395 2.0e-15 85.5 61 68.9
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 2.0e-15 85.5 65 63.1
C02p45440 Brassica napus HOM05D001038 ORTHO05D000395 3.5e-15 84.7 63 65.1
BcaB02g07256 Brassica carinata HOM05D001038 ORTHO05D024222 1.0e-14 83.2 74 58.1
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-14 83.2 81 54.3
BraA08t34502Z Brassica rapa HOM05D001038 ORTHO05D000395 1.0e-14 83.2 69 60.9
BcaC09g50083 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-14 82.4 80 52.5
BolC7t40990H Brassica oleracea HOM05D001957 ORTHO05D002015 2.3e-14 82.0 75 56.0
BcaC08g43120 Brassica carinata HOM05D001038 ORTHO05D032078 3.9e-14 81.3 62 62.9
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 6.6e-14 80.5 71 59.2
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 8.6e-14 80.1 60 63.3
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 8.6e-14 80.1 77 54.5
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 8.6e-14 80.1 71 59.2
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 8.6e-14 80.1 60 63.3
C01p43390 Brassica napus HOM05D001038 ORTHO05D024222 1.1e-13 79.7 54 72.2
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-13 79.3 78 51.3
BolC5t30492H Brassica oleracea HOM05D001038 ORTHO05D000395 3.3e-13 78.2 79 53.2
BraA05t20300Z Brassica rapa HOM05D001038 ORTHO05D000395 3.3e-13 78.2 57 66.7
C09p45390 Brassica napus HOM05D001038 ORTHO05D024072 7.3e-13 77.0 68 60.3
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 1.2e-12 76.3 63 58.7
C07p18280 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-12 76.3 84 48.8
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 1.2e-12 76.3 63 58.7
BraA03t13820Z Brassica rapa HOM05D001038 ORTHO05D000395 1.2e-12 76.3 66 54.5
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-12 75.9 57 64.9
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 1.6e-12 75.9 71 56.3
BraA05t21246Z Brassica rapa HOM05D001038 ORTHO05D000395 1.6e-12 75.9 62 61.3
C07p12210 Brassica napus HOM05D001038 ORTHO05D040877 2.8e-12 75.1 84 48.8
BraA04t18197Z Brassica rapa HOM05D001038 ORTHO05D000395 2.8e-12 75.1 74 51.4
BolC7t42338H Brassica oleracea HOM05D001038 ORTHO05D000395 3.6e-12 74.7 84 47.6
BolC7t41409H Brassica oleracea HOM05D001038 ORTHO05D000395 4.7e-12 74.3 84 48.8
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 4.7e-12 74.3 84 48.8
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 4.7e-12 74.3 63 57.1
C05p36690 Brassica napus HOM05D001038 ORTHO05D000395 6.2e-12 73.9 73 53.4
BraA06t25409Z Brassica rapa HOM05D001038 ORTHO05D000395 8.1e-12 73.6 84 47.6
BraA06t25652Z Brassica rapa HOM05D001038 ORTHO05D000395 8.1e-12 73.6 73 52.1
BcaB01g01350 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-11 72.8 66 56.1
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-11 72.8 63 57.1
BolC2t11144H Brassica oleracea HOM05D001038 ORTHO05D040877 3.1e-11 71.6 84 48.8
BraA02t08904Z Brassica rapa HOM05D001038 ORTHO05D000395 3.1e-11 71.6 72 50.0
BolC7t43509H Brassica oleracea HOM05D001038 ORTHO05D000395 5.2e-11 70.9 61 59.0
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 6.8e-11 70.5 73 47.9
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 8.9e-11 70.1 70 54.3
A06p26760 Brassica napus HOM05D001038 ORTHO05D000395 8.9e-11 70.1 63 54.0
BraA06t25335Z Brassica rapa HOM05D001038 ORTHO05D000395 8.9e-11 70.1 73 50.7
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 8.9e-11 70.1 70 54.3
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-10 68.9 58 58.6
BolC7t41881H Brassica oleracea HOM05D001038 ORTHO05D000395 2.0e-10 68.9 61 57.4
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 2.6e-10 68.6 61 50.8
BraA06t24005Z Brassica rapa HOM05D001038 ORTHO05D000395 3.4e-10 68.2 57 57.9
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 4.4e-10 67.8 61 55.7
BolC4t27362H Brassica oleracea HOM05D001038 ORTHO05D000395 4.4e-10 67.8 61 57.4
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 4.4e-10 67.8 61 55.7
A06p16020 Brassica napus HOM05D001038 ORTHO05D024222 9.9e-10 66.6 46 71.7
A06p28660 Brassica napus HOM05D001038 ORTHO05D000395 9.9e-10 66.6 73 46.6
A06p36110 Brassica napus HOM05D001038 ORTHO05D024222 9.9e-10 66.6 46 71.7
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 9.9e-10 66.6 73 45.2
BraA06t25806Z Brassica rapa HOM05D001038 ORTHO05D000395 9.9e-10 66.6 73 46.6
BolC7t41648H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-09 66.2 86 41.9
BolC6t36762H Brassica oleracea HOM05D001038 ORTHO05D000395 1.7e-09 65.9 61 55.7
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 1.7e-09 65.9 61 49.2
BcaC07g37226 Brassica carinata HOM05D000048 ORTHO05D002390 2.9e-09 65.1 68 42.6
C03p47220 Brassica napus HOM05D001038 ORTHO05D000395 2.9e-09 65.1 59 55.9
BolC2t07185H Brassica oleracea HOM05D001038 ORTHO05D000395 2.9e-09 65.1 57 57.9
BcaB07g32736 Brassica carinata HOM05D001038 ORTHO05D024484 3.7e-09 64.7 61 57.4
C07p11750 Brassica napus HOM05D001038 ORTHO05D000395 3.7e-09 64.7 86 41.9
BolC3t16999H Brassica oleracea HOM05D001038 ORTHO05D018639 3.7e-09 64.7 61 52.5
BcaC06g35714 Brassica carinata HOM05D001038 ORTHO05D000395 6.4e-09 63.9 85 42.4
BolC8t47295H Brassica oleracea HOM05D001038 ORTHO05D000395 6.4e-09 63.9 57 57.9
BolC8t49550H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-08 63.2 57 57.9
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 1.9e-08 62.4 69 44.9
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 1.9e-08 62.4 69 44.9
BcaB06g28671 Brassica carinata HOM05D001038 ORTHO05D018639 2.4e-08 62.0 72 45.8
BolC3t15766H Brassica oleracea HOM05D001038 ORTHO05D040320 2.4e-08 62.0 70 48.6
BcaB06g28542 Brassica carinata HOM05D001038 ORTHO05D000395 5.4e-08 60.8 64 45.3
BcaC01g04980 Brassica carinata HOM05D001038 ORTHO05D000395 5.4e-08 60.8 64 43.8
C08p27920 Brassica napus HOM05D001038 ORTHO05D018639 5.4e-08 60.8 71 43.7
BolC4t24024H Brassica oleracea HOM05D001038 ORTHO05D000395 5.4e-08 60.8 67 52.2
BraA02t08028Z Brassica rapa HOM05D001038 ORTHO05D024222 5.4e-08 60.8 46 67.4
BcaNung02282 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-07 59.7 63 42.9
C03p34550 Brassica napus HOM05D001038 ORTHO05D040320 1.2e-07 59.7 59 52.5
C09p68940 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-07 59.7 63 42.9
BolC3t19468H Brassica oleracea HOM05D008073 ORTHO05D000309 1.2e-07 59.7 47 61.7
BolC7t44786H Brassica oleracea HOM05D001038 ORTHO05D000395 1.2e-07 59.7 63 42.9
C09p37880 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-07 59.3 60 45.0
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 1.6e-07 59.3 60 45.0
C06p00860 Brassica napus HOM05D001038 ORTHO05D000395 2.1e-07 58.9 60 45.0
BolC3t16968H Brassica oleracea HOM05D001038 ORTHO05D000395 2.1e-07 58.9 60 45.0
BolC7t41662H Brassica oleracea HOM05D001038 ORTHO05D031981 2.1e-07 58.9 59 49.2
BraA04t16612Z Brassica rapa HOM05D001038 ORTHO05D018639 2.1e-07 58.9 71 43.7
BolC3t20321H Brassica oleracea HOM05D001038 ORTHO05D000395 2.7e-07 58.5 60 45.0
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 3.5e-07 58.2 66 37.9
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 3.5e-07 58.2 66 37.9
A09p58370 Brassica napus HOM05D001038 ORTHO05D000395 4.6e-07 57.8 60 43.3
C07p60310 Brassica napus HOM05D001038 ORTHO05D000395 4.6e-07 57.8 64 40.6
BcaC06g32026 Brassica carinata HOM05D001038 ORTHO05D000395 6.0e-07 57.4 59 50.8
BraA07t29115Z Brassica rapa HOM05D001038 ORTHO05D000395 6.0e-07 57.4 65 47.7
BcaB05g21586 Brassica carinata HOM05D001038 ORTHO05D000395 7.8e-07 57.0 64 40.6
C04p37080 Brassica napus HOM05D034669 ORTHO05D000395 7.8e-07 57.0 46 58.7
BraA08t32580Z Brassica rapa HOM05D001038 ORTHO05D000395 7.8e-07 57.0 60 41.7
BcaB01g02362 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-06 56.6 64 42.2
BraA01t02128Z Brassica rapa HOM05D001038 ORTHO05D000395 1.0e-06 56.6 49 55.1
BcaC09g51573 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-06 56.2 64 40.6
C07p19510 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-06 56.2 64 48.4
BolC7t42469H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-06 56.2 64 48.4
C09p22250 Brassica napus HOM05D001038 ORTHO05D000395 1.7e-06 55.8 64 40.6
BolC5t34489H Brassica oleracea HOM05D001038 ORTHO05D000395 1.7e-06 55.8 60 41.7
BolC4t23574H Brassica oleracea HOM05D001038 ORTHO05D000395 2.3e-06 55.5 64 42.2
A04p08290 Brassica napus HOM05D001038 ORTHO05D024484 3.0e-06 55.1 53 49.1
BcaC09g51594 Brassica carinata HOM05D001038 ORTHO05D021830 3.9e-06 54.7 51 56.9
C01p11670 Brassica napus HOM05D001038 ORTHO05D021830 3.9e-06 54.7 51 56.9
BolC1t01131H Brassica oleracea HOM05D001038 ORTHO05D021830 3.9e-06 54.7 51 56.9
BcaB08g34364 Brassica carinata HOM05D001038 ORTHO05D000395 6.6e-06 53.9 64 39.1
C07p11920 Brassica napus HOM05D001038 ORTHO05D031981 6.6e-06 53.9 59 44.1
BraA04t17286Z Brassica rapa HOM05D001038 ORTHO05D021830 6.6e-06 53.9 48 56.2
BcaB08g35558 Brassica carinata HOM05D001038 ORTHO05D000395 8.6e-06 53.5 60 41.7
BNapus_Darmor_BZH_scaffold_97p00150 Brassica napus HOM05D001038 ORTHO05D000395 8.6e-06 53.5 61 52.5
BraA03t11730Z Brassica rapa HOM05D001038 ORTHO05D000395 8.6e-06 53.5 56 46.4


User provided reference genes

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