Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p25560 Brassica napus HOM05D022606 ORTHO05D024440 5.0e-41 170.6 83 100.0
BraA03t11772Z Brassica rapa HOM05D022606 ORTHO05D024440 3.6e-39 164.5 83 95.2
C03p30490 Brassica napus HOM05D022606 ORTHO05D024440 2.1e-31 138.7 76 92.1
BolC3t15397H Brassica oleracea HOM05D022606 ORTHO05D024440 2.1e-31 138.7 76 92.1
BcaB01g03225 Brassica carinata HOM05D002314 ORTHO05D002538 6.5e-09 63.9 64 60.9
BcaC02g12817 Brassica carinata HOM05D002314 ORTHO05D002538 2.1e-07 58.9 77 50.6
C04p01660 Brassica napus HOM05D002314 ORTHO05D002538 2.1e-07 58.9 77 50.6
BolC4t21818H Brassica oleracea HOM05D002314 ORTHO05D002538 2.1e-07 58.9 77 50.6
AL4G45620 Arabidopsis lyrata HOM05D002314 ORTHO05D002538 3.6e-07 58.2 79 51.9
BcaC02g12699 Brassica carinata HOM05D002314 ORTHO05D002538 3.6e-07 58.2 79 51.9
Thhalv10001514m.g Eutrema salsugineum HOM05D002314 ORTHO05D002538 3.6e-07 58.2 79 51.9
Sp4g28360 Schrenkiella parvula HOM05D002314 ORTHO05D002538 3.6e-07 58.2 79 51.9
CAN.G108.24 Capsicum annuum HOM05D002314 ORTHO05D002538 4.7e-07 57.8 78 46.2
FAN01G1704 Fragaria x ananassa HOM05D002314 ORTHO05D002538 4.7e-07 57.8 79 48.1
Aa31LG1G27690 Aethionema arabicum HOM05D002314 ORTHO05D002538 6.1e-07 57.4 77 49.4
Atru.chr5.620 Acer truncatum HOM05D002314 ORTHO05D002538 8.0e-07 57.0 77 46.8
CARHR141600 Cardamine hirsuta HOM05D002314 ORTHO05D002538 8.0e-07 57.0 77 51.9
COL.COLO4_06334 Corchorus olitorius HOM05D002314 ORTHO05D002538 1.0e-06 56.6 78 47.4
ECA232G2330 Erigeron canadensis HOM05D002314 ORTHO05D002538 1.0e-06 56.6 77 46.8
Peaxi162Scf00904g00323 Petunia axillaris HOM05D002314 ORTHO05D002538 1.0e-06 56.6 77 46.8
Sed0000085 Sechium edule HOM05D002314 ORTHO05D002538 1.0e-06 56.6 80 45.0
Cfa003835 Carpinus fangiana HOM05D002314 ORTHO05D002538 1.4e-06 56.2 77 49.4
Haze_15619 Corylus avellana HOM05D002314 ORTHO05D002538 1.4e-06 56.2 77 49.4
Nitab4.5_0000473g0120 Nicotiana tabacum HOM05D002314 ORTHO05D002538 1.4e-06 56.2 85 44.7
Sopen03g003390 Solanum pennellii HOM05D002314 ORTHO05D002538 1.4e-06 56.2 78 47.4
PGSC0003DMG400009071 Solanum tuberosum HOM05D002314 ORTHO05D002538 1.4e-06 56.2 78 47.4
ClCG01G000600 Citrullus lanatus HOM05D002314 ORTHO05D002538 1.8e-06 55.8 80 45.0
Dinv35304 Davidia involucrata HOM05D002314 ORTHO05D002538 1.8e-06 55.8 77 46.8
FAN06G1084 Fragaria x ananassa HOM05D002314 ORTHO05D002538 1.8e-06 55.8 77 45.5
Prupe.2G183400 Prunus persica HOM05D002314 ORTHO05D002538 1.8e-06 55.8 78 44.9
Sed0027386 Sechium edule HOM05D002314 ORTHO05D002538 1.8e-06 55.8 77 46.8
SGA_v2.0_scaffold5G02986 Striga asiatica HOM05D002314 ORTHO05D002538 1.8e-06 55.8 78 46.2
unitig_90.g27529 Utricularia gibba HOM05D002314 ORTHO05D002538 1.8e-06 55.8 77 49.4
BcaB01g06144 Brassica carinata HOM05D022606 ORTHO05D024440 2.3e-06 55.5 84 46.4
MELO3C005868.2 Cucumis melo HOM05D002314 ORTHO05D002538 2.3e-06 55.5 77 45.5
DCAR_020299 Daucus carota HOM05D002314 ORTHO05D002538 2.3e-06 55.5 78 47.4
Dinv28339 Davidia involucrata HOM05D002314 ORTHO05D002538 2.3e-06 55.5 78 46.2
Eucgr.K00326 Eucalyptus grandis HOM05D002314 ORTHO05D002538 2.3e-06 55.5 78 46.2
HanXRQChr14g0462821 Helianthus annuus HOM05D002314 ORTHO05D002538 2.3e-06 55.5 77 46.8
Oeu049099.1 Olea europaea HOM05D002314 ORTHO05D002538 2.3e-06 55.5 85 44.7
TAR636G1374 Trochodendron aralioides HOM05D002314 ORTHO05D002538 2.3e-06 55.5 78 44.9
CANSAT21G2441 Cannabis sativa HOM05D002314 ORTHO05D002538 3.0e-06 55.1 77 45.5
CiPaw.01G072000 Carya illinoinensis HOM05D002314 ORTHO05D002538 3.0e-06 55.1 77 46.8
Duzib068G0165 Durio zibethinus HOM05D002314 ORTHO05D002538 3.0e-06 55.1 77 45.5
Migut.B01834 Erythranthe guttata HOM05D002314 ORTHO05D002538 3.0e-06 55.1 85 43.5
HanXRQChr07g0207161 Helianthus annuus HOM05D002314 ORTHO05D002538 3.0e-06 55.1 77 46.8
Lj7A504T53 Lonicera japonica HOM05D002314 ORTHO05D002538 3.0e-06 55.1 77 44.2
MD01G1075800 Malus domestica HOM05D002314 ORTHO05D002538 3.0e-06 55.1 77 45.5
MD07G1144600 Malus domestica HOM05D002314 ORTHO05D002538 3.0e-06 55.1 77 46.8
Rhsim03G0198400 Rhododendron simsii HOM05D002314 ORTHO05D002538 3.0e-06 55.1 77 46.8
Rhsim09G0203600 Rhododendron simsii HOM05D002314 ORTHO05D002538 3.0e-06 55.1 77 45.5
Sed0021545 Sechium edule HOM05D002314 ORTHO05D002538 3.0e-06 55.1 77 44.2
TAR374G0144 Trochodendron aralioides HOM05D002314 ORTHO05D002538 3.0e-06 55.1 77 48.1
vmacro06578 Vaccinium macrocarpon HOM05D002314 ORTHO05D002538 3.0e-06 55.1 77 46.8
vmacro13147 Vaccinium macrocarpon HOM05D002314 ORTHO05D002538 3.0e-06 55.1 77 45.5
GSVIVG01027048001 Vitis vinifera HOM05D002314 ORTHO05D002538 3.0e-06 55.1 77 45.5
Actinidia08625 Actinidia chinensis HOM05D002314 ORTHO05D002538 4.0e-06 54.7 77 45.5
Actinidia34196 Actinidia chinensis HOM05D002314 ORTHO05D002538 4.0e-06 54.7 77 45.5
Aqoxy5G04116 Aquilegia oxysepala HOM05D002314 ORTHO05D002538 4.0e-06 54.7 77 44.2
ClCG05G001080 Citrullus lanatus HOM05D002314 ORTHO05D002538 4.0e-06 54.7 77 44.2
MELO3C006060.2 Cucumis melo HOM05D002314 ORTHO05D002538 4.0e-06 54.7 77 44.2
CsaV3_3G008410 Cucumis sativus L. HOM05D002314 ORTHO05D002538 4.0e-06 54.7 77 44.2
CsaV3_5G000700 Cucumis sativus L. HOM05D002314 ORTHO05D002538 4.0e-06 54.7 80 43.8
DCAR_014530 Daucus carota HOM05D002314 ORTHO05D006254 4.0e-06 54.7 77 46.8
FAN10G0651 Fragaria x ananassa HOM05D002314 ORTHO05D002538 4.0e-06 54.7 77 45.5
FAN10G2841 Fragaria x ananassa HOM05D002314 ORTHO05D002538 4.0e-06 54.7 77 45.5
Lsat_1_v5_gn_2_134241 Lactuca sativa HOM05D002314 ORTHO05D002538 4.0e-06 54.7 77 45.5
Nitab4.5_0009232g0030 Nicotiana tabacum HOM05D002314 ORTHO05D002538 4.0e-06 54.7 77 44.2
Rhsim07G0006900 Rhododendron simsii HOM05D002314 ORTHO05D002538 4.0e-06 54.7 77 45.5
RcHm_v2.0_Chr1g0358701 Rosa chinensis HOM05D002314 ORTHO05D002538 4.0e-06 54.7 77 45.5
Sabra02G0144200 Salix brachista HOM05D002314 ORTHO05D002538 4.0e-06 54.7 77 45.5
THA.LOC104817335 Tarenaya hassleriana HOM05D002314 ORTHO05D002538 4.0e-06 54.7 77 46.8
GSVIVG01028734001 Vitis vinifera HOM05D002314 ORTHO05D002538 4.0e-06 54.7 77 44.2
Actinidia20195 Actinidia chinensis HOM05D002314 ORTHO05D002538 5.2e-06 54.3 77 45.5
ATR0099G005 Amborella trichopoda HOM05D002314 ORTHO05D002538 5.2e-06 54.3 77 45.5
Cc02_g01920 Coffea canephora HOM05D002314 ORTHO05D002538 5.2e-06 54.3 78 44.9
Hma1.2p1_0384F.1_g141060 Hydrangea macrophylla HOM05D002314 ORTHO05D002538 5.2e-06 54.3 77 45.5
Lj3A911T23 Lonicera japonica HOM05D002314 ORTHO05D002538 5.2e-06 54.3 77 45.5
Nitab4.5_0002589g0020 Nicotiana tabacum HOM05D002314 ORTHO05D002538 5.2e-06 54.3 77 45.5
Peaxi162Scf01012g00124 Petunia axillaris HOM05D002314 ORTHO05D002538 5.2e-06 54.3 77 45.5
Potri.002G167700 Populus trichocarpa HOM05D002314 ORTHO05D002538 5.2e-06 54.3 77 45.5
Solyc03g007430.3 Solanum lycopersicum HOM05D002314 ORTHO05D002538 5.2e-06 54.3 78 44.9
AagrBONN_evm.TU.Sc2ySwM_228.4174 Anthoceros agrestis HOM05D002314 ORTHO05D002538 6.8e-06 53.9 77 45.5
CAN.G986.44 Capsicum annuum HOM05D002314 ORTHO05D002538 6.8e-06 53.9 80 42.5
COL.COLO4_35660 Corchorus olitorius HOM05D002314 ORTHO05D002538 6.8e-06 53.9 77 45.5
Migut.F01052 Erythranthe guttata HOM05D002314 ORTHO05D002538 6.8e-06 53.9 77 44.2
FvH4_7g30980 Fragaria vesca HOM05D002314 ORTHO05D002538 6.8e-06 53.9 77 45.5
FAN01G1731 Fragaria x ananassa HOM05D002314 ORTHO05D002538 6.8e-06 53.9 77 45.5
FAN03G0637 Fragaria x ananassa HOM05D002314 ORTHO05D002538 6.8e-06 53.9 77 45.5
FAN03G3003 Fragaria x ananassa HOM05D002314 ORTHO05D002538 6.8e-06 53.9 77 45.5
FAN06G0020 Fragaria x ananassa HOM05D002314 ORTHO05D002538 6.8e-06 53.9 77 45.5
FAN06G3560 Fragaria x ananassa HOM05D002314 ORTHO05D002538 6.8e-06 53.9 77 45.5
FAN10G0709 Fragaria x ananassa HOM05D002314 ORTHO05D002538 6.8e-06 53.9 77 45.5
FAN10G0776 Fragaria x ananassa HOM05D002314 ORTHO05D002538 6.8e-06 53.9 77 45.5
Lalb_Chr08g0240621 Lupinus albus HOM05D002314 ORTHO05D002538 6.8e-06 53.9 86 43.0
Manes.01G249200 Manihot esculenta HOM05D002314 ORTHO05D002538 6.8e-06 53.9 78 44.9
Oeu007846.2 Olea europaea HOM05D002314 ORTHO05D002538 6.8e-06 53.9 77 45.5
PGR042G2537 Punica granatum HOM05D002314 ORTHO05D002538 6.8e-06 53.9 77 44.2
QL09p011009 Quercus lobata HOM05D002314 ORTHO05D002538 6.8e-06 53.9 77 45.5
RcHm_v2.0_Chr1g0380061 Rosa chinensis HOM05D002314 ORTHO05D002538 6.8e-06 53.9 77 45.5
TWI59G1056 Tripterygium wilfordii HOM05D002314 ORTHO05D002538 6.8e-06 53.9 77 45.5
ATR1100G004 Amborella trichopoda HOM05D002314 ORTHO05D002538 8.8e-06 53.5 77 45.5
Aqoxy7G00160 Aquilegia oxysepala HOM05D002314 ORTHO05D002538 8.8e-06 53.5 77 44.2
arahy.Tifrunner.gnm1.ann1.73495D Arachis hypogaea HOM05D002314 ORTHO05D002538 8.8e-06 53.5 77 46.8
arahy.Tifrunner.gnm1.ann1.ULR4NL Arachis hypogaea HOM05D002314 ORTHO05D002538 8.8e-06 53.5 77 46.8
CDE04G0599 Ceratophyllum demersum HOM05D002314 ORTHO05D002538 8.8e-06 53.5 77 46.8
AUR62004450 Chenopodium quinoa HOM05D002314 ORTHO05D002538 8.8e-06 53.5 77 46.8
Manes.06G156800 Manihot esculenta HOM05D002314 ORTHO05D002538 8.8e-06 53.5 77 44.2
Medtr3g090820 Medicago truncatula HOM05D002314 ORTHO05D002538 8.8e-06 53.5 84 41.7
Nitab4.5_0000305g0150 Nicotiana tabacum HOM05D002314 ORTHO05D002538 8.8e-06 53.5 78 42.3
Thecc.03G192300 Theobroma cacao HOM05D002314 ORTHO05D002538 8.8e-06 53.5 77 44.2


User provided reference genes

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