Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g05111 Brassica carinata HOM05D006419 ORTHO05D008096 2.6e-52 208.4 100 100.0
A03p25320 Brassica napus HOM05D006419 ORTHO05D008096 2.6e-52 208.4 100 100.0
C03p30210 Brassica napus HOM05D006419 ORTHO05D008096 2.6e-52 208.4 100 100.0
BolC3t15370H Brassica oleracea HOM05D006419 ORTHO05D008096 2.6e-52 208.4 100 100.0
BraA03t11736Z Brassica rapa HOM05D006419 ORTHO05D008096 5.8e-52 207.2 100 99.0
BcaB01g03257 Brassica carinata HOM05D006419 ORTHO05D008096 5.4e-50 200.7 100 96.0
Thhalv10001692m.g Eutrema salsugineum HOM05D006419 ORTHO05D008096 2.7e-49 198.4 100 93.0
Sp4g27740 Schrenkiella parvula HOM05D006419 ORTHO05D008096 3.5e-49 198.0 100 93.0
CARHR140920 Cardamine hirsuta HOM05D006419 ORTHO05D008096 5.6e-47 190.7 100 89.0
AT2G45695 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 1.2e-46 189.5 102 88.2
AL5G43350 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 1.6e-46 189.1 100 89.0
Carub.0004s2835 Capsella rubella HOM05D006419 ORTHO05D008096 1.6e-46 189.1 102 89.2
TWI59G0287 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 4.7e-46 187.6 100 86.0
Phvul.010G089300 Phaseolus vulgaris HOM05D006419 ORTHO05D008096 8.1e-46 186.8 100 85.0
Aa31LG1G27170 Aethionema arabicum HOM05D006419 ORTHO05D008096 1.1e-45 186.4 100 88.0
Duzib138G0401 Durio zibethinus HOM05D006419 ORTHO05D008096 1.4e-45 186.0 100 84.0
Lalb_Chr10g0097581 Lupinus albus HOM05D006419 ORTHO05D008096 1.4e-45 186.0 100 86.0
Cfa001844 Carpinus fangiana HOM05D006419 ORTHO05D008096 1.8e-45 185.7 100 86.0
ClCG06G000160 Citrullus lanatus HOM05D006419 ORTHO05D008096 1.8e-45 185.7 100 86.0
QL08p050901 Quercus lobata HOM05D006419 ORTHO05D008096 2.3e-45 185.3 99 83.8
CANSAT56G1223 Cannabis sativa HOM05D006419 ORTHO05D008096 3.1e-45 184.9 100 85.0
Aqoxy7G00481 Aquilegia oxysepala HOM05D006419 ORTHO05D008096 4.0e-45 184.5 100 86.0
AT3G61113 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 4.0e-45 184.5 100 87.0
COL.COLO4_12638 Corchorus olitorius HOM05D006419 ORTHO05D008096 4.0e-45 184.5 100 85.0
arahy.Tifrunner.gnm1.ann1.V3JJAU Arachis hypogaea HOM05D006419 ORTHO05D008096 5.2e-45 184.1 100 85.0
THA.LOC104802008 Tarenaya hassleriana HOM05D006419 ORTHO05D008096 6.8e-45 183.7 100 84.0
Lj1g0008204 Lotus japonicus HOM05D006419 ORTHO05D008096 8.9e-45 183.3 100 85.0
Atru.chr5.383 Acer truncatum HOM05D006419 ORTHO05D008096 1.2e-44 183.0 100 85.0
Lalb_Chr17g0340031 Lupinus albus HOM05D006419 ORTHO05D008096 1.2e-44 183.0 100 84.0
PGR042G1692 Punica granatum HOM05D006419 ORTHO05D008096 1.2e-44 183.0 100 82.0
Haze_16703 Corylus avellana HOM05D006419 ORTHO05D008096 1.5e-44 182.6 100 83.0
Manes.01G263100 Manihot esculenta HOM05D006419 ORTHO05D008096 1.5e-44 182.6 100 82.0
CiPaw.01G257500 Carya illinoinensis HOM05D006419 ORTHO05D008096 2.6e-44 181.8 100 85.0
TWI14G0146 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 2.6e-44 181.8 100 83.0
Glyma.07G080100 Glycine max HOM05D006419 ORTHO05D008096 3.4e-44 181.4 100 83.0
Prupe.1G200200 Prunus persica HOM05D006419 ORTHO05D008096 3.4e-44 181.4 100 82.0
Hma1.2p1_0132F.1_g060780 Hydrangea macrophylla HOM05D006419 ORTHO05D008096 4.4e-44 181.0 100 85.0
Duzib133G0791 Durio zibethinus HOM05D006419 ORTHO05D008096 7.5e-44 180.3 100 82.0
Ca_23766_v3 Cicer arietinum L. HOM05D006419 ORTHO05D008096 9.9e-44 179.9 100 83.0
Eucgr.E01325 Eucalyptus grandis HOM05D006419 ORTHO05D008096 9.9e-44 179.9 100 82.0
Nn6g34296 Nelumbo nucifera HOM05D006419 ORTHO05D008096 9.9e-44 179.9 99 83.8
GSVIVG01027592001 Vitis vinifera HOM05D006419 ORTHO05D008096 9.9e-44 179.9 100 85.0
Actinidia31456 Actinidia chinensis HOM05D006419 ORTHO05D008096 1.3e-43 179.5 100 82.0
Gohir.D11G088500 Gossypium hirsutum HOM05D006419 ORTHO05D008096 1.3e-43 179.5 100 80.0
Gorai.007G094600 Gossypium raimondii HOM05D006419 ORTHO05D008096 1.3e-43 179.5 100 80.0
MD04G1046600 Malus domestica HOM05D006419 ORTHO05D008096 1.3e-43 179.5 100 84.0
Sc23g0003380 Simmondsia chinensis HOM05D006419 ORTHO05D008096 1.3e-43 179.5 100 84.0
MELO3C022522.2 Cucumis melo HOM05D006419 ORTHO05D008096 1.7e-43 179.1 100 83.0
Actinidia09582 Actinidia chinensis HOM05D006419 ORTHO05D008096 3.7e-43 177.9 100 82.0
Gohir.A11G084400 Gossypium hirsutum HOM05D006419 ORTHO05D008096 3.7e-43 177.9 100 80.0
Lsat_1_v5_gn_8_87621 Lactuca sativa HOM05D006419 ORTHO05D008096 3.7e-43 177.9 100 82.0
Thecc.01G370100 Theobroma cacao HOM05D006419 ORTHO05D008096 3.7e-43 177.9 100 79.0
HanXRQChr04g0126261 Helianthus annuus HOM05D006419 ORTHO05D008096 4.9e-43 177.6 100 82.0
Hund16966 Selenicereus undatus HOM05D006419 ORTHO05D008096 4.9e-43 177.6 100 82.0
TPR.G17971 Trifolium pratense HOM05D006419 ORTHO05D008096 4.9e-43 177.6 102 82.4
Sed0009830 Sechium edule HOM05D006419 ORTHO05D008096 6.4e-43 177.2 100 82.0
Migut.C01180 Erythranthe guttata HOM05D006419 ORTHO05D008096 8.3e-43 176.8 100 84.0
Rhsim07G0022300 Rhododendron simsii HOM05D006419 ORTHO05D008096 8.3e-43 176.8 101 82.2
Ciclev10023026m.g Citrus clementina HOM05D006419 ORTHO05D008096 1.1e-42 176.4 100 82.0
FvH4_1g27190 Fragaria vesca HOM05D006419 ORTHO05D008096 1.1e-42 176.4 100 79.0
RcHm_v2.0_Chr3g0487581 Rosa chinensis HOM05D006419 ORTHO05D008096 1.1e-42 176.4 100 79.0
Dinv32413 Davidia involucrata HOM05D006419 ORTHO05D008096 1.4e-42 176.0 100 82.0
Medtr8g032860 Medicago truncatula HOM05D006419 ORTHO05D008096 1.4e-42 176.0 102 82.4
ECA236G2030 Erigeron canadensis HOM05D002941 ORTHO05D007802 5.4e-42 174.1 98 81.6
PGSC0003DMG400000132 Solanum tuberosum HOM05D006419 ORTHO05D008096 5.4e-42 174.1 100 82.0
Dinv43747 Davidia involucrata HOM05D006419 ORTHO05D008096 7.1e-42 173.7 100 81.0
Oeu050256.1 Olea europaea HOM05D006419 ORTHO05D008096 7.1e-42 173.7 100 81.0
PSO478G5220 Papaver somniferum HOM05D006419 ORTHO05D008096 7.1e-42 173.7 100 82.0
TAR636G0701 Trochodendron aralioides HOM05D006419 ORTHO05D008096 7.1e-42 173.7 100 82.0
Glyma.03G018600 Glycine max HOM05D006419 ORTHO05D008096 9.2e-42 173.3 100 81.0
MBI04_g28569_MAGBIO Magnolia biondii HOM05D006419 ORTHO05D008096 9.2e-42 173.3 100 80.0
Psat4g151440 Pisum sativum HOM05D006419 ORTHO05D008096 1.2e-41 172.9 102 79.4
Cc02_g37090 Coffea canephora HOM05D006419 ORTHO05D008096 1.6e-41 172.6 100 80.0
Nitab4.5_0001127g0020 Nicotiana tabacum HOM05D006419 ORTHO05D008096 1.6e-41 172.6 100 80.0
Solyc01g091890.3 Solanum lycopersicum HOM05D006419 ORTHO05D008096 1.6e-41 172.6 100 81.0
Sopen01g037660 Solanum pennellii HOM05D006419 ORTHO05D008096 1.6e-41 172.6 100 81.0
PSO782G1455 Papaver somniferum HOM05D006419 ORTHO05D008096 2.1e-41 172.2 100 80.0
Nitab4.5_0013229g0010 Nicotiana tabacum HOM05D006419 ORTHO05D008096 2.7e-41 171.8 100 79.0
Peaxi162Scf00021g00237 Petunia axillaris HOM05D006419 ORTHO05D008096 2.7e-41 171.8 100 81.0
Oeu032965.1 Olea europaea HOM05D006419 ORTHO05D008096 3.5e-41 171.4 100 79.0
MSTRG.25406 Avicennia marina HOM05D006419 ORTHO05D008096 4.6e-41 171.0 100 81.0
EL10Ac1g00975 Beta vulgaris HOM05D006419 ORTHO05D008096 6.0e-41 170.6 101 80.2
SGA_v2.0_scaffold24G10498 Striga asiatica HOM05D006419 ORTHO05D008096 6.0e-41 170.6 100 80.0
TAR375G0946 Trochodendron aralioides HOM05D006419 ORTHO05D008096 6.0e-41 170.6 100 82.0
Potri.014G078200 Populus trichocarpa HOM05D006419 ORTHO05D008096 1.7e-40 169.1 100 79.0
MSTRG.1480 Avicennia marina HOM05D006419 ORTHO05D008096 2.3e-40 168.7 101 79.2
Sabra14G0054000 Salix brachista HOM05D006419 ORTHO05D008096 2.3e-40 168.7 101 81.2
CsaV3_6G005910 Cucumis sativus L. HOM05D006419 ORTHO05D008096 3.0e-40 168.3 98 78.6
arahy.Tifrunner.gnm1.ann1.PAP2UH Arachis hypogaea HOM05D006419 ORTHO05D008096 3.9e-40 167.9 91 83.5
BcaB06g29431 Brassica carinata HOM05D006419 ORTHO05D008096 3.9e-40 167.9 87 90.8
VMungo0331G1339 Vigna mungo HOM05D006419 ORTHO05D008096 8.6e-40 166.8 126 65.9
CAN.G170.61 Capsicum annuum HOM05D006419 ORTHO05D008096 9.5e-39 163.3 112 70.5
vmacro20977 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 6.2e-38 160.6 100 74.0
SalBow8G2260 Salvia bowleyana HOM05D006419 ORTHO05D008096 3.1e-37 158.3 92 80.4
SGA_v2.0_scaffold486G52389 Striga asiatica HOM05D006419 ORTHO05D008096 8.9e-37 156.8 98 76.5
Hund09553 Selenicereus undatus HOM05D006419 ORTHO05D008096 2.0e-36 155.6 91 79.1
ATR0757G048 Amborella trichopoda HOM05D006419 ORTHO05D008096 4.4e-36 154.5 100 70.0
CDE11G0029 Ceratophyllum demersum HOM05D006419 ORTHO05D008096 1.7e-35 152.5 100 67.0
unitig_37.g12884 Utricularia gibba HOM05D006419 ORTHO05D008096 1.7e-35 152.5 91 79.1
vmacro13347 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 2.2e-35 152.1 107 69.2
Pp3c15_11080 Physcomitrium patens HOM05D006419 ORTHO05D008096 2.7e-33 145.2 100 65.0
Mapoly0004s0131 Marchantia polymorpha HOM05D006419 ORTHO05D008096 6.0e-33 144.1 100 66.0
SEGI_03184 Sequoiadendron giganteum HOM05D006419 ORTHO05D008096 4.3e-31 137.9 98 63.3
AagrBONN_evm.TU.Sc2ySwM_228.3881 Anthoceros agrestis HOM05D006419 ORTHO05D008096 1.6e-30 136.0 101 60.4
Cre10.g426000 Chlamydomonas reinhardtii HOM05D006419 ORTHO05D008096 1.6e-30 136.0 100 59.0
HPP92_022119 Vanilla planifolia HOM05D006419 ORTHO05D008096 1.4e-29 132.9 94 68.1
AL4G44870 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 2.4e-29 132.1 73 87.7
FAN19G0283 Fragaria x ananassa HOM05D006419 ORTHO05D008096 9.0e-29 130.2 83 69.9
Carub.0005s2776 Capsella rubella HOM05D006419 ORTHO05D008096 1.5e-28 129.4 67 88.1
PSO782G2080 Papaver somniferum HOM05D006419 ORTHO05D008096 2.9e-27 125.2 65 84.6
FAN23G1662 Fragaria x ananassa HOM05D006419 ORTHO05D008096 8.4e-27 123.6 65 81.5
Ah.15g094110 Amaranthus hybridus HOM05D006419 ORTHO05D008096 5.4e-26 120.9 93 64.5
FAN28G0164 Fragaria x ananassa HOM05D006419 ORTHO05D008096 1.2e-25 119.8 65 78.5
SMO367G0935 Selaginella moellendorffii HOM05D006419 ORTHO05D008096 3.5e-25 118.2 92 62.0
PRCOL_00003278 Prasinoderma coloniale HOM05D006419 ORTHO05D008096 1.0e-24 116.7 101 56.4
A04p33960 Brassica napus HOM05D006419 ORTHO05D008096 5.1e-24 114.4 61 86.9
FAN28G1401 Fragaria x ananassa HOM05D006419 ORTHO05D008096 2.8e-22 108.6 74 67.6
Haze_27740 Corylus avellana HOM05D006419 ORTHO05D008096 2.4e-18 95.5 103 43.7
CSS0035991 Camellia sinensis var. sinensis HOM05D006419 ORTHO05D008096 8.7e-16 87.0 53 73.6
Zm00001eb320180 Zea mays HOM05D006419 ORTHO05D008096 4.0e-13 78.2 62 64.5
BraA04t18857Z Brassica rapa HOM05D006419 ORTHO05D008096 2.0e-12 75.9 43 76.7
Gohir.D11G088350 Gossypium hirsutum HOM05D006419 ORTHO05D008096 1.5e-07 59.7 38 68.4
Dinv28502 Davidia involucrata HOM05D000001 ORTHO05D000003 2.5e-07 58.9 43 58.1
SHI13486 Sapria himalayana HOM05D006419 ORTHO05D008096 4.8e-06 54.7 39 59.0


User provided reference genes

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