Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p18360 Brassica napus HOM05D007973 ORTHO05D011027 1.3e-86 323.2 174 100.0
BraA03t11099Z Brassica rapa HOM05D007973 ORTHO05D011027 5.8e-84 314.3 174 96.6
BcaC01g05887 Brassica carinata HOM05D007973 ORTHO05D011027 1.9e-79 299.3 175 94.3
BcaB01g03935 Brassica carinata HOM05D007973 ORTHO05D011027 8.2e-70 267.3 180 82.8
BcaB01g03937 Brassica carinata HOM05D007973 ORTHO05D011027 1.0e-64 250.4 187 79.1
BolC3t14526H Brassica oleracea HOM05D007973 ORTHO05D011027 2.8e-62 242.3 182 78.0
BcaC01g05861 Brassica carinata HOM05D007973 ORTHO05D011027 8.2e-62 240.7 173 80.3
C03p21430 Brassica napus HOM05D007973 ORTHO05D011027 4.1e-61 238.4 182 77.5
BcaB01g03938 Brassica carinata HOM05D007973 ORTHO05D011027 6.7e-56 221.1 185 72.4
C03p21640 Brassica napus HOM05D007973 ORTHO05D011027 6.9e-53 211.1 173 72.8
BolC3t14548H Brassica oleracea HOM05D007973 ORTHO05D011027 6.9e-53 211.1 173 72.8
Thhalv10017685m.g Eutrema salsugineum HOM05D007973 ORTHO05D011027 1.2e-41 173.7 123 77.2
AL4G28640 Arabidopsis lyrata HOM05D007973 ORTHO05D011027 5.3e-37 158.3 156 63.5
AL4G28320 Arabidopsis lyrata HOM05D007973 ORTHO05D011027 6.5e-35 151.4 166 59.6
AT2G32820 Arabidopsis thaliana HOM05D007973 ORTHO05D011027 1.9e-34 149.8 181 54.7
Carub.0004s1425 Capsella rubella HOM05D007973 ORTHO05D011027 1.2e-31 140.6 166 56.0
Thhalv10017705m.g Eutrema salsugineum HOM05D007973 ORTHO05D011027 1.2e-31 140.6 85 87.1
AT2G33300 Arabidopsis thaliana HOM05D007973 ORTHO05D011027 2.8e-30 136.0 170 50.6
AT2G33090 Arabidopsis thaliana HOM05D007973 ORTHO05D011027 4.8e-30 135.2 122 60.7
BolC3t14525H Brassica oleracea HOM05D007973 ORTHO05D011027 7.7e-28 127.9 162 51.9
BcaB01g03962 Brassica carinata HOM05D007973 ORTHO05D011027 1.0e-27 127.5 155 51.6
BcaB01g03963 Brassica carinata HOM05D007973 ORTHO05D011027 1.0e-27 127.5 155 51.6
BcaC01g05888 Brassica carinata HOM05D007973 ORTHO05D011027 7.2e-26 121.3 162 49.4
C03p21420 Brassica napus HOM05D007973 ORTHO05D011027 7.2e-26 121.3 162 49.4
CARHR120790 Cardamine hirsuta HOM05D007973 ORTHO05D011027 2.1e-25 119.8 173 48.6
Thhalv10023971m.g Eutrema salsugineum HOM05D007973 ORTHO05D011027 1.5e-23 113.6 127 54.3
Thhalv10024105m.g Eutrema salsugineum HOM05D007973 ORTHO05D011027 3.4e-23 112.5 158 51.9
Aa31LG10G13910 Aethionema arabicum HOM05D007973 ORTHO05D011027 4.1e-21 105.5 126 48.4
Aa31LG10G13500 Aethionema arabicum HOM05D007973 ORTHO05D011027 2.0e-20 103.2 132 45.5
BcaB02g10486 Brassica carinata HOM05D007973 ORTHO05D011363 2.5e-18 96.3 102 48.0
C04p17030 Brassica napus HOM05D007973 ORTHO05D011363 2.5e-18 96.3 102 50.0
A05p13330 Brassica napus HOM05D007973 ORTHO05D011363 3.3e-18 95.9 102 50.0
C04p17440 Brassica napus HOM05D007973 ORTHO05D011363 3.3e-18 95.9 100 52.0
BolC4t23294H Brassica oleracea HOM05D007973 ORTHO05D011363 3.3e-18 95.9 100 52.0
BraA05t20272Z Brassica rapa HOM05D007973 ORTHO05D011363 3.3e-18 95.9 102 50.0
A05p12970 Brassica napus HOM05D007973 ORTHO05D011363 7.3e-18 94.7 143 40.6
BraA05t20237Z Brassica rapa HOM05D007973 ORTHO05D011363 7.3e-18 94.7 143 40.6
Sp4g14980 Schrenkiella parvula HOM05D007973 ORTHO05D011363 9.5e-18 94.4 141 41.8
AT2G13640 Arabidopsis thaliana HOM05D007973 ORTHO05D011363 1.2e-17 94.0 130 46.2
THA.LOC104798702 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 1.2e-17 94.0 84 57.1
A05p12940 Brassica napus HOM05D007973 ORTHO05D011363 2.8e-17 92.8 143 40.6
BraA05t20234Z Brassica rapa HOM05D007973 ORTHO05D011363 2.8e-17 92.8 143 40.6
AL4G22500 Arabidopsis lyrata HOM05D007973 ORTHO05D011363 3.6e-17 92.4 172 40.1
AL4G22510 Arabidopsis lyrata HOM05D007973 ORTHO05D011363 3.6e-17 92.4 172 40.1
C04p17050 Brassica napus HOM05D007973 ORTHO05D011363 8.0e-17 91.3 143 39.9
BolC4t23258H Brassica oleracea HOM05D007973 ORTHO05D011363 8.0e-17 91.3 143 39.9
THA.LOC104820138 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 1.4e-16 90.5 155 40.6
THA.LOC104820139 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 1.4e-16 90.5 155 40.6
AT2G27780 Arabidopsis thaliana HOM05D007973 ORTHO05D011363 1.8e-16 90.1 137 43.1
A05p13350 Brassica napus HOM05D007973 ORTHO05D011363 2.3e-16 89.7 138 43.5
BraA05t20274Z Brassica rapa HOM05D007973 ORTHO05D011363 2.3e-16 89.7 138 43.5
BcaB02g10456 Brassica carinata HOM05D007973 ORTHO05D011363 4.0e-16 89.0 161 39.8
THA.LOC104819096 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 5.2e-16 88.6 165 40.6
Carub.0004s1401 Capsella rubella HOM05D007973 ORTHO05D011363 6.8e-16 88.2 144 42.4
BcaB02g10454 Brassica carinata HOM05D007973 ORTHO05D011363 8.9e-16 87.8 144 39.6
THA.LOC104813254 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 8.9e-16 87.8 87 50.6
BcaB02g10484 Brassica carinata HOM05D007973 ORTHO05D011363 2.0e-15 86.7 172 37.2
AT5G27310 Arabidopsis thaliana HOM05D007973 ORTHO05D011363 4.4e-15 85.5 130 43.1
CARHR126530 Cardamine hirsuta HOM05D007973 ORTHO05D011363 1.4e-13 80.5 145 40.7
BcaC02g11347 Brassica carinata HOM05D007973 ORTHO05D011363 1.5e-10 70.5 102 40.2
Cpa.g.sc17.122 Carica papaya HOM05D002276 ORTHO05D002381 1.5e-10 70.5 81 45.7
Cpa.g.c30173.2 Carica papaya HOM05D002276 ORTHO05D002381 3.3e-10 69.3 81 44.4
Cpa.g.c31254 Carica papaya HOM05D002276 ORTHO05D002381 3.3e-10 69.3 81 44.4
Cpa.g.c34878 Carica papaya HOM05D002276 ORTHO05D002381 3.3e-10 69.3 81 44.4
Cpa.g.sc17.144 Carica papaya HOM05D002276 ORTHO05D002381 3.3e-10 69.3 81 44.4
Cpa.g.sc17.145 Carica papaya HOM05D002276 ORTHO05D002381 3.3e-10 69.3 81 44.4
Cpa.g.c27218.2 Carica papaya HOM05D002276 ORTHO05D002381 7.3e-10 68.2 81 43.2
Cpa.g.sc17.140 Carica papaya HOM05D002276 ORTHO05D002381 7.3e-10 68.2 81 43.2
Cpa.g.c41267 Carica papaya HOM05D002276 ORTHO05D002381 1.6e-09 67.0 76 47.4
Cpa.g.sc17.143 Carica papaya HOM05D007973 ORTHO05D011027 1.6e-09 67.0 76 47.4
Cpa.g.sc17.131 Carica papaya HOM05D002276 ORTHO05D002381 2.1e-09 66.6 81 42.0
Cpa.g.c40325 Carica papaya HOM05D002276 ORTHO05D002381 2.8e-09 66.2 81 42.0
Cpa.g.sc17.136 Carica papaya HOM05D002276 ORTHO05D002381 3.6e-09 65.9 81 43.2
Cpa.g.sc736.3 Carica papaya HOM05D002276 ORTHO05D002381 1.1e-08 64.3 82 40.2
GSVIVG01030171001 Vitis vinifera HOM05D002276 ORTHO05D002381 5.2e-08 62.0 88 38.6
Cpa.g.sc956.1 Carica papaya HOM05D002276 ORTHO05D002381 6.8e-08 61.6 72 45.8
Eucgr.A00774 Eucalyptus grandis HOM05D002276 ORTHO05D002381 6.8e-08 61.6 88 39.8
BcaC02g11344 Brassica carinata HOM05D007973 ORTHO05D011363 8.9e-08 61.2 134 32.1
Cpa.g.sc17.139 Carica papaya HOM05D007973 ORTHO05D011027 2.6e-07 59.7 68 47.1
BolC8t48477H Brassica oleracea HOM05D007973 ORTHO05D011363 5.8e-07 58.5 114 39.5
PGR031G2695 Punica granatum HOM05D002276 ORTHO05D002381 7.5e-07 58.2 88 37.5
BcaC07g38070 Brassica carinata HOM05D007973 ORTHO05D011363 1.3e-06 57.4 117 39.3
BolC8t48474H Brassica oleracea HOM05D007973 ORTHO05D011363 1.3e-06 57.4 114 39.5
TAR369G0520 Trochodendron aralioides HOM05D002276 ORTHO05D002381 1.7e-06 57.0 88 35.2
TAR623G1532 Trochodendron aralioides HOM05D002276 ORTHO05D002381 1.7e-06 57.0 88 35.2
Cpa.g.sc6.370 Carica papaya HOM05D002276 ORTHO05D002381 2.2e-06 56.6 85 34.1
Atru.chr8.94 Acer truncatum HOM05D002276 ORTHO05D002381 6.4e-06 55.1 88 37.5
Dinv16968 Davidia involucrata HOM05D002276 ORTHO05D002381 8.3e-06 54.7 88 34.1


User provided reference genes

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