Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 1.2e-214 750.4 436 100.0
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 4.6e-211 738.4 436 98.6
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 2.2e-197 693.0 442 92.3
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 2.2e-197 693.0 442 92.3
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 1.0e-194 684.1 442 91.2
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 3.9e-178 629.0 459 83.0
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 3.4e-174 615.9 476 77.7
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 1.2e-171 607.4 486 76.1
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 9.1e-167 591.3 482 75.5
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 1.9e-164 583.6 472 70.3
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 4.4e-161 572.4 480 73.5
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 4.4e-161 572.4 474 74.9
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 2.5e-156 556.6 465 68.8
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 6.5e-141 505.4 483 66.9
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 4.7e-131 472.6 451 61.2
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 1.6e-115 421.0 517 53.2
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 2.8e-115 420.2 498 56.4
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 1.1e-114 418.3 506 56.9
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 1.8e-114 417.5 505 58.8
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 7.5e-113 412.1 507 59.4
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 1.1e-111 408.3 504 58.5
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 2.3e-109 400.6 537 51.6
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 3.0e-109 400.2 504 57.9
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 3.0e-109 400.2 504 57.9
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 1.5e-108 397.9 367 70.3
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 3.6e-107 393.3 367 65.4
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 4.7e-107 392.9 368 67.4
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 6.2e-107 392.5 531 53.7
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 1.1e-106 391.7 363 53.7
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 1.8e-106 391.0 368 54.9
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 1.8e-106 391.0 527 53.7
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 5.2e-106 389.4 356 71.3
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 1.2e-105 388.3 427 62.5
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 4.4e-105 386.3 505 53.9
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 4.4e-105 386.3 376 64.9
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 1.3e-104 384.8 359 65.5
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 6.4e-104 382.5 525 52.4
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 6.4e-104 382.5 367 64.3
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.4e-103 380.6 370 64.9
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 7.1e-103 379.0 367 52.3
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.2e-102 378.3 354 64.1
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 1.6e-102 377.9 409 61.6
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 2.1e-102 377.5 354 67.2
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 3.5e-102 376.7 383 67.9
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 3.5e-102 376.7 374 63.6
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 4.6e-102 376.3 368 65.2
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 6.0e-102 375.9 367 66.2
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 7.8e-102 375.6 371 64.7
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 1.3e-101 374.8 366 63.7
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 2.3e-101 374.0 354 67.5
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 3.0e-101 373.6 366 63.4
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 3.9e-101 373.2 365 58.6
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 5.1e-101 372.9 367 66.8
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 5.1e-101 372.9 367 66.8
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 1.1e-100 371.7 366 67.8
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 2.5e-100 370.5 439 59.0
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 5.6e-100 369.4 366 67.5
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 7.3e-100 369.0 363 67.2
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 9.6e-100 368.6 513 49.1
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 2.8e-99 367.1 356 67.4
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 6.2e-99 365.9 361 63.2
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 1.8e-98 364.4 386 61.1
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 1.2e-97 361.7 370 62.2
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 2.6e-97 360.5 512 52.0
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 7.6e-97 359.0 379 62.3
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 2.9e-96 357.1 367 60.2
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 3.8e-96 356.7 328 73.8
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 4.9e-96 356.3 368 66.6
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 4.9e-96 356.3 355 66.2
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 1.1e-95 355.1 355 62.0
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 1.1e-95 355.1 367 67.6
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.7e-94 350.5 360 63.1
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 3.5e-94 350.1 370 59.2
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 3.5e-94 350.1 370 59.2
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 4.6e-94 349.7 361 50.7
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 7.8e-94 349.0 350 63.7
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 1.0e-93 348.6 358 65.9
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 3.9e-93 346.7 360 67.2
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 3.9e-93 346.7 351 62.7
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 8.7e-93 345.5 366 63.7
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 1.1e-92 345.1 355 61.1
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 1.5e-92 344.7 370 60.5
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 1.5e-92 344.7 365 49.6
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 3.3e-92 343.6 398 59.3
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 5.6e-92 342.8 370 65.1
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 1.6e-91 341.3 366 62.3
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 3.6e-91 340.1 361 59.0
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 6.2e-91 339.3 389 60.7
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.4e-90 338.2 379 63.1
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 4.0e-90 336.7 367 61.6
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.5e-89 334.7 362 63.0
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 1.5e-89 334.7 319 65.8
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 2.0e-89 334.3 361 63.4
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 9.9e-89 332.0 327 66.7
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.1e-86 324.3 347 62.2
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.1e-86 324.3 347 62.2
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 2.1e-86 324.3 361 60.9
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 4.6e-86 323.2 319 64.9
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 1.5e-84 318.2 345 62.3
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 3.3e-84 317.0 362 58.8
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 4.8e-83 313.2 372 55.9
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 8.1e-83 312.4 305 65.2
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 1.6e-62 245.0 190 60.0
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 1.3e-51 208.8 134 70.1
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 5.7e-44 183.3 191 48.7
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 1.2e-38 165.6 372 40.1
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 2.1e-38 164.9 281 38.8
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 1.1e-34 152.5 385 41.6
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 8.8e-29 132.9 130 53.8
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 1.5e-28 132.1 375 42.7
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 6.1e-22 110.2 104 53.8
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 3.4e-20 104.4 156 36.5
AT5G14350 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 3.3e-15 87.8 127 47.2
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 1.4e-13 82.4 47 72.3


User provided reference genes

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