Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 5.8e-275 950.3 478 100.0
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 7.5e-267 923.3 479 97.7
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 1.4e-257 892.5 529 88.1
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 7.1e-257 890.2 519 89.0
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 3.6e-253 877.9 480 93.8
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 2.8e-237 825.1 478 87.2
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 2.8e-229 798.5 482 84.2
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 1.3e-226 789.6 478 83.1
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 5.7e-222 774.2 487 80.7
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 9.6e-222 773.5 478 82.6
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 1.1e-220 770.0 468 84.6
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 1.7e-186 656.4 468 70.3
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 2.2e-181 639.4 478 67.4
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 1.3e-149 533.9 479 56.6
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 6.4e-149 531.6 474 55.3
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 4.1e-148 528.9 473 56.7
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 1.0e-146 524.2 474 54.4
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 8.6e-146 521.2 475 55.8
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 9.5e-145 517.7 471 55.0
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 6.8e-143 511.5 474 54.6
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 3.4e-142 509.2 474 55.1
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 1.1e-140 504.2 474 53.6
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 2.3e-138 496.5 470 52.8
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 3.0e-138 496.1 477 53.7
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 6.6e-138 495.0 485 53.4
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 1.5e-137 493.8 470 52.6
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 1.9e-137 493.4 468 52.4
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 2.5e-137 493.0 468 52.1
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 1.2e-136 490.7 469 53.1
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 3.1e-135 486.1 473 51.2
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 5.2e-135 485.3 477 53.2
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 1.2e-134 484.2 477 52.2
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 1.5e-134 483.8 477 52.2
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 2.2e-133 479.9 479 50.9
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 4.9e-133 478.8 480 51.7
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 1.4e-132 477.2 465 51.8
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 1.9e-132 476.9 477 52.0
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 3.5e-131 472.6 469 49.9
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 3.9e-130 469.2 499 48.9
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 5.1e-130 468.8 506 50.4
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 6.6e-130 468.4 478 50.8
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 1.1e-129 467.6 462 51.7
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 1.5e-129 467.2 475 49.5
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 2.1e-128 463.4 471 51.2
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 3.6e-128 462.6 472 49.2
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 6.2e-128 461.8 506 48.2
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 1.4e-127 460.7 483 50.7
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 1.4e-127 460.7 471 47.8
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 1.8e-127 460.3 479 49.1
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 3.1e-127 459.5 472 47.9
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 4.0e-127 459.1 469 52.2
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 1.2e-126 457.6 477 50.3
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 1.5e-126 457.2 477 49.5
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 3.8e-125 452.6 481 49.9
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 8.4e-125 451.4 478 50.6
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 9.3e-124 448.0 520 46.0
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 1.6e-123 447.2 480 50.0
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 2.7e-123 446.4 459 48.1
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 2.5e-121 439.9 474 48.1
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 6.4e-117 425.2 534 45.9
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 8.4e-117 424.9 481 46.8
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 2.1e-115 420.2 381 53.8
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 6.0e-115 418.7 476 47.3
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 6.0e-115 418.7 485 47.2
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 9.6e-113 411.4 469 45.4
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 1.3e-112 411.0 500 46.0
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 1.1e-111 407.9 477 46.1
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 5.3e-111 405.6 509 42.4
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 5.3e-111 405.6 385 53.5
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 5.8e-110 402.1 387 51.4
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 7.6e-110 401.7 483 47.2
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 3.8e-109 399.4 489 47.2
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 6.0e-107 392.1 568 41.4
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 3.0e-106 389.8 521 44.1
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 1.9e-105 387.1 480 45.8
AUR62000087 Chenopodium quinoa HOM05D006389 ORTHO05D007863 3.1e-103 379.8 470 44.7
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 3.1e-103 379.8 465 45.6
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 7.6e-102 375.2 386 50.0
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 2.1e-99 367.1 370 50.3
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 3.6e-99 366.3 438 46.3
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 3.6e-99 366.3 509 40.3
MELO3C015208.2 Cucumis melo HOM05D006389 ORTHO05D007863 9.0e-95 351.7 461 43.0
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 1.0e-93 348.2 477 43.0
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 9.4e-92 341.7 500 40.4
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 5.7e-89 332.4 329 48.3
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 1.4e-87 327.8 480 39.0
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 1.9e-84 317.4 326 46.3
HanXRQChr14g0455041 Helianthus annuus HOM05D006389 ORTHO05D007863 7.2e-84 315.5 311 52.1
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 1.1e-79 301.6 481 37.4
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 2.6e-78 297.0 257 56.4
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 5.9e-70 269.2 493 35.3
Ca_20580_v3 Cicer arietinum L. HOM05D006389 ORTHO05D007863 5.0e-69 266.2 326 46.6
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 1.4e-66 258.1 282 44.7
Nitab4.5_0000175g0150 Nicotiana tabacum HOM05D006389 ORTHO05D007863 6.8e-66 255.8 293 44.7
Solyc11g045510.3 Solanum lycopersicum HOM05D006389 ORTHO05D007863 7.5e-65 252.3 288 44.4
PSO384G2577 Papaver somniferum HOM05D006389 ORTHO05D007863 3.1e-63 246.9 278 43.9
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 1.6e-59 234.6 506 30.8
MSTRG.17573 Avicennia marina HOM05D006389 ORTHO05D007863 5.4e-55 219.5 190 57.4
Ciclev10018279m.g Citrus clementina HOM05D006389 ORTHO05D007863 6.6e-53 212.6 173 60.7
CSS0004435 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 1.4e-50 204.9 306 39.9
AagrBONN_evm.TU.Sc2ySwM_228.3166 Anthoceros agrestis HOM05D006389 ORTHO05D007863 1.1e-47 195.3 448 31.9
Ciclev10016567m.g Citrus clementina HOM05D006389 ORTHO05D007863 1.1e-47 195.3 229 46.3
MBI01_g14331_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 2.0e-46 191.0 157 57.3
Hma1.2p1_0728F.1_g209340 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 3.9e-45 186.8 189 51.3
Peaxi162Scf00559g00114 Petunia axillaris HOM05D006389 ORTHO05D007863 8.9e-42 175.6 190 43.7
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 1.1e-36 158.7 186 44.1
Lj1A361T11 Lonicera japonica HOM05D006389 ORTHO05D007863 7.5e-33 146.0 166 46.4
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 2.4e-31 141.0 371 27.0
Nitab4.5_0000175g0160 Nicotiana tabacum HOM05D006389 ORTHO05D007863 7.3e-28 129.4 149 45.0
HanXRQChr14g0450961 Helianthus annuus HOM05D006389 ORTHO05D007863 7.6e-25 119.4 191 36.1
SHI30507 Sapria himalayana HOM05D006389 ORTHO05D007863 3.0e-21 107.5 91 58.2
CSS0015492 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 3.3e-20 104.0 90 54.4
arahy.Tifrunner.gnm1.ann1.RII35Q Arachis hypogaea HOM05D006389 ORTHO05D007863 4.0e-18 97.1 285 31.2
Psat4g014880 Pisum sativum HOM05D006389 ORTHO05D007863 4.4e-17 93.6 151 40.4
MCO05G648 Micromonas commoda HOM05D006389 ORTHO05D007863 1.6e-14 85.1 362 26.5
Peaxi162Scf00185g00310 Petunia axillaris HOM05D006389 ORTHO05D007863 3.5e-14 84.0 132 38.6
HanXRQChr13g0389161 Helianthus annuus HOM05D006389 ORTHO05D007863 4.6e-14 83.6 53 67.9
vmacro04177 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 6.2e-11 73.2 78 47.4
SEGI_20259 Sequoiadendron giganteum HOM05D006389 ORTHO05D007863 4.9e-08 63.5 71 42.3
MBI01_g14332_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 1.1e-07 62.4 95 37.9


User provided reference genes

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