Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p39940 Brassica napus HOM05D004632 ORTHO05D005556 1.3e-253 879.8 667 100.0
BraA02t08956Z Brassica rapa HOM05D004632 ORTHO05D005556 4.7e-251 871.3 667 99.3
BolC2t12041H Brassica oleracea HOM05D004632 ORTHO05D005556 7.3e-244 847.4 667 94.2
C02p59830 Brassica napus HOM05D004632 ORTHO05D005556 9.6e-236 820.5 667 92.4
Sp2g22380 Schrenkiella parvula HOM05D004632 ORTHO05D005556 1.8e-226 789.6 670 92.7
BolC9t53613H Brassica oleracea HOM05D004632 ORTHO05D005556 1.2e-225 786.9 670 88.7
BraA09t36273Z Brassica rapa HOM05D004632 ORTHO05D005556 4.5e-225 785.0 670 88.5
A09p06280 Brassica napus HOM05D004632 ORTHO05D005556 1.0e-224 783.9 670 88.4
BcaB04g19812 Brassica carinata HOM05D004632 ORTHO05D005556 6.5e-224 781.2 672 88.7
C09p06950 Brassica napus HOM05D004632 ORTHO05D005556 5.5e-223 778.1 670 88.1
BcaC04g23574 Brassica carinata HOM05D004632 ORTHO05D005556 1.2e-222 776.9 670 88.1
Thhalv10003767m.g Eutrema salsugineum HOM05D004632 ORTHO05D005556 1.1e-220 770.4 671 91.2
AT5G25150 Arabidopsis thaliana HOM05D004632 ORTHO05D005556 2.0e-217 759.6 671 90.2
BcaC03g17924 Brassica carinata HOM05D004632 ORTHO05D005556 1.4e-215 753.4 667 92.1
Carub.0006s2297 Capsella rubella HOM05D004632 ORTHO05D005556 1.0e-213 747.3 670 89.6
CARHR188340 Cardamine hirsuta HOM05D004632 ORTHO05D005556 4.7e-198 695.3 456 83.8
THA.LOC104814991 Tarenaya hassleriana HOM05D004632 ORTHO05D005556 3.3e-196 689.1 680 80.9
AL6G36810 Arabidopsis lyrata HOM05D004632 ORTHO05D005556 6.3e-195 684.9 672 86.0
BcaB07g29936 Brassica carinata HOM05D004632 ORTHO05D005556 1.1e-194 684.1 452 80.5
Aa31LG11G4400 Aethionema arabicum HOM05D004632 ORTHO05D005556 1.1e-191 674.1 661 84.7
Cpa.g.sc127.22 Carica papaya HOM05D004632 ORTHO05D005556 1.7e-171 607.1 459 67.8
Duzib168G2284 Durio zibethinus HOM05D004632 ORTHO05D005556 1.6e-166 590.5 667 75.3
Ciclev10007613m.g Citrus clementina HOM05D004632 ORTHO05D005556 4.0e-165 585.9 673 75.2
Dinv34967 Davidia involucrata HOM05D004632 ORTHO05D005556 3.4e-164 582.8 672 74.6
CsaV3_4G036640 Cucumis sativus L. HOM05D004632 ORTHO05D005556 4.4e-164 582.4 674 73.0
Psat5g032640 Pisum sativum HOM05D004632 ORTHO05D005556 5.7e-164 582.0 670 73.0
Gorai.001G037500 Gossypium raimondii HOM05D004632 ORTHO05D005556 9.8e-164 581.3 667 78.4
Prupe.1G392800 Prunus persica HOM05D004632 ORTHO05D005556 2.2e-163 580.1 672 73.5
Aqoxy7G03810 Aquilegia oxysepala HOM05D004632 ORTHO05D005556 4.9e-163 578.9 670 74.0
MELO3C016968.2 Cucumis melo HOM05D004632 ORTHO05D005556 4.9e-163 578.9 674 73.0
Gohir.A07G031900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 1.4e-162 577.4 667 78.0
Gohir.D07G035600 Gossypium hirsutum HOM05D004632 ORTHO05D005556 2.4e-162 576.6 667 78.0
Potri.018G020200 Populus trichocarpa HOM05D004632 ORTHO05D005556 2.4e-162 576.6 674 72.6
Medtr3g106080 Medicago truncatula HOM05D004632 ORTHO05D005556 5.4e-162 575.5 670 72.7
GSVIVG01035887001 Vitis vinifera HOM05D004632 ORTHO05D005556 5.4e-162 575.5 675 73.6
Sed0004025 Sechium edule HOM05D004632 ORTHO05D005556 1.6e-161 573.9 674 72.8
Lj1g0022186 Lotus japonicus HOM05D004632 ORTHO05D005556 4.6e-161 572.4 669 72.0
Phvul.009G087600 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 5.9e-161 572.0 671 72.3
Glyma.06G062300 Glycine max HOM05D004632 ORTHO05D005556 7.8e-161 571.6 665 72.6
Gohir.A05G058900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 7.8e-161 571.6 451 66.1
RcHm_v2.0_Chr6g0299541 Rosa chinensis HOM05D004632 ORTHO05D005556 7.8e-161 571.6 671 73.9
TWI32G0830 Tripterygium wilfordii HOM05D004632 ORTHO05D005556 1.0e-160 571.2 675 72.4
VMungo1309G0882 Vigna mungo HOM05D004632 ORTHO05D005556 1.0e-160 571.2 670 72.5
Ca_15774_v3 Cicer arietinum L. HOM05D004632 ORTHO05D005556 1.3e-160 570.9 671 72.7
Manes.16G128700 Manihot esculenta HOM05D004632 ORTHO05D005556 6.6e-160 568.5 671 73.3
FvH4_2g41020 Fragaria vesca HOM05D004632 ORTHO05D005556 1.1e-159 567.8 669 72.8
Potri.006G263400 Populus trichocarpa HOM05D004632 ORTHO05D005556 1.1e-159 567.8 674 72.4
TPR.G1835 Trifolium pratense HOM05D004632 ORTHO05D005556 1.5e-159 567.4 670 72.4
MD00G1143300 Malus domestica HOM05D004632 ORTHO05D005556 2.5e-159 566.6 463 64.6
arahy.Tifrunner.gnm1.ann1.8PBG0P Arachis hypogaea HOM05D004632 ORTHO05D005556 5.6e-159 565.5 669 72.3
PSO782G2171 Papaver somniferum HOM05D004632 ORTHO05D005556 3.6e-158 562.8 671 72.1
CSS0008139 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 1.0e-157 561.2 671 73.0
Peaxi162Scf00430g00519 Petunia axillaris HOM05D004632 ORTHO05D005556 2.3e-157 560.1 673 73.7
Sabra06G0205900 Salix brachista HOM05D004632 ORTHO05D005556 4.0e-157 559.3 671 72.4
Rhsim02G0214000 Rhododendron simsii HOM05D004632 ORTHO05D005556 6.8e-157 558.5 671 73.2
CiPaw.07G229300 Carya illinoinensis HOM05D004632 ORTHO05D005556 1.2e-156 557.8 679 72.3
Atru.chr7.2537 Acer truncatum HOM05D004632 ORTHO05D005556 1.5e-156 557.4 678 71.7
CAN.G199.61 Capsicum annuum HOM05D004632 ORTHO05D005556 1.5e-156 557.4 672 72.8
ClCG05G016370 Citrullus lanatus HOM05D004632 ORTHO05D005556 2.6e-156 556.6 681 71.5
PSO063G4867 Papaver somniferum HOM05D004632 ORTHO05D005556 3.4e-156 556.2 672 71.9
Glyma.04G061600 Glycine max HOM05D004632 ORTHO05D005556 4.4e-156 555.8 671 71.8
Cc09_g08590 Coffea canephora HOM05D004632 ORTHO05D005556 1.3e-155 554.3 673 72.2
FAN20G0152 Fragaria x ananassa HOM05D004632 ORTHO05D005556 1.3e-155 554.3 685 71.1
FAN20G1191 Fragaria x ananassa HOM05D004632 ORTHO05D005556 1.7e-155 553.9 686 71.0
Lalb_Chr23g0268241 Lupinus albus HOM05D004632 ORTHO05D005556 2.2e-155 553.5 671 72.1
arahy.Tifrunner.gnm1.ann1.21LKMJ Arachis hypogaea HOM05D004632 ORTHO05D005556 8.3e-155 551.6 460 63.0
FAN27G1200 Fragaria x ananassa HOM05D004632 ORTHO05D005556 1.9e-154 550.4 460 63.0
HanXRQChr03g0084861 Helianthus annuus HOM05D004632 ORTHO05D005556 5.4e-154 548.9 666 72.5
Sopen06g024220 Solanum pennellii HOM05D004632 ORTHO05D005556 3.5e-153 546.2 467 63.0
Actinidia22297 Actinidia chinensis HOM05D004632 ORTHO05D005556 4.6e-153 545.8 670 71.6
Nn8g39852 Nelumbo nucifera HOM05D004632 ORTHO05D005556 1.7e-152 543.9 671 70.5
MBI15_g05236_MAGBIO Magnolia biondii HOM05D004632 ORTHO05D005556 5.0e-152 542.3 460 62.2
Solyc06g065700.3 Solanum lycopersicum HOM05D004632 ORTHO05D005556 5.0e-152 542.3 467 62.5
EL10Ac1g00704 Beta vulgaris HOM05D004632 ORTHO05D005556 8.6e-152 541.6 680 67.9
ECA240G3507 Erigeron canadensis HOM05D004632 ORTHO05D005556 3.3e-151 539.7 669 71.6
PGR042G1415 Punica granatum HOM05D004632 ORTHO05D005556 1.2e-150 537.7 668 71.4
Lsat_1_v5_gn_6_77900 Lactuca sativa HOM05D004632 ORTHO05D005556 4.7e-150 535.8 459 62.1
DCAR_015265 Daucus carota HOM05D004632 ORTHO05D005556 1.4e-149 534.3 464 60.3
Lsat_1_v5_gn_7_4261 Lactuca sativa HOM05D004632 ORTHO05D005556 1.2e-148 531.2 456 61.6
ATR0739G094 Amborella trichopoda HOM05D004632 ORTHO05D005556 7.5e-148 528.5 676 70.3
Migut.N00603 Erythranthe guttata HOM05D004632 ORTHO05D005556 1.3e-147 527.7 670 69.6
MSTRG.9370 Avicennia marina HOM05D004632 ORTHO05D005556 3.2e-146 523.1 673 68.9
Eucgr.C02661 Eucalyptus grandis HOM05D004632 ORTHO05D005556 1.5e-143 514.2 479 59.5
Lj7A732T26 Lonicera japonica HOM05D004632 ORTHO05D005556 2.1e-142 510.4 655 67.0
SGA_v2.0_scaffold40G15680 Striga asiatica HOM05D004632 ORTHO05D005556 8.1e-142 508.4 710 66.9
VMungo0647G2075 Vigna mungo HOM05D004632 ORTHO05D005556 1.1e-141 508.1 460 58.3
HPP92_014401 Vanilla planifolia HOM05D004632 ORTHO05D005556 6.8e-141 505.4 460 58.7
Ah.05g177560 Amaranthus hybridus HOM05D004632 ORTHO05D005556 2.0e-140 503.8 477 58.1
Phvul.001G042300 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 7.6e-140 501.9 460 58.3
Glyma.17G222200 Glycine max HOM05D004632 ORTHO05D005556 1.7e-139 500.7 460 58.5
MSTRG.4644 Avicennia marina HOM05D004632 ORTHO05D005556 1.1e-138 498.0 670 67.6
Thecc.09G016800 Theobroma cacao HOM05D004632 ORTHO05D005556 4.1e-138 496.1 570 78.8
Haze_21427 Corylus avellana HOM05D004632 ORTHO05D005556 1.6e-137 494.2 458 64.0
CDE05G3472 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 4.6e-137 492.7 461 56.6
Os06g0649500 Oryza sativa ssp. japonica HOM05D004632 ORTHO05D005556 1.3e-136 491.1 460 56.3
Nitab4.5_0007182g0050 Nicotiana tabacum HOM05D004632 ORTHO05D005556 3.0e-136 490.0 455 60.0
AUR62013801 Chenopodium quinoa HOM05D004632 ORTHO05D005556 7.6e-132 475.3 615 67.5
CSS0046974 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 1.7e-131 474.2 406 63.8
Nitab4.5_0003976g0020 Nicotiana tabacum HOM05D004632 ORTHO05D005556 6.6e-128 462.2 728 60.3
AUR62023356 Chenopodium quinoa HOM05D004632 ORTHO05D005556 1.3e-126 458.0 673 62.3
SalBow1G2567 Salvia bowleyana HOM05D004632 ORTHO05D005556 1.8e-125 454.1 386 61.1
vmacro11252 Vaccinium macrocarpon HOM05D004632 ORTHO05D005556 2.4e-125 453.8 360 66.7
Hund27424 Selenicereus undatus HOM05D004632 ORTHO05D005556 1.5e-119 434.5 590 45.1
TAR626G1191 Trochodendron aralioides HOM05D004632 ORTHO05D005556 1.8e-117 427.6 566 74.6
Mapoly0009s0169 Marchantia polymorpha HOM05D004632 ORTHO05D005556 1.1e-114 418.3 688 62.9
Pp3c12_23330 Physcomitrium patens HOM05D004632 ORTHO05D005556 7.1e-114 415.6 466 49.1
Zm00001eb388650 Zea mays HOM05D004632 ORTHO05D005556 2.1e-113 414.1 575 71.0
Gohir.D05G060932 Gossypium hirsutum HOM05D004632 ORTHO05D005556 1.8e-109 401.0 420 55.0
SMO118G0104 Selaginella moellendorffii HOM05D004632 ORTHO05D005556 1.2e-105 388.3 400 52.2
Oeu061252.3 Olea europaea HOM05D004632 ORTHO05D005556 4.6e-105 386.3 708 60.2
TAR625G0176 Trochodendron aralioides HOM05D004632 ORTHO05D005556 8.7e-104 382.1 351 60.1
MD15G1039100 Malus domestica HOM05D004632 ORTHO05D005556 4.1e-93 346.7 319 58.0
CSS0042581 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 5.3e-93 346.3 294 64.3
Oeu013659.1 Olea europaea HOM05D004632 ORTHO05D005556 2.2e-86 324.3 282 63.1
Actinidia13189 Actinidia chinensis HOM05D004632 ORTHO05D005556 9.1e-69 265.8 504 66.1
PRCOL_00000651 Prasinoderma coloniale HOM05D004632 ORTHO05D005556 2.2e-59 234.6 456 31.8
COL.COLO4_18941 Corchorus olitorius HOM05D004632 ORTHO05D005556 3.8e-59 233.8 392 40.6
Zm00001eb259920 Zea mays HOM05D004632 ORTHO05D005556 3.2e-58 230.7 194 65.5
MCO11G306 Micromonas commoda HOM05D004632 ORTHO05D005556 3.5e-52 210.7 486 35.6
MD15G1039000 Malus domestica HOM05D004632 ORTHO05D005556 1.0e-51 209.1 148 71.6
CBR_g41144 Chara braunii HOM05D004632 ORTHO05D005556 1.0e-48 199.1 193 48.7
Sed0017212 Sechium edule HOM05D004632 ORTHO05D005556 1.4e-48 198.7 338 38.2
SEGI_13945 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 1.8e-45 188.3 167 53.9
MCO11G293 Micromonas commoda HOM05D004632 ORTHO05D005556 2.4e-45 188.0 535 32.7
VMungo1309G1582 Vigna mungo HOM05D004632 ORTHO05D005556 2.5e-42 177.9 144 67.4
CDE05G1210 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 5.6e-42 176.8 116 72.4
Dinv40981 Davidia involucrata HOM05D004632 ORTHO05D005556 5.6e-42 176.8 276 43.8
CDE05G3588 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 2.5e-34 151.4 130 59.2
AagrBONN_evm.TU.Sc2ySwM_228.3176 Anthoceros agrestis HOM05D003428 ORTHO05D004131 3.3e-34 151.0 154 51.3
CBR_g39739 Chara braunii HOM05D004632 ORTHO05D005556 2.8e-33 147.9 306 39.2
SEGI_28232 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 4.7e-33 147.1 157 54.8
Manes.03G009801 Manihot esculenta HOM05D004632 ORTHO05D005556 3.1e-32 144.4 294 36.7
Actinidia10511 Actinidia chinensis HOM05D004632 ORTHO05D005556 1.5e-31 142.1 136 58.8
PSO541G0014 Papaver somniferum HOM05D004632 ORTHO05D005556 1.4e-29 135.6 125 55.2
Hma1.2p1_0059F.1_g032640 Hydrangea macrophylla HOM05D004632 ORTHO05D005556 9.2e-21 106.3 293 84.6
Cre12.g526950 Chlamydomonas reinhardtii HOM05D004632 ORTHO05D005556 2.5e-18 98.2 455 25.9
Actinidia09762 Actinidia chinensis HOM05D004632 ORTHO05D005556 3.3e-18 97.8 66 69.7
SEGI_30848 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 8.1e-17 93.2 73 58.9
Glyma.14G103500 Glycine max HOM05D004632 ORTHO05D005556 1.8e-16 92.0 114 45.6
SEGI_29407 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 2.4e-16 91.7 79 55.7
Sabra18G0022500 Salix brachista HOM05D004632 ORTHO05D005556 5.8e-15 87.0 293 31.4
Cfa022837 Carpinus fangiana HOM05D004632 ORTHO05D005556 1.1e-13 82.8 490 20.8
Haze_26425 Corylus avellana HOM05D004632 ORTHO05D005556 1.1e-10 72.8 140 34.3
Actinidia10512 Actinidia chinensis HOM05D004632 ORTHO05D005556 1.6e-09 68.9 85 44.7
FAN15G3250 Fragaria x ananassa HOM05D004632 ORTHO05D005556 6.2e-09 67.0 50 68.0
MD15G1038900 Malus domestica HOM05D004632 ORTHO05D005556 1.8e-08 65.5 50 66.0
Glyma.14G103600 Glycine max HOM05D004632 ORTHO05D005556 4.0e-08 64.3 47 66.0
SEGI_21073 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 4.0e-08 64.3 49 65.3


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