Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p39720 Brassica napus HOM05D008662 ORTHO05D010843 5.1e-159 564.3 272 100.0
BraA02t08937Z Brassica rapa HOM05D008662 ORTHO05D010843 8.1e-157 557.0 276 98.2
C02p59500 Brassica napus HOM05D008662 ORTHO05D010843 1.1e-145 520.0 275 93.5
BolC2t12013H Brassica oleracea HOM05D008662 ORTHO05D010843 2.7e-144 515.4 278 92.1
Sp2g22060 Schrenkiella parvula HOM05D008662 ORTHO05D010843 1.4e-100 370.2 276 65.6
BraA06t26539Z Brassica rapa HOM05D008662 ORTHO05D010843 2.3e-95 352.8 280 64.6
C07p42350 Brassica napus HOM05D008662 ORTHO05D010843 3.9e-95 352.1 281 64.4
A06p36170 Brassica napus HOM05D008662 ORTHO05D010843 4.4e-94 348.6 274 64.2
Thhalv10004752m.g Eutrema salsugineum HOM05D008662 ORTHO05D010843 4.4e-94 348.6 279 63.4
BraA09t36259Z Brassica rapa HOM05D008662 ORTHO05D010843 3.7e-93 345.5 313 57.8
BolC7t44763H Brassica oleracea HOM05D005914 ORTHO05D007361 4.8e-93 345.1 272 64.7
BcaB07g32200 Brassica carinata HOM05D008662 ORTHO05D010843 1.4e-84 317.0 215 77.2
AL6G37260 Arabidopsis lyrata HOM05D008662 ORTHO05D010843 1.7e-82 310.1 281 58.4
AT5G25470 Arabidopsis thaliana HOM05D008662 ORTHO05D010843 8.5e-82 307.8 275 58.2
Sp3g16060 Schrenkiella parvula HOM05D008662 ORTHO05D010843 4.2e-81 305.4 269 58.4
AL6G37270 Arabidopsis lyrata HOM05D008662 ORTHO05D010843 1.3e-77 293.9 282 54.6
AT5G25475 Arabidopsis thaliana HOM05D008662 ORTHO05D010843 4.8e-77 292.0 282 53.5
CARHR187920 Cardamine hirsuta HOM05D008662 ORTHO05D010843 7.7e-75 284.6 274 54.7
C03p49300 Brassica napus HOM05D008662 ORTHO05D010843 1.7e-74 283.5 270 54.1
Thhalv10021356m.g Eutrema salsugineum HOM05D008662 ORTHO05D010843 2.9e-74 282.7 267 56.6
BolC3t17219H Brassica oleracea HOM05D008662 ORTHO05D010843 3.8e-74 282.3 279 51.6
Carub.0006s2333 Capsella rubella HOM05D008662 ORTHO05D010843 5.0e-74 282.0 275 52.4
BraA01t03711Z Brassica rapa HOM05D008662 ORTHO05D010843 8.5e-74 281.2 269 55.0
BraA03t13204Z Brassica rapa HOM05D008662 ORTHO05D010843 8.5e-74 281.2 272 53.7
A03p40460 Brassica napus HOM05D008662 ORTHO05D010843 1.5e-73 280.4 272 53.3
BcaC01g03721 Brassica carinata HOM05D008662 ORTHO05D010843 1.9e-73 280.0 280 52.1
A01p36470 Brassica napus HOM05D008662 ORTHO05D010843 2.5e-73 279.6 269 54.6
BcaB04g18973 Brassica carinata HOM05D008662 ORTHO05D010843 4.2e-73 278.9 264 53.4
C01p46230 Brassica napus HOM05D008662 ORTHO05D010843 4.7e-72 275.4 269 53.5
BolC1t04584H Brassica oleracea HOM05D008662 ORTHO05D010843 4.7e-72 275.4 269 53.5
BcaC09g48756 Brassica carinata HOM05D008662 ORTHO05D010843 6.1e-72 275.0 268 53.7
BcaC05g28732 Brassica carinata HOM05D008662 ORTHO05D010843 2.3e-71 273.1 256 57.0
A05p31860 Brassica napus HOM05D008662 ORTHO05D010843 3.0e-71 272.7 256 55.1
Carub.0006s2332 Capsella rubella HOM05D008662 ORTHO05D010843 6.8e-71 271.6 278 52.9
BraA05t22018Z Brassica rapa HOM05D008662 ORTHO05D010843 1.2e-70 270.8 263 53.6
C05p48350 Brassica napus HOM05D008662 ORTHO05D010843 1.5e-70 270.4 256 56.6
BcaB06g25856 Brassica carinata HOM05D008662 ORTHO05D010843 2.8e-69 266.2 266 53.8
BolC5t33569H Brassica oleracea HOM05D008662 ORTHO05D010843 2.5e-65 253.1 295 47.8
BcaB04g20805 Brassica carinata HOM05D008662 ORTHO05D010843 1.5e-62 243.8 246 52.8
Aa31LG11G4850 Aethionema arabicum HOM05D005914 ORTHO05D007361 2.5e-57 226.5 278 46.8
BcaB04g19788 Brassica carinata HOM05D008662 ORTHO05D010843 1.7e-42 177.2 127 66.1
BcaNung02264 Brassica carinata HOM05D008662 ORTHO05D010843 8.1e-40 168.3 121 67.8
C07p42410 Brassica napus HOM05D008662 ORTHO05D010843 5.2e-39 165.6 121 66.1
BolC7t44768H Brassica oleracea HOM05D008662 ORTHO05D010843 5.2e-39 165.6 121 66.1
CARHR000030 Cardamine hirsuta HOM05D008662 ORTHO05D010843 3.1e-31 139.8 129 55.8
CARHR187960 Cardamine hirsuta HOM05D008662 ORTHO05D010843 1.7e-29 134.0 94 64.9
BcaB04g20807 Brassica carinata HOM05D008662 ORTHO05D010843 1.2e-27 127.9 123 50.4
CARHR292350 Cardamine hirsuta HOM05D008662 ORTHO05D010843 1.6e-16 90.9 63 66.7
THA.LOC104819596 Tarenaya hassleriana HOM05D007600 ORTHO05D009132 9.9e-14 81.6 107 37.4
THA.LOC104807340 Tarenaya hassleriana HOM05D006628 ORTHO05D000088 1.3e-13 81.3 286 23.8
Aa31LG7G14390 Aethionema arabicum HOM05D006628 ORTHO05D000088 1.7e-13 80.9 277 24.2
C07p60560 Brassica napus HOM05D006628 ORTHO05D000088 1.7e-13 80.9 123 33.3
BolC7t46487H Brassica oleracea HOM05D006628 ORTHO05D000088 1.7e-13 80.9 123 33.3
Sp6g26220 Schrenkiella parvula HOM05D007600 ORTHO05D009132 6.4e-13 79.0 115 35.7
AL6G29100 Arabidopsis lyrata HOM05D007600 ORTHO05D009132 1.1e-12 78.2 115 37.4
A03p62870 Brassica napus HOM05D006628 ORTHO05D000088 1.1e-12 78.2 123 32.5
BraA03t15364Z Brassica rapa HOM05D006628 ORTHO05D000088 1.1e-12 78.2 123 32.5
THA.LOC104807272 Tarenaya hassleriana HOM05D006628 ORTHO05D000088 1.1e-12 78.2 261 24.1
BcaB08g36708 Brassica carinata HOM05D007600 ORTHO05D009132 1.4e-12 77.8 113 35.4
AL6G29290 Arabidopsis lyrata HOM05D007600 ORTHO05D009132 1.9e-12 77.4 112 36.6
C09p58890 Brassica napus HOM05D007600 ORTHO05D009132 1.9e-12 77.4 116 36.2
Sp1g09320 Schrenkiella parvula HOM05D007600 ORTHO05D009132 3.2e-12 76.6 122 35.2
BcaC03g13563 Brassica carinata HOM05D007600 ORTHO05D009132 4.2e-12 76.3 115 35.7
C02p09570 Brassica napus HOM05D007600 ORTHO05D009132 4.2e-12 76.3 115 35.7
BolC2t06864H Brassica oleracea HOM05D007600 ORTHO05D009132 4.2e-12 76.3 115 34.8
Thhalv10014143m.g Eutrema salsugineum HOM05D007600 ORTHO05D009132 5.5e-12 75.9 138 31.9
BcaB05g23317 Brassica carinata HOM05D007600 ORTHO05D009132 7.1e-12 75.5 115 34.8
BcaC09g51730 Brassica carinata HOM05D006628 ORTHO05D000088 9.3e-12 75.1 121 35.5
BraA02t05424Z Brassica rapa HOM05D007600 ORTHO05D009132 9.3e-12 75.1 115 34.8
Thhalv10015705m.g Eutrema salsugineum HOM05D007600 ORTHO05D009132 9.3e-12 75.1 115 34.8
BcaB04g18922 Brassica carinata HOM05D007600 ORTHO05D009132 1.2e-11 74.7 104 36.5
AL457U10020 Arabidopsis lyrata HOM05D007600 ORTHO05D009132 1.6e-11 74.3 130 33.8
A02p04630 Brassica napus HOM05D007600 ORTHO05D009132 1.6e-11 74.3 115 34.8
Thhalv10026054m.g Eutrema salsugineum HOM05D006628 ORTHO05D000088 2.1e-11 73.9 110 34.5
Sp6g26290 Schrenkiella parvula HOM05D007600 ORTHO05D009132 2.7e-11 73.6 89 39.3
AT5G18000 Arabidopsis thaliana HOM05D007600 ORTHO05D009132 3.5e-11 73.2 106 36.8
Carub.0006s1638 Capsella rubella HOM05D007600 ORTHO05D009132 3.5e-11 73.2 115 35.7
A10p21410 Brassica napus HOM05D007600 ORTHO05D009132 4.6e-11 72.8 114 33.3
CARHR195070 Cardamine hirsuta HOM05D007600 ORTHO05D009132 4.6e-11 72.8 115 33.9
Thhalv10028696m.g Eutrema salsugineum HOM05D006628 ORTHO05D000088 4.6e-11 72.8 148 30.4
BraA04t18782Z Brassica rapa HOM05D007600 ORTHO05D009132 7.9e-11 72.0 115 37.4
CARHR092260 Cardamine hirsuta HOM05D007600 ORTHO05D009132 7.9e-11 72.0 117 32.5
Aa31LG11G11510 Aethionema arabicum HOM05D007600 ORTHO05D009132 1.0e-10 71.6 81 38.3
BcaC04g18726 Brassica carinata HOM05D007600 ORTHO05D009132 1.3e-10 71.2 117 35.9
BolC9t58734H Brassica oleracea HOM05D007600 ORTHO05D009132 1.3e-10 71.2 117 35.9
Aa31LG5G11590 Aethionema arabicum HOM05D006628 ORTHO05D000088 1.8e-10 70.9 276 24.6
A04p33230 Brassica napus HOM05D007600 ORTHO05D009132 1.8e-10 70.9 115 36.5
BraA04t18175Z Brassica rapa HOM05D007600 ORTHO05D009132 1.8e-10 70.9 126 30.2
AT4G34400 Arabidopsis thaliana HOM05D006628 ORTHO05D000088 2.3e-10 70.5 118 29.7
BcaC09g51706 Brassica carinata HOM05D006628 ORTHO05D000088 2.3e-10 70.5 261 23.8
BcaB04g18919 Brassica carinata HOM05D007600 ORTHO05D009132 3.0e-10 70.1 84 36.9
Sp7g27330 Schrenkiella parvula HOM05D006628 ORTHO05D000088 3.0e-10 70.1 121 30.6
AT2G35310 Arabidopsis thaliana HOM05D007600 ORTHO05D009132 3.9e-10 69.7 144 31.9
BcaNung01328 Brassica carinata HOM05D006628 ORTHO05D000088 5.1e-10 69.3 117 29.1
BraA10t44204Z Brassica rapa HOM05D007600 ORTHO05D009132 5.1e-10 69.3 125 32.0
AL3G52300 Arabidopsis lyrata HOM05D007600 ORTHO05D009132 6.7e-10 68.9 88 35.2
A08p33850 Brassica napus HOM05D007600 ORTHO05D009132 6.7e-10 68.9 103 34.0
C01p10050 Brassica napus HOM05D006628 ORTHO05D000088 6.7e-10 68.9 143 31.5
BraA08t35300Z Brassica rapa HOM05D007600 ORTHO05D009132 6.7e-10 68.9 103 34.0
Carub.0006s1619 Capsella rubella HOM05D007600 ORTHO05D009132 6.7e-10 68.9 145 31.0
Thhalv10015617m.g Eutrema salsugineum HOM05D007600 ORTHO05D009132 6.7e-10 68.9 115 32.2
Sp6g19410 Schrenkiella parvula HOM05D006628 ORTHO05D000088 6.7e-10 68.9 118 33.1
AT5G18090 Arabidopsis thaliana HOM05D007600 ORTHO05D009132 8.7e-10 68.6 112 33.0
AT5G57720 Arabidopsis thaliana HOM05D006628 ORTHO05D000088 8.7e-10 68.6 297 22.9
A01p08580 Brassica napus HOM05D000106 ORTHO05D000160 8.7e-10 68.6 122 35.2
A01p08840 Brassica napus HOM05D006628 ORTHO05D000088 8.7e-10 68.6 123 34.1
C01p16350 Brassica napus HOM05D006628 ORTHO05D000088 8.7e-10 68.6 125 32.8
BraA01t00809Z Brassica rapa HOM05D006628 ORTHO05D000088 8.7e-10 68.6 122 35.2
BraA01t00831Z Brassica rapa HOM05D006628 ORTHO05D000088 8.7e-10 68.6 123 34.1
BcaB06g25789 Brassica carinata HOM05D007600 ORTHO05D009132 1.1e-09 68.2 104 34.6
BcaC01g03795 Brassica carinata HOM05D007600 ORTHO05D009132 1.1e-09 68.2 104 34.6
BolC1t01586H Brassica oleracea HOM05D006628 ORTHO05D000088 1.1e-09 68.2 125 32.8
BcaC07g38617 Brassica carinata HOM05D007600 ORTHO05D009132 1.5e-09 67.8 103 33.0
A02p08260 Brassica napus HOM05D006628 ORTHO05D000088 1.5e-09 67.8 122 32.0
BraA02t05898Z Brassica rapa HOM05D006628 ORTHO05D000088 1.5e-09 67.8 122 32.0
CARHR271470 Cardamine hirsuta HOM05D006628 ORTHO05D000088 1.5e-09 67.8 251 22.7
A03p40020 Brassica napus HOM05D007600 ORTHO05D009132 1.9e-09 67.4 104 33.7
C03p48550 Brassica napus HOM05D007600 ORTHO05D009132 1.9e-09 67.4 104 33.7
BolC1t00991H Brassica oleracea HOM05D006628 ORTHO05D000088 1.9e-09 67.4 143 30.8
BolC3t17133H Brassica oleracea HOM05D007600 ORTHO05D009132 1.9e-09 67.4 104 33.7
BraA03t13150Z Brassica rapa HOM05D007600 ORTHO05D009132 1.9e-09 67.4 104 33.7
Carub.0007s0593 Capsella rubella HOM05D006628 ORTHO05D000088 1.9e-09 67.4 139 28.1
Sp3g15230 Schrenkiella parvula HOM05D007600 ORTHO05D009132 1.9e-09 67.4 139 28.8
A02p08270 Brassica napus HOM05D006628 ORTHO05D000088 2.5e-09 67.0 117 29.9
BraA02t05899Z Brassica rapa HOM05D006628 ORTHO05D000088 2.5e-09 67.0 117 29.9
Thhalv10001785m.g Eutrema salsugineum HOM05D007600 ORTHO05D009132 2.5e-09 67.0 115 33.9
Aa31LG8G13300 Aethionema arabicum HOM05D007600 ORTHO05D009132 3.3e-09 66.6 108 32.4
BcaB05g22370 Brassica carinata HOM05D006628 ORTHO05D000088 3.3e-09 66.6 120 30.8
BcaNung06129 Brassica carinata HOM05D000765 ORTHO05D000613 3.3e-09 66.6 115 29.6
AT2G16210 Arabidopsis thaliana HOM05D007600 ORTHO05D009132 4.3e-09 66.2 103 34.0
BcaC02g07741 Brassica carinata HOM05D007600 ORTHO05D009132 4.3e-09 66.2 127 29.1
BcaC07g38580 Brassica carinata HOM05D007600 ORTHO05D009132 4.3e-09 66.2 103 31.1
Carub.0003s2950 Capsella rubella HOM05D007600 ORTHO05D009132 4.3e-09 66.2 85 36.5
AT5G09780 Arabidopsis thaliana HOM05D007600 ORTHO05D009132 5.6e-09 65.9 163 31.3
BcaC03g16172 Brassica carinata HOM05D006628 ORTHO05D000088 5.6e-09 65.9 108 32.4
A02p24960 Brassica napus HOM05D006628 ORTHO05D000088 5.6e-09 65.9 108 32.4
A05p32720 Brassica napus HOM05D007600 ORTHO05D009132 5.6e-09 65.9 104 31.7
C02p39080 Brassica napus HOM05D006628 ORTHO05D000088 5.6e-09 65.9 108 32.4
BolC2t09918H Brassica oleracea HOM05D006628 ORTHO05D000088 5.6e-09 65.9 108 32.4
BraA02t07486Z Brassica rapa HOM05D006628 ORTHO05D000088 5.6e-09 65.9 108 32.4
Thhalv10023054m.g Eutrema salsugineum HOM05D007600 ORTHO05D009132 5.6e-09 65.9 83 36.1
BraA05t22094Z Brassica rapa HOM05D007600 ORTHO05D009132 7.4e-09 65.5 104 31.7
AL6G20180 Arabidopsis lyrata HOM05D007600 ORTHO05D009132 9.6e-09 65.1 120 34.2
C02p13950 Brassica napus HOM05D006628 ORTHO05D000088 9.6e-09 65.1 122 31.1
BolC8t49021H Brassica oleracea HOM05D007600 ORTHO05D009132 9.6e-09 65.1 103 31.1
BcaB04g18921 Brassica carinata HOM05D007600 ORTHO05D009132 1.3e-08 64.7 84 35.7
BcaB06g25788 Brassica carinata HOM05D007600 ORTHO05D009132 1.3e-08 64.7 85 36.5
Carub.0006s0819 Capsella rubella HOM05D007600 ORTHO05D009132 1.3e-08 64.7 84 36.9
BcaC01g03796 Brassica carinata HOM05D007600 ORTHO05D009132 1.6e-08 64.3 84 35.7
BcaC03g14130 Brassica carinata HOM05D006628 ORTHO05D000088 1.6e-08 64.3 122 31.1
C03p48540 Brassica napus HOM05D007600 ORTHO05D009132 1.6e-08 64.3 84 35.7
BolC2t07512H Brassica oleracea HOM05D006628 ORTHO05D000088 1.6e-08 64.3 122 31.1
BolC2t07514H Brassica oleracea HOM05D006628 ORTHO05D000088 1.6e-08 64.3 124 30.6
BolC3t17132H Brassica oleracea HOM05D007600 ORTHO05D009132 1.6e-08 64.3 84 35.7
C04p70920 Brassica napus HOM05D007600 ORTHO05D009132 2.1e-08 63.9 115 34.8
C08p13860 Brassica napus HOM05D007600 ORTHO05D009132 2.1e-08 63.9 116 29.3
BolC4t27889H Brassica oleracea HOM05D007600 ORTHO05D009132 2.1e-08 63.9 96 33.3
BolC4t28592H Brassica oleracea HOM05D007600 ORTHO05D009132 2.1e-08 63.9 115 34.8
BolC5t33688H Brassica oleracea HOM05D007600 ORTHO05D009132 2.1e-08 63.9 134 29.1
GSVIVG01031853001 Vitis vinifera HOM05D008110 ORTHO05D005106 2.1e-08 63.9 251 23.5
AL8G33760 Arabidopsis lyrata HOM05D006628 ORTHO05D000088 2.8e-08 63.5 276 23.6
BcaB06g25793 Brassica carinata HOM05D007600 ORTHO05D009132 2.8e-08 63.5 139 28.1
CARHR194980 Cardamine hirsuta HOM05D007600 ORTHO05D009132 2.8e-08 63.5 89 34.8
Thhalv10022138m.g Eutrema salsugineum HOM05D007600 ORTHO05D009132 2.8e-08 63.5 85 32.9
AT3G17010 Arabidopsis thaliana HOM05D007600 ORTHO05D009132 3.7e-08 63.2 112 29.5
A03p40010 Brassica napus HOM05D007600 ORTHO05D009132 4.8e-08 62.8 84 35.7
AL7G16870 Arabidopsis lyrata HOM05D006628 ORTHO05D000088 1.1e-07 61.6 101 28.7
Aa31LG3G13560 Aethionema arabicum HOM05D006628 ORTHO05D000088 1.8e-07 60.8 240 21.2
AL3G29990 Arabidopsis lyrata HOM05D007600 ORTHO05D009132 1.8e-07 60.8 85 30.6
A04p26690 Brassica napus HOM05D007600 ORTHO05D009132 1.8e-07 60.8 83 32.5
C05p49420 Brassica napus HOM05D007600 ORTHO05D009132 1.8e-07 60.8 134 28.4
CARHR106010 Cardamine hirsuta HOM05D007600 ORTHO05D009132 1.8e-07 60.8 99 31.3
Carub.0008s1823 Capsella rubella HOM05D006628 ORTHO05D000088 2.4e-07 60.5 288 22.6
BcaB05g23662 Brassica carinata HOM05D006628 ORTHO05D000088 3.1e-07 60.1 128 29.7
BraA03t13149Z Brassica rapa HOM05D007600 ORTHO05D009132 3.1e-07 60.1 177 26.0
CARHR291980 Cardamine hirsuta HOM05D007600 ORTHO05D009132 3.1e-07 60.1 114 28.1
C04p64110 Brassica napus HOM05D007600 ORTHO05D009132 4.0e-07 59.7 64 37.5
Thhalv10025812m.g Eutrema salsugineum HOM05D006628 ORTHO05D000088 4.0e-07 59.7 138 27.5
BraA01t01293Z Brassica rapa HOM05D006628 ORTHO05D000088 9.0e-07 58.5 114 31.6
BcaC05g28837 Brassica carinata HOM05D007600 ORTHO05D009132 2.0e-06 57.4 85 32.9
BcaB08g36132 Brassica carinata HOM05D006628 ORTHO05D000088 2.6e-06 57.0 119 26.9
Carub.0003s1676 Capsella rubella HOM05D007600 ORTHO05D009132 2.6e-06 57.0 82 31.7
Sp6g02680 Schrenkiella parvula HOM05D006628 ORTHO05D000088 2.6e-06 57.0 144 28.5
CARHR080680 Cardamine hirsuta HOM05D006628 ORTHO05D000088 4.5e-06 56.2 124 28.2
QL10p039053 Quercus lobata HOM05D000395 ORTHO05D000088 5.8e-06 55.8 108 38.0


User provided reference genes

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