Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p39610 Brassica napus HOM05D006435 ORTHO05D008262 4.6e-103 377.9 188 100.0
BraA02t08928Z Brassica rapa HOM05D006435 ORTHO05D008262 1.0e-81 307.0 164 95.1
BcaC03g17897 Brassica carinata HOM05D006435 ORTHO05D008262 1.1e-80 303.5 164 93.9
C02p59390 Brassica napus HOM05D006435 ORTHO05D008262 4.2e-80 301.6 164 93.3
BcaB07g29986 Brassica carinata HOM05D006435 ORTHO05D008262 3.1e-75 285.4 164 88.4
Thhalv10004692m.g Eutrema salsugineum HOM05D006435 ORTHO05D008262 8.6e-65 250.8 164 79.3
Sp2g21890 Schrenkiella parvula HOM05D006435 ORTHO05D008262 8.6e-65 250.8 164 79.3
Aa31LG11G4730 Aethionema arabicum HOM05D006435 ORTHO05D008262 2.0e-58 229.6 165 73.3
AL6G37530 Arabidopsis lyrata HOM05D006435 ORTHO05D008262 6.6e-57 224.6 164 72.6
Carub.0006s2947 Capsella rubella HOM05D006435 ORTHO05D008262 4.0e-54 215.3 161 67.7
CARHR187680 Cardamine hirsuta HOM05D006435 ORTHO05D008262 4.4e-53 211.8 164 69.5
THA.LOC104815054 Tarenaya hassleriana HOM05D006435 ORTHO05D008262 7.0e-43 177.9 167 62.3
AT5G25640 Arabidopsis thaliana HOM05D006435 ORTHO05D008262 4.7e-39 165.2 168 56.5
CiPaw.07G207200 Carya illinoinensis HOM05D006435 ORTHO05D008262 4.0e-38 162.2 161 52.8
Manes.03G062800 Manihot esculenta HOM05D006435 ORTHO05D008262 8.9e-38 161.0 110 67.3
GSVIVG01035670001 Vitis vinifera HOM05D006435 ORTHO05D008262 2.6e-37 159.5 140 55.7
AL6G37520 Arabidopsis lyrata HOM05D006435 ORTHO05D008262 3.4e-37 159.1 168 56.5
CSS0040195 Camellia sinensis var. sinensis HOM05D006435 ORTHO05D008262 5.8e-37 158.3 166 51.2
CANSAT80G2129 Cannabis sativa HOM05D006435 ORTHO05D008262 5.8e-37 158.3 101 70.3
Lsat_1_v5_gn_6_10980 Lactuca sativa HOM05D006435 ORTHO05D008262 9.9e-37 157.5 132 56.8
vmacro11085 Vaccinium macrocarpon HOM05D006435 ORTHO05D008262 9.9e-37 157.5 160 53.1
Atru.chr7.2160 Acer truncatum HOM05D006435 ORTHO05D008262 1.7e-36 156.8 132 59.1
Cfa013344 Carpinus fangiana HOM05D006435 ORTHO05D008262 2.9e-36 156.0 166 53.0
QL12p026394 Quercus lobata HOM05D006435 ORTHO05D008262 3.7e-36 155.6 144 56.2
Gohir.D05G050300 Gossypium hirsutum HOM05D006435 ORTHO05D008262 4.9e-36 155.2 102 65.7
HanXRQChr02g0048091 Helianthus annuus HOM05D006435 ORTHO05D008262 6.4e-36 154.8 151 51.7
TWI32G0701 Tripterygium wilfordii HOM05D006435 ORTHO05D008262 6.4e-36 154.8 168 54.2
Dinv30253 Davidia involucrata HOM05D006435 ORTHO05D004219 1.4e-35 153.7 144 57.6
Peaxi162Scf00523g00528 Petunia axillaris HOM05D006435 ORTHO05D008262 1.4e-35 153.7 124 60.5
Potri.018G037300 Populus trichocarpa HOM05D006435 ORTHO05D008262 1.4e-35 153.7 146 56.2
COL.COLO4_18696 Corchorus olitorius HOM05D006435 ORTHO05D008262 1.9e-35 153.3 149 55.7
Ciclev10009372m.g Citrus clementina HOM05D006435 ORTHO05D008262 2.4e-35 152.9 89 77.5
Thecc.09G039800 Theobroma cacao HOM05D006435 ORTHO05D008262 4.1e-35 152.1 141 56.0
Rhsim02G0182200 Rhododendron simsii HOM05D006435 ORTHO05D008262 5.4e-35 151.8 163 52.8
ECA233G4084 Erigeron canadensis HOM05D006435 ORTHO05D008262 7.1e-35 151.4 106 63.2
arahy.Tifrunner.gnm1.ann1.W16L9Q Arachis hypogaea HOM05D006435 ORTHO05D008262 9.2e-35 151.0 159 52.8
Carub.0006s2351 Capsella rubella HOM05D006435 ORTHO05D008262 1.2e-34 150.6 169 53.3
Hma1.2p1_0140F.1_g063520 Hydrangea macrophylla HOM05D006435 ORTHO05D008262 1.2e-34 150.6 160 51.2
Duzib187G0700 Durio zibethinus HOM05D006435 ORTHO05D008262 1.6e-34 150.2 137 55.5
PGR031G0325 Punica granatum HOM05D006435 ORTHO05D008262 2.1e-34 149.8 138 60.1
Eucgr.C01580 Eucalyptus grandis HOM05D006435 ORTHO05D008262 2.7e-34 149.4 143 58.7
MBI01_g28042_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 2.7e-34 149.4 113 62.8
PGSC0003DMG400014515 Solanum tuberosum HOM05D006435 ORTHO05D008262 2.7e-34 149.4 162 51.2
Actinidia31221 Actinidia chinensis HOM05D006435 ORTHO05D008262 3.5e-34 149.1 163 52.1
Lalb_Chr22g0360991 Lupinus albus HOM05D006435 ORTHO05D008262 4.6e-34 148.7 89 70.8
arahy.Tifrunner.gnm1.ann1.463B8J Arachis hypogaea HOM05D006435 ORTHO05D008262 6.0e-34 148.3 159 52.2
Cpa.g.sc78.80 Carica papaya HOM05D006435 ORTHO05D008262 6.0e-34 148.3 171 53.2
Lj1g0009240 Lotus japonicus HOM05D006435 ORTHO05D008262 6.0e-34 148.3 98 66.3
Solyc08g068270.3 Solanum lycopersicum HOM05D006435 ORTHO05D008262 7.8e-34 147.9 130 59.2
CAN.G797.1 Capsicum annuum HOM05D006435 ORTHO05D008262 1.7e-33 146.7 164 50.6
Hund19545 Selenicereus undatus HOM05D006435 ORTHO05D008262 1.7e-33 146.7 121 59.5
MELO3C003582.2 Cucumis melo HOM05D006435 ORTHO05D008262 2.3e-33 146.4 169 52.1
Gorai.009G051800 Gossypium raimondii HOM05D006435 ORTHO05D008262 2.3e-33 146.4 86 72.1
Cc00_g17690 Coffea canephora HOM05D006435 ORTHO05D008262 3.0e-33 146.0 138 57.2
Glyma.17G190400 Glycine max HOM05D006435 ORTHO05D008262 3.9e-33 145.6 92 68.5
Prupe.1G452600 Prunus persica HOM05D006435 ORTHO05D008262 3.9e-33 145.6 146 55.5
AUR62009330 Chenopodium quinoa HOM05D006435 ORTHO05D008262 5.1e-33 145.2 120 60.0
Lj8C603T5 Lonicera japonica HOM05D006435 ORTHO05D008262 8.6e-33 144.4 167 47.9
Gohir.A05G048400 Gossypium hirsutum HOM05D006435 ORTHO05D008262 1.1e-32 144.1 87 71.3
VMungo0647G0379 Vigna mungo HOM05D006435 ORTHO05D008262 1.1e-32 144.1 105 62.9
ATR0315G035 Amborella trichopoda HOM05D006435 ORTHO05D008262 1.5e-32 143.7 129 54.3
Aqoxy7G01634 Aquilegia oxysepala HOM05D006435 ORTHO05D008262 1.5e-32 143.7 140 53.6
Sopen08g022120 Solanum pennellii HOM05D006435 ORTHO05D008262 1.5e-32 143.7 130 56.9
Ah.16g105260 Amaranthus hybridus HOM05D006435 ORTHO05D008262 2.5e-32 142.9 139 51.8
VMungo1215G1854 Vigna mungo HOM05D006435 ORTHO05D008262 3.3e-32 142.5 133 54.1
RcHm_v2.0_Chr6g0305751 Rosa chinensis HOM05D006435 ORTHO05D008262 1.6e-31 140.2 126 54.0
PSO782G5114 Papaver somniferum HOM05D006435 ORTHO05D008262 2.8e-31 139.4 155 51.0
PSO832G3386 Papaver somniferum HOM05D006435 ORTHO05D008262 2.8e-31 139.4 152 50.7
SalBow4G2069 Salvia bowleyana HOM05D006435 ORTHO05D008262 2.8e-31 139.4 95 67.4
HPP92_001799 Vanilla planifolia HOM05D006435 ORTHO05D008262 2.8e-31 139.4 94 62.8
Oeu063249.1 Olea europaea HOM05D006435 ORTHO05D008262 3.6e-31 139.0 116 56.9
CDE05G2477 Ceratophyllum demersum HOM05D006435 ORTHO05D008262 4.7e-31 138.7 149 49.0
Sed0025420 Sechium edule HOM05D006435 ORTHO05D008262 1.1e-30 137.5 82 75.6
AUR62023016 Chenopodium quinoa HOM05D006435 ORTHO05D008262 1.4e-30 137.1 86 72.1
CsaV3_3G047410 Cucumis sativus L. HOM05D006435 ORTHO05D008262 2.4e-30 136.3 82 74.4
Solyc10g012245.1 Solanum lycopersicum HOM05D006435 ORTHO05D008262 2.4e-30 136.3 106 57.5
FvH4_2g36120 Fragaria vesca HOM05D006435 ORTHO05D008262 3.1e-30 136.0 131 55.0
EL10Ac2g04073 Beta vulgaris HOM05D006435 ORTHO05D008262 4.0e-30 135.6 82 72.0
Sc09g0009090 Simmondsia chinensis HOM05D006435 ORTHO05D008262 6.8e-30 134.8 82 72.0
Nn2g11721 Nelumbo nucifera HOM05D006435 ORTHO05D008262 8.9e-30 134.4 167 43.1
SGA_v2.0_scaffold280G46829 Striga asiatica HOM05D006435 ORTHO05D008262 1.2e-29 134.0 141 51.8
FAN27G2865 Fragaria x ananassa HOM05D006435 ORTHO05D008262 2.0e-29 133.3 128 55.5
MD15G1097700 Malus domestica HOM05D006435 ORTHO05D008262 2.0e-29 133.3 168 48.8
DCAR_007705 Daucus carota HOM05D006435 ORTHO05D008262 2.6e-29 132.9 82 70.7
FAN15G2703 Fragaria x ananassa HOM05D006435 ORTHO05D008262 2.6e-29 132.9 148 48.0
Nitab4.5_0003338g0080 Nicotiana tabacum HOM05D006435 ORTHO05D008262 2.6e-29 132.9 149 50.3
TPR.G12017 Trifolium pratense HOM05D006435 ORTHO05D008262 2.6e-29 132.9 132 54.5
Migut.A00245 Erythranthe guttata HOM05D006435 ORTHO05D008262 5.8e-29 131.7 151 49.0
Os05g0220600 Oryza sativa ssp. japonica HOM05D006435 ORTHO05D008262 5.8e-29 131.7 94 59.6
MSTRG.11716 Avicennia marina HOM05D006435 ORTHO05D008262 9.9e-29 131.0 85 70.6
Medtr1g008300 Medicago truncatula HOM05D006435 ORTHO05D008262 1.7e-28 130.2 142 52.1
Zm00001eb350490 Zea mays HOM05D006435 ORTHO05D008262 1.4e-27 127.1 133 49.6
Phvul.001G078600 Phaseolus vulgaris HOM05D006435 ORTHO05D008262 1.9e-27 126.7 130 54.6
Psat6g034280 Pisum sativum HOM05D006435 ORTHO05D008262 1.2e-26 124.0 148 47.3
SEGI_13627 Sequoiadendron giganteum HOM05D006435 ORTHO05D008262 1.2e-26 124.0 102 53.9
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 2.3e-25 119.8 105 54.3
AagrBONN_evm.TU.Sc2ySwM_117.700 Anthoceros agrestis HOM05D006435 ORTHO05D008262 1.2e-23 114.0 89 57.3
FAN20G0337 Fragaria x ananassa HOM05D006435 ORTHO05D008262 3.1e-22 109.4 74 66.2
SMO116G0425 Selaginella moellendorffii HOM05D006435 ORTHO05D008262 5.8e-21 105.1 81 55.6
Pp3c15_3110 Physcomitrium patens HOM05D006435 ORTHO05D008262 1.4e-19 100.5 161 42.2
Mapoly0109s0030 Marchantia polymorpha HOM05D006435 ORTHO05D008262 1.6e-18 97.1 81 55.6
PSO782G5630 Papaver somniferum HOM05D006435 ORTHO05D008262 3.9e-17 92.4 79 51.9
Haze_21849 Corylus avellana HOM05D006435 ORTHO05D008262 1.5e-16 90.5 44 90.9
PSO832G3154 Papaver somniferum HOM05D006435 ORTHO05D008262 2.8e-15 86.3 66 56.1
Ciclev10010273m.g Citrus clementina HOM05D006435 ORTHO05D008262 6.2e-15 85.1 44 84.1
Eucgr.L02138 Eucalyptus grandis HOM05D006435 ORTHO05D008262 1.3e-12 77.4 143 40.6
TAR624G0864 Trochodendron aralioides HOM05D006435 ORTHO05D008262 2.3e-09 66.6 31 90.3
PRCOL_00005434 Prasinoderma coloniale HOM05D006435 ORTHO05D008262 3.9e-09 65.9 54 51.9
Haze_21850 Corylus avellana HOM05D006435 ORTHO05D008262 1.1e-08 64.3 122 36.9
Glyma.14G142000 Glycine max HOM05D006435 ORTHO05D008262 5.6e-08 62.0 43 62.8
Nitab4.5_0000052g0140 Nicotiana tabacum HOM05D006435 ORTHO05D008262 7.4e-08 61.6 139 36.0
Ca_12801_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 2.1e-07 60.1 56 50.0
Cre16.g664801 Chlamydomonas reinhardtii HOM05D006435 ORTHO05D008262 4.8e-07 58.9 65 41.5
PSO782G2728 Papaver somniferum HOM05D006435 ORTHO05D008262 1.8e-06 57.0 65 41.5


User provided reference genes

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