Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p35860 Brassica napus HOM05D002743 ORTHO05D002895 7.8e-103 377.1 186 100.0
SpUn0003_0080 Schrenkiella parvula HOM05D002743 ORTHO05D002895 7.2e-64 247.7 221 61.5
BraA02t08588Z Brassica rapa HOM05D002743 ORTHO05D002895 5.9e-42 174.9 141 66.7
Thhalv10009395m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 2.0e-34 149.8 179 50.8
AT3G28223 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 1.9e-32 143.3 172 45.9
Thhalv10000704m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 7.2e-32 141.4 197 46.2
Thhalv10009727m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 7.2e-32 141.4 205 45.9
A02p35850 Brassica napus HOM05D002743 ORTHO05D002895 4.0e-30 135.6 191 43.5
BraA02t08585Z Brassica rapa HOM05D002743 ORTHO05D002895 6.8e-30 134.8 191 43.5
BraA02t08589Z Brassica rapa HOM05D002743 ORTHO05D002895 6.8e-30 134.8 191 43.5
Carub.0005s0683 Capsella rubella HOM05D002743 ORTHO05D002895 6.8e-30 134.8 192 42.2
BcaC03g17512 Brassica carinata HOM05D002743 ORTHO05D002895 3.4e-29 132.5 191 42.9
C02p54750 Brassica napus HOM05D002743 ORTHO05D002895 3.4e-29 132.5 191 42.9
BolC2t11536H Brassica oleracea HOM05D002743 ORTHO05D002895 3.4e-29 132.5 191 42.9
Carub.0005s0673 Capsella rubella HOM05D002743 ORTHO05D002895 3.4e-29 132.5 174 45.4
AL3G39690 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 7.5e-29 131.3 189 42.3
BolC9t53387H Brassica oleracea HOM05D002743 ORTHO05D002895 8.3e-28 127.9 182 41.8
BcaC06g36618 Brassica carinata HOM05D002743 ORTHO05D002895 1.8e-27 126.7 200 41.0
BcaC06g36619 Brassica carinata HOM05D002743 ORTHO05D002895 1.8e-27 126.7 200 41.0
AT3G28330 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 2.4e-27 126.3 190 41.6
BraA09t36068Z Brassica rapa HOM05D002743 ORTHO05D002895 9.1e-27 124.4 210 37.1
Carub.0004s2674 Capsella rubella HOM05D002743 ORTHO05D002895 9.1e-27 124.4 200 43.5
BcaC02g09623 Brassica carinata HOM05D002743 ORTHO05D002895 1.0e-25 120.9 169 40.8
A09p04310 Brassica napus HOM05D002743 ORTHO05D002895 1.7e-25 120.2 210 36.7
BolC4t26059H Brassica oleracea HOM05D002743 ORTHO05D002895 1.5e-24 117.1 176 39.8
AL5G17830 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 2.5e-24 116.3 195 42.1
A02p35840 Brassica napus HOM05D002743 ORTHO05D002895 7.2e-24 114.8 77 75.3
C07p02110 Brassica napus HOM05D002743 ORTHO05D002895 9.5e-24 114.4 191 41.4
AT3G48220 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 1.6e-23 113.6 175 42.3
C09p04580 Brassica napus HOM05D002743 ORTHO05D002895 8.0e-23 111.3 182 37.9
AT3G28280 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 1.4e-22 110.5 196 37.2
A04p11100 Brassica napus HOM05D002743 ORTHO05D002895 4.0e-22 109.0 204 37.7
BcaC04g23794 Brassica carinata HOM05D002743 ORTHO05D002895 8.9e-22 107.8 201 36.8
BraA04t16772Z Brassica rapa HOM05D002743 ORTHO05D002895 1.2e-21 107.5 204 38.2
CARHR149600 Cardamine hirsuta HOM05D002743 ORTHO05D002895 1.2e-21 107.5 174 40.2
C09p04610 Brassica napus HOM05D002743 ORTHO05D002895 2.6e-21 106.3 201 36.3
BolC9t53389H Brassica oleracea HOM05D002743 ORTHO05D002895 2.6e-21 106.3 201 36.3
BcaC02g09624 Brassica carinata HOM05D002743 ORTHO05D002895 3.4e-21 105.9 204 36.8
BolC4t26061H Brassica oleracea HOM05D002743 ORTHO05D002895 3.4e-21 105.9 204 36.8
C04p44830 Brassica napus HOM05D002743 ORTHO05D002895 5.7e-21 105.1 204 38.2
BolC7t41637H Brassica oleracea HOM05D002743 ORTHO05D002895 5.7e-21 105.1 204 37.3
AL5G17810 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.3e-20 104.0 197 36.5
AL8G22320 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.7e-20 103.6 198 35.9
A07p07740 Brassica napus HOM05D002743 ORTHO05D002895 1.7e-20 103.6 204 36.8
BcaC06g35723 Brassica carinata HOM05D002743 ORTHO05D002895 2.2e-20 103.2 204 36.8
C07p11650 Brassica napus HOM05D002743 ORTHO05D002895 2.8e-20 102.8 204 37.3
BraA07t28566Z Brassica rapa HOM05D002743 ORTHO05D002895 3.7e-20 102.4 204 36.3
AL3G39670 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 4.9e-20 102.1 173 38.7
AL34U10080 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 6.3e-20 101.7 198 35.4
AL5G17850 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 8.3e-20 101.3 147 41.5
AL8G22310 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 2.4e-19 99.8 198 34.3
A03p54310 Brassica napus HOM05D002743 ORTHO05D002895 3.1e-19 99.4 209 34.0
Thhalv10001535m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 5.4e-19 98.6 170 40.0
Carub.0005s0676 Capsella rubella HOM05D002743 ORTHO05D002895 1.2e-18 97.4 194 34.0
AL133U10030 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 2.0e-18 96.7 161 37.9
BcaC04g23797 Brassica carinata HOM05D002743 ORTHO05D002895 4.5e-18 95.5 159 39.6
Thhalv10022100m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 5.9e-18 95.1 194 35.1
CARHR286050 Cardamine hirsuta HOM05D002743 ORTHO05D002895 1.0e-17 94.4 189 33.9
Carub.0005s0675 Capsella rubella HOM05D002743 ORTHO05D002895 1.3e-17 94.0 198 33.8
BolC7t45770H Brassica oleracea HOM05D002743 ORTHO05D002895 2.9e-17 92.8 174 35.1
Carub.0008s0568 Capsella rubella HOM05D002743 ORTHO05D002895 3.9e-17 92.4 194 35.6
BcaNung01438 Brassica carinata HOM05D002743 ORTHO05D002895 6.6e-17 91.7 169 34.9
CARHR292690 Cardamine hirsuta HOM05D002743 ORTHO05D002895 1.1e-16 90.9 155 37.4
BcaC04g23796 Brassica carinata HOM05D002743 ORTHO05D002895 3.3e-16 89.4 186 33.9
AL5G16370 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 3.6e-15 85.9 199 33.2
AL1G27780 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 6.1e-15 85.1 207 31.9
BcaB03g16763 Brassica carinata HOM05D002743 ORTHO05D002895 6.1e-15 85.1 180 36.7
BraA03t14493Z Brassica rapa HOM05D002743 ORTHO05D002895 1.4e-14 84.0 166 34.3
AL6G48200 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 2.3e-14 83.2 179 38.0
Carub.0006s2838 Capsella rubella HOM05D002743 ORTHO05D002895 2.3e-14 83.2 198 35.9
AT3G23950 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 3.1e-14 82.8 211 35.1
AL6G48160 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 8.9e-14 81.3 170 37.1
AT3G23970 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 1.2e-13 80.9 210 31.0
AL6G43490 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.5e-13 80.5 211 32.7
AL3G39540 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 2.0e-13 80.1 210 35.7
A02p35880 Brassica napus HOM05D002743 ORTHO05D002895 3.4e-13 79.3 85 52.9
AT1G15680 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 4.4e-13 79.0 195 31.8
BraA06t23552Z Brassica rapa HOM05D002743 ORTHO05D002895 4.4e-13 79.0 208 35.6
Thhalv10024137m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 7.5e-13 78.2 197 35.0
AL7G33200 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.3e-12 77.4 176 35.2
AL4G45790 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.7e-12 77.0 200 31.5
AL6G47130 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.7e-12 77.0 203 34.5
BcaC08g43177 Brassica carinata HOM05D002743 ORTHO05D002895 1.7e-12 77.0 203 35.5
BcaB07g33451 Brassica carinata HOM05D002743 ORTHO05D002895 2.2e-12 76.6 203 36.0
C06p04770 Brassica napus HOM05D002743 ORTHO05D002895 2.2e-12 76.6 210 34.3
BraA01t01181Z Brassica rapa HOM05D002743 ORTHO05D002895 4.9e-12 75.5 181 33.1
AL3G39570 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.4e-11 73.9 200 32.0
A01p12360 Brassica napus HOM05D002743 ORTHO05D002895 1.4e-11 73.9 181 33.1
BcaB06g26601 Brassica carinata HOM05D002743 ORTHO05D002895 2.4e-11 73.2 208 29.8
A06p03440 Brassica napus HOM05D002743 ORTHO05D002895 2.4e-11 73.2 203 35.0
C04p44820 Brassica napus HOM05D002743 ORTHO05D002895 2.4e-11 73.2 111 39.6
THA.LOC104823978 Tarenaya hassleriana HOM05D002743 ORTHO05D002895 3.2e-11 72.8 214 31.3
THA.LOC104824016 Tarenaya hassleriana HOM05D002743 ORTHO05D002895 9.2e-11 71.2 193 32.1
Carub.0003s2455 Capsella rubella HOM05D002743 ORTHO05D002895 1.2e-10 70.9 209 31.1
Aa31sc58G40 Aethionema arabicum HOM05D002743 ORTHO05D002895 2.0e-10 70.1 207 30.4
AT4G22430 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 2.0e-10 70.1 193 32.1
Aa31sc58G10 Aethionema arabicum HOM05D002743 ORTHO05D002895 6.0e-10 68.6 206 29.1
AL3G39550 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.0e-09 67.8 205 30.2
CARHR100280 Cardamine hirsuta HOM05D002743 ORTHO05D002895 1.3e-09 67.4 206 30.6
BcaNung04711 Brassica carinata HOM05D002743 ORTHO05D002895 1.7e-09 67.0 190 32.1
C07p12300 Brassica napus HOM05D002743 ORTHO05D002895 1.7e-09 67.0 209 30.1
BcaC06g35666 Brassica carinata HOM05D002743 ORTHO05D002895 2.3e-09 66.6 209 30.1
THA.LOC104805970 Tarenaya hassleriana HOM05D002743 ORTHO05D002895 2.3e-09 66.6 201 32.8
BcaC01g00721 Brassica carinata HOM05D002743 ORTHO05D002895 3.0e-09 66.2 142 37.3
C03p83580 Brassica napus HOM05D002743 ORTHO05D002895 3.0e-09 66.2 142 37.3
BolC3t20638H Brassica oleracea HOM05D002743 ORTHO05D002895 3.0e-09 66.2 142 37.3
Sp1g36850 Schrenkiella parvula HOM05D002743 ORTHO05D002895 3.0e-09 66.2 208 35.1
SpUn0137_0030 Schrenkiella parvula HOM05D002743 ORTHO05D002895 3.0e-09 66.2 208 35.1
AL5G18350 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 3.9e-09 65.9 187 29.4
BcaB08g36410 Brassica carinata HOM05D002743 ORTHO05D002895 5.0e-09 65.5 208 30.8
BolC1t01435H Brassica oleracea HOM05D002743 ORTHO05D002895 5.0e-09 65.5 187 33.7
BcaB06g27161 Brassica carinata HOM05D002743 ORTHO05D002895 1.1e-08 64.3 90 41.1
BcaB07g33449 Brassica carinata HOM05D002743 ORTHO05D002895 1.9e-08 63.5 198 27.8
BolC7t41698H Brassica oleracea HOM05D002743 ORTHO05D002895 1.9e-08 63.5 208 29.8
Carub.0005s1587 Capsella rubella HOM05D002743 ORTHO05D002895 1.9e-08 63.5 220 28.2
A07p08150 Brassica napus HOM05D002743 ORTHO05D002895 2.5e-08 63.2 208 29.3
BraA07t28599Z Brassica rapa HOM05D002743 ORTHO05D002895 2.5e-08 63.2 208 29.3
CARHR286560 Cardamine hirsuta HOM05D002743 ORTHO05D002895 2.5e-08 63.2 201 28.4
Sp3g21990 Schrenkiella parvula HOM05D002743 ORTHO05D002895 3.3e-08 62.8 210 28.6
CARHR229890 Cardamine hirsuta HOM05D002743 ORTHO05D002895 5.6e-08 62.0 197 32.0
BolC6t35599H Brassica oleracea HOM05D002743 ORTHO05D002895 7.3e-08 61.6 224 29.5
BcaB07g33448 Brassica carinata HOM05D002743 ORTHO05D002895 9.5e-08 61.2 201 28.4
Thhalv10029227m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 4.7e-07 58.9 200 30.5
CARHR025250 Cardamine hirsuta HOM05D002743 ORTHO05D002895 6.2e-07 58.5 188 30.3
CARHR033610 Cardamine hirsuta HOM05D002743 ORTHO05D002895 1.4e-06 57.4 212 29.7
CARHR040090 Cardamine hirsuta HOM05D002743 ORTHO05D002895 1.4e-06 57.4 211 30.3


User provided reference genes

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