Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p34960 Brassica napus HOM05D013494 ORTHO05D015477 2.2e-30 135.6 102 100.0
BraA02t08504Z Brassica rapa HOM05D013494 ORTHO05D015477 9.8e-23 110.2 65 80.0
BraA02t08502Z Brassica rapa HOM05D013494 ORTHO05D015477 2.7e-20 102.1 111 80.2
C02p53620 Brassica napus HOM05D013494 ORTHO05D015477 1.3e-19 99.8 91 94.5
BolC2t11432H Brassica oleracea HOM05D013494 ORTHO05D015477 1.4e-16 89.7 129 70.5
C02p53640 Brassica napus HOM05D013494 ORTHO05D015477 1.8e-16 89.4 100 72.0
A02p34940 Brassica napus HOM05D013494 ORTHO05D015477 1.1e-13 80.1 49 83.7
BcaB07g30197 Brassica carinata HOM05D000350 ORTHO05D015477 3.6e-09 65.1 66 63.6
AT3G27010 Arabidopsis thaliana HOM05D000350 ORTHO05D000228 6.2e-09 64.3 66 62.1
C07p36110 Brassica napus HOM05D000350 ORTHO05D000228 8.0e-09 63.9 123 42.3
BcaC06g33868 Brassica carinata HOM05D000350 ORTHO05D000228 4.0e-08 61.6 89 51.7
BolC7t44125H Brassica oleracea HOM05D000350 ORTHO05D000228 4.0e-08 61.6 71 60.6
A06p41550 Brassica napus HOM05D000350 ORTHO05D000228 5.2e-08 61.2 77 53.2
BraA06t27080Z Brassica rapa HOM05D000350 ORTHO05D000228 5.2e-08 61.2 77 53.2
BcaC06g31027 Brassica carinata HOM05D000350 ORTHO05D000228 1.2e-07 60.1 70 58.6
BcaC04g23912 Brassica carinata HOM05D000350 ORTHO05D000228 2.6e-07 58.9 71 60.6
AL5G16030 Arabidopsis lyrata HOM05D000350 ORTHO05D000228 9.8e-07 57.0 68 58.8
Thhalv10004391m.g Eutrema salsugineum HOM05D000350 ORTHO05D000228 1.3e-06 56.6 85 47.1
CARHR148200 Cardamine hirsuta HOM05D000350 ORTHO05D000228 1.7e-06 56.2 79 49.4
CANSAT64G1794 Cannabis sativa HOM05D000350 ORTHO05D000228 2.9e-06 55.5 72 48.6
Sp2g16130 Schrenkiella parvula HOM05D000350 ORTHO05D000228 3.7e-06 55.1 86 45.3
Carub.0005s0520 Capsella rubella HOM05D000350 ORTHO05D000228 6.4e-06 54.3 68 55.9
QL02p070859 Quercus lobata HOM05D000350 ORTHO05D000228 6.4e-06 54.3 61 52.5
CiPaw.03G058100 Carya illinoinensis HOM05D000350 ORTHO05D000228 8.3e-06 53.9 69 50.7
THA.LOC104823985 Tarenaya hassleriana HOM05D000350 ORTHO05D000228 8.3e-06 53.9 54 53.7


User provided reference genes

Program Settings