Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p30770 Brassica napus HOM05D009342 ORTHO05D012604 7.9e-41 169.9 77 100.0
BraA02t08092Z Brassica rapa HOM05D009342 ORTHO05D012604 2.3e-40 168.3 77 98.7
C02p48340 Brassica napus HOM05D009342 ORTHO05D012604 1.1e-39 166.0 77 97.4
A02p30830 Brassica napus HOM05D009342 ORTHO05D012604 4.3e-39 164.1 77 96.1
BraA02t08097Z Brassica rapa HOM05D009342 ORTHO05D012604 4.3e-39 164.1 77 96.1
BcaC03g16932 Brassica carinata HOM05D009342 ORTHO05D012604 1.1e-31 139.4 62 98.4
C02p48330 Brassica napus HOM05D009342 ORTHO05D012604 1.2e-25 119.4 77 70.1
BolC2t10865H Brassica oleracea HOM05D009342 ORTHO05D012604 1.2e-25 119.4 77 70.1
A02p30760 Brassica napus HOM05D009342 ORTHO05D012604 8.7e-24 113.2 77 67.5
BraA02t08091Z Brassica rapa HOM05D009342 ORTHO05D012604 8.7e-24 113.2 77 67.5
BcaC03g16931 Brassica carinata HOM05D009342 ORTHO05D012604 2.9e-19 98.2 62 69.4
AT5G47077 Arabidopsis thaliana HOM05D009342 ORTHO05D012604 1.6e-17 92.4 74 59.5
AL8G11140 Arabidopsis lyrata HOM05D009342 ORTHO05D012604 1.9e-15 85.5 71 56.3
AT5G47075 Arabidopsis thaliana HOM05D009342 ORTHO05D012604 3.3e-15 84.7 74 54.1
AT5G47175 Arabidopsis thaliana HOM05D009342 ORTHO05D012604 3.1e-13 78.2 79 49.4
Carub.0008s0057 Capsella rubella HOM05D009342 ORTHO05D012604 9.1e-13 76.6 78 47.4
BcaB07g30795 Brassica carinata HOM05D009342 ORTHO05D012604 1.5e-12 75.9 78 51.3
Carub.0008s0074 Capsella rubella HOM05D009342 ORTHO05D012604 4.5e-12 74.3 77 49.4
A09p22830 Brassica napus HOM05D009342 ORTHO05D012604 9.4e-10 66.6 64 48.4
BraA09t37885Z Brassica rapa HOM05D009342 ORTHO05D012604 9.4e-10 66.6 64 48.4
C09p29340 Brassica napus HOM05D009342 ORTHO05D012604 1.2e-09 66.2 64 46.9
Carub.0004s1016 Capsella rubella HOM05D009342 ORTHO05D009997 3.6e-09 64.7 79 44.3
Aa31LG10G15250 Aethionema arabicum HOM05D009342 ORTHO05D009997 4.6e-09 64.3 74 36.5
C08p36050 Brassica napus HOM05D009342 ORTHO05D009997 7.9e-09 63.5 77 39.0
BolC8t51185H Brassica oleracea HOM05D009342 ORTHO05D009997 7.9e-09 63.5 77 39.0
BcaC07g40621 Brassica carinata HOM05D009342 ORTHO05D009997 1.0e-08 63.2 77 39.0
AT3G61172 Arabidopsis thaliana HOM05D009342 ORTHO05D009997 3.0e-08 61.6 74 36.5
A09p53240 Brassica napus HOM05D009342 ORTHO05D009997 3.0e-08 61.6 77 39.0
Sp5g02203 Schrenkiella parvula HOM05D009342 ORTHO05D009997 3.9e-08 61.2 77 36.4
CARHR101820 Cardamine hirsuta HOM05D007747 ORTHO05D009997 5.1e-08 60.8 78 41.0
Carub.0005s2783 Capsella rubella HOM05D009342 ORTHO05D009997 9.7e-07 56.6 77 36.4
CARHR096880 Cardamine hirsuta HOM05D007747 ORTHO05D009997 1.3e-06 56.2 78 37.2
AT2G28355 Arabidopsis thaliana HOM05D021605 ORTHO05D010567 4.8e-06 54.3 69 36.2


User provided reference genes

Program Settings