Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p29150 Brassica napus HOM05D002285 ORTHO05D009255 6.5e-47 190.7 117 100.0
C02p46230 Brassica napus HOM05D002285 ORTHO05D009255 5.9e-32 141.0 96 91.7
BcaC06g31551 Brassica carinata HOM05D002285 ORTHO05D009255 1.3e-31 139.8 114 63.2
Sp2g10370 Schrenkiella parvula HOM05D002285 ORTHO05D009255 1.1e-30 136.7 108 75.9
BcaC06g34433 Brassica carinata HOM05D002285 ORTHO05D009255 4.7e-29 131.3 110 79.1
C07p28510 Brassica napus HOM05D002285 ORTHO05D009255 4.7e-29 131.3 110 79.1
BolC7t43391H Brassica oleracea HOM05D002285 ORTHO05D009255 4.7e-29 131.3 110 79.1
BcaC03g16748 Brassica carinata HOM05D002285 ORTHO05D009255 6.8e-28 127.5 86 94.2
BolC2t10678H Brassica oleracea HOM05D002285 ORTHO05D009255 6.8e-28 127.5 86 94.2
Carub.0008s0269 Capsella rubella HOM05D002285 ORTHO05D009255 5.8e-27 124.4 110 76.4
BraA06t27534Z Brassica rapa HOM05D002285 ORTHO05D009255 9.8e-27 123.6 113 60.2
AT5G45420 Arabidopsis thaliana HOM05D002285 ORTHO05D009255 2.9e-26 122.1 110 73.6
A06p46600 Brassica napus HOM05D002285 ORTHO05D009255 1.9e-25 119.4 113 58.4
CARHR176650 Cardamine hirsuta HOM05D002285 ORTHO05D009255 5.4e-25 117.9 111 74.8
Aa31LG9G7580 Aethionema arabicum HOM05D002285 ORTHO05D009255 9.5e-22 107.1 111 68.5
THA.LOC104806190 Tarenaya hassleriana HOM05D002285 ORTHO05D009255 1.5e-19 99.8 103 55.3
Cpa.g.sc516.1 Carica papaya HOM05D002285 ORTHO05D009255 3.5e-16 88.6 98 48.0
Thecc.03G234200 Theobroma cacao HOM05D002285 ORTHO05D009255 5.1e-15 84.7 96 45.8
Duzib068G0948 Durio zibethinus HOM05D002285 ORTHO05D009255 6.6e-15 84.3 96 45.8
Gorai.003G179800 Gossypium raimondii HOM05D002285 ORTHO05D009255 1.1e-14 83.6 115 44.3
Manes.15G172700 Manihot esculenta HOM05D002285 ORTHO05D009255 2.5e-14 82.4 116 47.4
Gohir.A03G002800 Gossypium hirsutum HOM05D002285 ORTHO05D009255 4.3e-14 81.6 115 43.5
Duzib205G1165 Durio zibethinus HOM05D002285 ORTHO05D009255 1.2e-13 80.1 96 45.8
TWI31G1223 Tripterygium wilfordii HOM05D002285 ORTHO05D009255 8.1e-13 77.4 105 48.6
Potri.001G147000 Populus trichocarpa HOM05D002285 ORTHO05D009255 1.4e-12 76.6 116 43.1
Sed0018690 Sechium edule HOM05D002285 ORTHO05D009255 1.4e-12 76.6 114 42.1
CsaV3_3G049540 Cucumis sativus L. HOM05D002285 ORTHO05D009255 2.3e-12 75.9 114 42.1
MELO3C003372.2 Cucumis melo HOM05D002285 ORTHO05D009255 3.1e-12 75.5 95 45.3
Cfa014517 Carpinus fangiana HOM05D002285 ORTHO05D009255 5.2e-12 74.7 117 38.5
Phvul.002G269900 Phaseolus vulgaris HOM05D002285 ORTHO05D009255 1.2e-11 73.6 94 46.8
VMungo0251G1000 Vigna mungo HOM05D002285 ORTHO05D009255 1.2e-11 73.6 94 48.9
Gohir.D03G169500 Gossypium hirsutum HOM05D002285 ORTHO05D009255 2.6e-11 72.4 115 41.7
Prupe.5G047100 Prunus persica HOM05D002285 ORTHO05D009255 3.4e-11 72.0 120 36.7
QL12p007193 Quercus lobata HOM05D002285 ORTHO05D009255 3.4e-11 72.0 120 40.8
Eucgr.E00315 Eucalyptus grandis HOM05D002285 ORTHO05D009255 7.5e-11 70.9 107 38.3
CiPaw.12G060200 Carya illinoinensis HOM05D002285 ORTHO05D009255 1.3e-10 70.1 114 40.4
Atru.chr6.1776 Acer truncatum HOM05D002285 ORTHO05D009255 1.7e-10 69.7 117 36.8
Ciclev10032127m.g Citrus clementina HOM05D002285 ORTHO05D009255 2.2e-10 69.3 106 42.5
TAR375G0607 Trochodendron aralioides HOM05D002285 ORTHO05D009255 2.9e-10 68.9 110 38.2
Glyma.05G189200 Glycine max HOM05D002285 ORTHO05D009255 3.7e-10 68.6 94 40.4
COL.COLO4_17111 Corchorus olitorius HOM05D002285 ORTHO05D009255 4.9e-10 68.2 98 41.8
Lalb_Chr07g0184551 Lupinus albus HOM05D002285 ORTHO05D009255 1.1e-09 67.0 100 44.0
PGR042G0121 Punica granatum HOM05D002285 ORTHO05D009255 1.1e-09 67.0 98 42.9
Ca_17655_v3 Cicer arietinum L. HOM05D002285 ORTHO05D009255 1.4e-09 66.6 94 41.5
RcHm_v2.0_Chr7g0208261 Rosa chinensis HOM05D002285 ORTHO05D009255 1.9e-09 66.2 116 36.2
FvH4_5g21140 Fragaria vesca HOM05D002285 ORTHO05D009255 2.4e-09 65.9 101 38.6
FAN18G1893 Fragaria x ananassa HOM05D002285 ORTHO05D009255 2.4e-09 65.9 101 38.6
Ah.12g053690 Amaranthus hybridus HOM05D002285 ORTHO05D009255 3.2e-09 65.5 100 43.0
FAN08G0952 Fragaria x ananassa HOM05D002285 ORTHO05D009255 3.2e-09 65.5 100 38.0
Dinv28914 Davidia involucrata HOM05D002285 ORTHO05D009255 4.1e-09 65.1 107 41.1
CSS0042705 Camellia sinensis var. sinensis HOM05D002285 ORTHO05D009255 5.4e-09 64.7 98 43.9
FAN13G2873 Fragaria x ananassa HOM05D002285 ORTHO05D009255 5.4e-09 64.7 101 38.6
Oeu028031.1 Olea europaea HOM05D002285 ORTHO05D009255 5.4e-09 64.7 100 41.0
Psat7g048120 Pisum sativum HOM05D002285 ORTHO05D009255 5.4e-09 64.7 94 38.3
Sc07g0008790 Simmondsia chinensis HOM05D002285 ORTHO05D009255 5.4e-09 64.7 97 44.3
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 9.2e-09 63.9 110 39.1
Migut.A01004 Erythranthe guttata HOM05D002285 ORTHO05D009255 1.2e-08 63.5 110 37.3
MD06G1040800 Malus domestica HOM05D002285 ORTHO05D009255 3.5e-08 62.0 122 34.4
Sopen08g025870 Solanum pennellii HOM05D002285 ORTHO05D009255 3.5e-08 62.0 97 39.2
PGSC0003DMG400024213 Solanum tuberosum HOM05D002285 ORTHO05D009255 3.5e-08 62.0 97 39.2
Medtr8g093080 Medicago truncatula HOM05D002285 ORTHO05D009255 6.0e-08 61.2 92 40.2
Lsat_1_v5_gn_5_187701 Lactuca sativa HOM05D002285 ORTHO05D009255 7.8e-08 60.8 99 37.4
Hund11271 Selenicereus undatus HOM05D002285 ORTHO05D009255 1.0e-07 60.5 110 34.5
Cc08_g01890 Coffea canephora HOM05D002285 ORTHO05D009255 1.3e-07 60.1 104 36.5
SHI10334 Sapria himalayana HOM05D002285 ORTHO05D009255 1.7e-07 59.7 108 37.0
ECA246G1023 Erigeron canadensis HOM05D002285 ORTHO05D009255 2.3e-07 59.3 99 37.4
HanXRQChr06g0167311 Helianthus annuus HOM05D002285 ORTHO05D009255 3.0e-07 58.9 99 39.4
Solyc08g077290.1 Solanum lycopersicum HOM05D002285 ORTHO05D009255 3.0e-07 58.9 114 37.7
Nitab4.5_0002055g0110 Nicotiana tabacum HOM05D002285 ORTHO05D009255 5.1e-07 58.2 105 38.1
SGA_v2.0_scaffold90G27898 Striga asiatica HOM05D002285 ORTHO05D009255 5.1e-07 58.2 104 38.5
DCAR_024978 Daucus carota HOM05D002285 ORTHO05D009255 6.6e-07 57.8 95 37.9
Aqoxy3G02523 Aquilegia oxysepala HOM05D002285 ORTHO05D009255 1.1e-06 57.0 97 38.1
Peaxi162Scf00084g00092 Petunia axillaris HOM05D002285 ORTHO05D009255 1.5e-06 56.6 106 39.6
TPR.G37318 Trifolium pratense HOM05D002285 ORTHO05D009255 1.9e-06 56.2 137 33.6
MD16G1268900 Malus domestica HOM05D002285 ORTHO05D009255 2.5e-06 55.8 120 30.8
Lj4g0007705 Lotus japonicus HOM05D002285 ORTHO05D009255 3.3e-06 55.5 94 38.3
EL10As14g24089 Beta vulgaris HOM05D002285 ORTHO05D009255 4.3e-06 55.1 114 33.3
unitig_32.g11505 Utricularia gibba HOM05D002285 ORTHO05D009255 5.6e-06 54.7 101 40.6
CAN.G1445.16 Capsicum annuum HOM05D002285 ORTHO05D009255 7.3e-06 54.3 105 50.5
Nitab4.5_0006693g0010 Nicotiana tabacum HOM05D002285 ORTHO05D009255 9.5e-06 53.9 114 37.7


User provided reference genes

Program Settings