Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p28510 Brassica napus HOM05D002102 ORTHO05D008242 1.1e-87 326.6 171 100.0
BcaC06g31600 Brassica carinata HOM05D002102 ORTHO05D008242 2.9e-35 152.5 281 44.8
BraA06t27576Z Brassica rapa HOM05D002102 ORTHO05D008242 1.4e-34 150.2 196 53.1
BcaC06g34527 Brassica carinata HOM05D002102 ORTHO05D008242 1.9e-34 149.8 175 57.1
C07p27540 Brassica napus HOM05D002102 ORTHO05D008242 1.9e-34 149.8 175 57.1
BolC7t43285H Brassica oleracea HOM05D002102 ORTHO05D008242 1.9e-34 149.8 175 57.1
A06p47030 Brassica napus HOM05D002102 ORTHO05D008242 2.4e-34 149.4 175 56.6
Sp2g09460 Schrenkiella parvula HOM05D002102 ORTHO05D008242 2.4e-34 149.4 175 57.1
BcaB07g30508 Brassica carinata HOM05D002102 ORTHO05D008242 1.6e-33 146.7 284 43.0
Thhalv10000983m.g Eutrema salsugineum HOM05D002102 ORTHO05D008242 1.1e-31 140.6 173 54.9
C02p45240 Brassica napus HOM05D002102 ORTHO05D008242 9.9e-28 127.5 142 57.7
BraA02t07887Z Brassica rapa HOM05D002102 ORTHO05D008242 2.9e-27 125.9 123 59.3
BolC2t10554H Brassica oleracea HOM05D002102 ORTHO05D008242 4.9e-27 125.2 139 57.6
CARHR178230 Cardamine hirsuta HOM05D002102 ORTHO05D008242 1.1e-26 124.0 173 49.1
AL8G14900 Arabidopsis lyrata HOM05D002102 ORTHO05D008242 9.3e-26 120.9 171 46.8
Carub.0008s0361 Capsella rubella HOM05D002102 ORTHO05D008242 1.6e-25 120.2 171 46.2
AT5G44650 Arabidopsis thaliana HOM05D002102 ORTHO05D008242 4.6e-25 118.6 126 55.6
vmacro11020 Vaccinium macrocarpon HOM05D002102 ORTHO05D008242 1.1e-23 114.0 147 49.0
arahy.Tifrunner.gnm1.ann1.1TYS6L Arachis hypogaea HOM05D002102 ORTHO05D008242 7.4e-23 111.3 126 54.8
Lj4g0016411 Lotus japonicus HOM05D002102 ORTHO05D008242 2.1e-22 109.8 126 50.8
arahy.Tifrunner.gnm1.ann1.N8G6CJ Arachis hypogaea HOM05D002102 ORTHO05D008242 2.8e-22 109.4 126 52.4
Oeu023527.1 Olea europaea HOM05D002102 ORTHO05D008242 2.8e-22 109.4 119 52.9
Lj1A1152G38 Lonicera japonica HOM05D002102 ORTHO05D008242 3.7e-22 109.0 126 50.8
HanXRQChr09g0257721 Helianthus annuus HOM05D002102 ORTHO05D008242 4.8e-22 108.6 126 53.2
Medtr8g070680 Medicago truncatula HOM05D002102 ORTHO05D008242 6.2e-22 108.2 126 54.8
CANSAT35G0655 Cannabis sativa HOM05D002102 ORTHO05D008242 1.4e-21 107.1 126 50.0
QL11p010809 Quercus lobata HOM05D002102 ORTHO05D008242 1.4e-21 107.1 152 44.7
Peaxi162Scf00313g00048 Petunia axillaris HOM05D002102 ORTHO05D008242 2.4e-21 106.3 173 44.5
RcHm_v2.0_Chr5g0021821 Rosa chinensis HOM05D002102 ORTHO05D008242 4.0e-21 105.5 153 43.1
FvH4_3g13341 Fragaria vesca HOM05D002102 ORTHO05D008242 5.3e-21 105.1 153 43.1
Glyma.16G094300 Glycine max HOM05D002102 ORTHO05D008242 5.3e-21 105.1 126 50.8
TWI63G1577 Tripterygium wilfordii HOM05D002102 ORTHO05D008242 9.0e-21 104.4 126 48.4
Aqoxy1G01357 Aquilegia oxysepala HOM05D002102 ORTHO05D008242 1.2e-20 104.0 126 50.8
Ca_22534_v3 Cicer arietinum L. HOM05D002102 ORTHO05D008242 1.5e-20 103.6 126 50.0
TPR.G19825 Trifolium pratense HOM05D002102 ORTHO05D008242 1.5e-20 103.6 126 49.2
CSS0016773 Camellia sinensis var. sinensis HOM05D002102 ORTHO05D008242 2.0e-20 103.2 128 52.3
CiPaw.09G140600 Carya illinoinensis HOM05D002102 ORTHO05D008242 2.0e-20 103.2 128 50.8
Sed0010823 Sechium edule HOM05D002102 ORTHO05D008242 2.0e-20 103.2 126 48.4
Glyma.08G267700 Glycine max HOM05D002102 ORTHO05D008242 2.6e-20 102.8 153 43.1
Rhsim02G0171500 Rhododendron simsii HOM05D002102 ORTHO05D008242 2.6e-20 102.8 126 48.4
GSVIVG01037088001 Vitis vinifera HOM05D002102 ORTHO05D008242 2.6e-20 102.8 157 42.7
Ciclev10016300m.g Citrus clementina HOM05D002102 ORTHO05D008242 3.4e-20 102.4 126 47.6
Nn7g38425 Nelumbo nucifera HOM05D002102 ORTHO05D008242 3.4e-20 102.4 126 46.8
MELO3C006996.2 Cucumis melo HOM05D002102 ORTHO05D008242 4.5e-20 102.1 130 49.2
EL10Ac4g09967 Beta vulgaris HOM05D002102 ORTHO05D008242 5.8e-20 101.7 128 50.8
CsaV3_6G053190 Cucumis sativus L. HOM05D002102 ORTHO05D008242 5.8e-20 101.7 130 49.2
Eucgr.E03887 Eucalyptus grandis HOM05D002102 ORTHO05D008242 5.8e-20 101.7 153 44.4
Lalb_Chr21g0315091 Lupinus albus HOM05D002102 ORTHO05D008242 5.8e-20 101.7 126 48.4
Potri.001G074200 Populus trichocarpa HOM05D002102 ORTHO05D008242 1.0e-19 100.9 126 47.6
Sabra01G0052500 Salix brachista HOM05D002102 ORTHO05D008242 1.0e-19 100.9 126 46.8
Lsat_1_v5_gn_8_106940 Lactuca sativa HOM05D002102 ORTHO05D008242 1.3e-19 100.5 126 48.4
Prupe.4G120800 Prunus persica HOM05D002102 ORTHO05D008242 1.7e-19 100.1 171 38.6
Cpa.g.sc30.78 Carica papaya HOM05D002102 ORTHO05D008242 2.2e-19 99.8 128 49.2
Gohir.A03G218300 Gossypium hirsutum HOM05D002102 ORTHO05D008242 2.9e-19 99.4 126 50.0
Manes.03G073000 Manihot esculenta HOM05D002102 ORTHO05D008242 2.9e-19 99.4 126 47.6
Nitab4.5_0002246g0020 Nicotiana tabacum HOM05D002102 ORTHO05D008242 2.9e-19 99.4 154 43.5
Actinidia34700 Actinidia chinensis HOM05D002102 ORTHO05D008242 3.8e-19 99.0 155 43.9
PGR004G2223 Punica granatum HOM05D002102 ORTHO05D008242 3.8e-19 99.0 153 39.9
TAR627G1208 Trochodendron aralioides HOM05D002102 ORTHO05D008242 3.8e-19 99.0 171 39.2
Aa31LG9G8520 Aethionema arabicum HOM05D002102 ORTHO05D008242 4.9e-19 98.6 156 40.4
Gohir.D02G240400 Gossypium hirsutum HOM05D002102 ORTHO05D008242 6.5e-19 98.2 126 50.0
PGSC0003DMG401011260 Solanum tuberosum HOM05D002102 ORTHO05D008242 6.5e-19 98.2 155 45.2
PGSC0003DMG402011260 Solanum tuberosum HOM05D002102 ORTHO05D008242 6.5e-19 98.2 155 45.2
Gorai.005G268700 Gossypium raimondii HOM05D002102 ORTHO05D008242 8.4e-19 97.8 126 50.0
Solyc10g005180.3 Solanum lycopersicum HOM05D002102 ORTHO05D008242 8.4e-19 97.8 128 49.2
Thecc.02G001200 Theobroma cacao HOM05D002102 ORTHO05D008242 1.1e-18 97.4 128 48.4
Zm00001eb150810 Zea mays HOM05D002102 ORTHO05D008242 1.4e-18 97.1 126 46.8
Cc09_g04620 Coffea canephora HOM05D002102 ORTHO05D008242 1.9e-18 96.7 126 49.2
Phvul.003G275400 Phaseolus vulgaris HOM05D002102 ORTHO05D008242 1.9e-18 96.7 129 52.7
MD10G1224400 Malus domestica HOM05D002102 ORTHO05D008242 4.2e-18 95.5 171 38.0
Os01g0798500 Oryza sativa ssp. japonica HOM05D002102 ORTHO05D008242 7.1e-18 94.7 119 46.2
unitig_92.g28193 Utricularia gibba HOM05D002594 ORTHO05D003499 2.7e-17 92.8 159 42.1
HPP92_001585 Vanilla planifolia HOM05D002102 ORTHO05D008242 1.0e-16 90.9 128 45.3
FAN11G2372 Fragaria x ananassa HOM05D002102 ORTHO05D008242 1.1e-15 87.4 142 38.7
FAN25G3128 Fragaria x ananassa HOM05D002102 ORTHO05D008242 1.1e-15 87.4 142 38.7
PSO675G4370 Papaver somniferum HOM05D002102 ORTHO05D008242 1.5e-15 87.0 126 42.1
FAN16G2960 Fragaria x ananassa HOM05D002102 ORTHO05D008242 1.9e-15 86.7 142 38.7
PSO170G6365 Papaver somniferum HOM05D002102 ORTHO05D008242 1.9e-15 86.7 126 42.1
Psat0s2609g0120 Pisum sativum HOM05D002102 ORTHO05D008242 3.3e-15 85.9 118 44.9
Haze_05188 Corylus avellana HOM05D002102 ORTHO05D008242 4.3e-15 85.5 174 37.4
BcaC03g16684 Brassica carinata HOM05D002102 ORTHO05D008242 9.6e-15 84.3 64 78.1
Dinv17885 Davidia involucrata HOM05D002102 ORTHO05D008242 2.1e-14 83.2 119 44.5
Ah.06g191610 Amaranthus hybridus HOM05D002851 ORTHO05D003084 6.2e-14 81.6 149 42.3
ClCG01G025950 Citrullus lanatus HOM05D002102 ORTHO05D008242 1.5e-12 77.0 115 42.6
MD05G1242700 Malus domestica HOM05D002102 ORTHO05D004119 2.0e-12 76.6 109 40.4
Pp3c15_7910 Physcomitrium patens HOM05D002102 ORTHO05D008242 2.6e-12 76.3 130 40.8
Mapoly0033s0150 Marchantia polymorpha HOM05D002102 ORTHO05D008242 4.5e-12 75.5 130 41.5
MBI02_g17886_MAGBIO Magnolia biondii HOM05D002102 ORTHO05D008242 5.0e-11 72.0 142 42.3
ECA232G0416 Erigeron canadensis HOM05D002102 ORTHO05D008242 6.5e-11 71.6 157 32.5
Actinidia31357 Actinidia chinensis HOM05D002102 ORTHO05D008242 1.4e-10 70.5 57 71.9
COL.COLO4_25027 Corchorus olitorius HOM05D002102 ORTHO05D008242 2.7e-09 66.2 99 42.4
Migut.M02036 Erythranthe guttata HOM05D002102 ORTHO05D008242 1.8e-08 63.5 131 32.1
CDE11G0809 Ceratophyllum demersum HOM05D002102 ORTHO05D008242 3.0e-08 62.8 108 38.9
PSO541G0118 Papaver somniferum HOM05D002102 ORTHO05D008242 3.3e-07 59.3 147 36.7
ATR0109G022 Amborella trichopoda HOM05D002102 ORTHO05D008242 5.7e-07 58.5 57 57.9
Atru.chr10.236 Acer truncatum HOM05D002102 ORTHO05D008242 7.4e-07 58.2 80 38.8
DCAR_001256 Daucus carota HOM05D002102 ORTHO05D008242 7.4e-07 58.2 146 32.2
FAN21G2948 Fragaria x ananassa HOM05D002102 ORTHO05D008242 2.8e-06 56.2 133 36.1
Oeu011782.1 Olea europaea HOM05D002102 ORTHO05D008242 6.3e-06 55.1 93 38.7


User provided reference genes

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