Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p22520 Brassica napus HOM05D039484 ORTHO05D033663 2.4e-119 432.2 220 100.0
BraA02t07255Z Brassica rapa HOM05D039484 ORTHO05D033663 2.1e-115 419.1 222 97.3
BcaC03g17455 Brassica carinata HOM05D000113 ORTHO05D006161 2.5e-15 86.7 135 45.9
THA.LOC104802184 Tarenaya hassleriana HOM05D000113 ORTHO05D006161 1.0e-13 81.3 135 43.0
A02p35320 Brassica napus HOM05D000113 ORTHO05D006161 1.4e-13 80.9 135 42.2
BraA02t08535Z Brassica rapa HOM05D000113 ORTHO05D006161 1.4e-13 80.9 135 42.2
BcaC03g17457 Brassica carinata HOM05D000113 ORTHO05D006161 3.1e-13 79.7 135 42.2
CARHR032810 Cardamine hirsuta HOM05D000113 ORTHO05D006161 3.1e-13 79.7 135 41.5
C02p54060 Brassica napus HOM05D000113 ORTHO05D006161 4.0e-13 79.3 135 42.2
BolC2t11468H Brassica oleracea HOM05D000113 ORTHO05D006161 4.0e-13 79.3 135 42.2
Cpa.g.sc151.33 Carica papaya HOM05D000113 ORTHO05D006161 4.0e-13 79.3 145 40.0
AT1G33390 Arabidopsis thaliana HOM05D000113 ORTHO05D006161 8.9e-13 78.2 135 41.5
CAN.G986.24 Capsicum annuum HOM05D000113 ORTHO05D000001 8.9e-13 78.2 135 38.5
GSVIVG01028054001 Vitis vinifera HOM05D000113 ORTHO05D006161 8.9e-13 78.2 135 39.3
Sp7g11220 Schrenkiella parvula HOM05D000113 ORTHO05D006161 1.2e-12 77.8 136 41.9
PSO339G3312 Papaver somniferum HOM05D000113 ORTHO05D006161 1.5e-12 77.4 135 40.0
Nn5g26851 Nelumbo nucifera HOM05D000113 ORTHO05D006161 2.6e-12 76.6 135 39.3
Nitab4.5_0004367g0140 Nicotiana tabacum HOM05D000113 ORTHO05D006161 2.6e-12 76.6 135 40.0
Solyc01g095710.3 Solanum lycopersicum HOM05D000113 ORTHO05D006161 2.6e-12 76.6 135 37.8
Sopen01g039450 Solanum pennellii HOM05D000113 ORTHO05D006161 2.6e-12 76.6 135 37.8
PGSC0003DMG401000100 Solanum tuberosum HOM05D000113 ORTHO05D006161 2.6e-12 76.6 135 37.8
AL1G47770 Arabidopsis lyrata HOM05D000113 ORTHO05D006161 4.4e-12 75.9 135 39.3
Peaxi162Scf00150g00139 Petunia axillaris HOM05D000113 ORTHO05D006161 4.4e-12 75.9 135 37.8
Oeu008340.1 Olea europaea HOM05D000113 ORTHO05D006161 5.8e-12 75.5 138 37.7
Atru.chr5.1086 Acer truncatum HOM05D000113 ORTHO05D006161 7.5e-12 75.1 134 39.6
Aa31LG1G28830 Aethionema arabicum HOM05D000113 ORTHO05D006161 7.5e-12 75.1 131 40.5
Carub.0001s3158 Capsella rubella HOM05D000113 ORTHO05D006161 7.5e-12 75.1 136 41.2
DCAR_012372 Daucus carota HOM05D000113 ORTHO05D006161 7.5e-12 75.1 136 39.7
Gohir.A07G126300 Gossypium hirsutum HOM05D000113 ORTHO05D006161 7.5e-12 75.1 135 37.8
Atru.chr9.1267 Acer truncatum HOM05D000113 ORTHO05D006161 9.8e-12 74.7 134 39.6
AL8G14950 Arabidopsis lyrata HOM05D000113 ORTHO05D006161 9.8e-12 74.7 135 39.3
Ciclev10018519m.g Citrus clementina HOM05D000113 ORTHO05D006161 9.8e-12 74.7 134 41.0
Thhalv10024243m.g Eutrema salsugineum HOM05D000113 ORTHO05D006161 9.8e-12 74.7 136 40.4
Gohir.D07G130400 Gossypium hirsutum HOM05D000113 ORTHO05D006161 9.8e-12 74.7 135 37.8
Gorai.001G141100 Gossypium raimondii HOM05D000113 ORTHO05D006161 9.8e-12 74.7 135 37.8
Cc08_g12990 Coffea canephora HOM05D000113 ORTHO05D006161 1.3e-11 74.3 135 35.6
DCAR_018927 Daucus carota HOM05D000310 ORTHO05D006161 1.3e-11 74.3 138 39.1
Cfa005867 Carpinus fangiana HOM05D000113 ORTHO05D006161 1.7e-11 73.9 135 36.3
Duzib138G1872 Durio zibethinus HOM05D000113 ORTHO05D006161 1.7e-11 73.9 135 38.5
Lsat_1_v5_gn_3_139220 Lactuca sativa HOM05D000113 ORTHO05D006161 1.7e-11 73.9 138 38.4
MBI04_g31155_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D006161 1.7e-11 73.9 135 38.5
Manes.01G223000 Manihot esculenta HOM05D000113 ORTHO05D006161 1.7e-11 73.9 134 38.8
Thecc.01G306300 Theobroma cacao HOM05D000113 ORTHO05D006161 1.7e-11 73.9 135 37.8
ClCG09G005490 Citrullus lanatus HOM05D000113 ORTHO05D006161 2.2e-11 73.6 135 37.8
HanXRQChr04g0105431 Helianthus annuus HOM05D000113 ORTHO05D006161 2.2e-11 73.6 136 39.7
QL12p027746 Quercus lobata HOM05D000113 ORTHO05D006161 2.9e-11 73.2 135 37.8
Thecc.10G083300 Theobroma cacao HOM05D000113 ORTHO05D006161 2.9e-11 73.2 135 37.0
CANSAT80G0530 Cannabis sativa HOM05D000113 ORTHO05D006161 4.9e-11 72.4 136 39.0
Migut.D00126 Erythranthe guttata HOM05D000113 ORTHO05D006161 4.9e-11 72.4 135 36.3
PGR044G2751 Punica granatum HOM05D000113 ORTHO05D006161 4.9e-11 72.4 137 42.3
SalBow6G1114 Salvia bowleyana HOM05D000113 ORTHO05D006161 4.9e-11 72.4 135 36.3
Dinv42094 Davidia involucrata HOM05D000113 ORTHO05D006161 6.4e-11 72.0 136 39.0
VMungo0331G1928 Vigna mungo HOM05D001793 ORTHO05D006161 6.4e-11 72.0 135 37.8
CSS0016737 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D006161 8.3e-11 71.6 135 40.0
CiPaw.07G112500 Carya illinoinensis HOM05D000113 ORTHO05D006161 8.3e-11 71.6 135 37.0
CsaV3_7G029610 Cucumis sativus L. HOM05D000113 ORTHO05D006161 8.3e-11 71.6 135 37.8
Lj5A370T56 Lonicera japonica HOM05D000113 ORTHO05D006161 8.3e-11 71.6 136 35.3
Sed0026170 Sechium edule HOM05D000113 ORTHO05D006161 8.3e-11 71.6 135 36.3
MSTRG.21654 Avicennia marina HOM05D000113 ORTHO05D006161 1.1e-10 71.2 143 39.2
Lalb_Chr10g0099391 Lupinus albus HOM05D000113 ORTHO05D006161 1.1e-10 71.2 134 37.3
Phvul.010G084200 Phaseolus vulgaris HOM05D000113 ORTHO05D006161 1.1e-10 71.2 135 37.0
Potri.002G201400 Populus trichocarpa HOM05D000113 ORTHO05D006161 1.1e-10 71.2 136 37.5
BolC2t10425H Brassica oleracea HOM05D039484 ORTHO05D033663 1.4e-10 70.9 49 73.5
Ca_15122_v3 Cicer arietinum L. HOM05D000113 ORTHO05D006161 1.4e-10 70.9 134 35.1
Eucgr.E04059 Eucalyptus grandis HOM05D000113 ORTHO05D006161 1.9e-10 70.5 135 36.3
Rhsim09G0109600 Rhododendron simsii HOM05D000113 ORTHO05D006161 1.9e-10 70.5 133 39.8
Glyma.03G024000 Glycine max HOM05D000113 ORTHO05D006161 2.4e-10 70.1 135 37.8
PSO675G6280 Papaver somniferum HOM05D000113 ORTHO05D006161 2.4e-10 70.1 149 36.2
Actinidia25823 Actinidia chinensis HOM05D000113 ORTHO05D006161 3.2e-10 69.7 142 36.6
vmacro04631 Vaccinium macrocarpon HOM05D000113 ORTHO05D006161 3.2e-10 69.7 142 37.3
ATR0307G121 Amborella trichopoda HOM05D000113 ORTHO05D006161 4.1e-10 69.3 135 36.3
TWI59G0818 Tripterygium wilfordii HOM05D000113 ORTHO05D006161 4.1e-10 69.3 135 36.3
BcaB03g16074 Brassica carinata HOM05D000113 ORTHO05D095878 5.4e-10 68.9 115 42.6
Lj2C1199T13 Lonicera japonica HOM05D000113 ORTHO05D006161 5.4e-10 68.9 143 36.4
Sc26g0003690 Simmondsia chinensis HOM05D000113 ORTHO05D006161 5.4e-10 68.9 142 38.0
TAR633G2709 Trochodendron aralioides HOM05D000113 ORTHO05D006161 5.4e-10 68.9 135 37.8
CDE07G0864 Ceratophyllum demersum HOM05D000113 ORTHO05D006161 7.0e-10 68.6 139 38.8
RcHm_v2.0_Chr4g0407811 Rosa chinensis HOM05D000113 ORTHO05D006161 7.0e-10 68.6 135 40.0
Sc15g0001890 Simmondsia chinensis HOM05D000113 ORTHO05D006161 7.0e-10 68.6 136 37.5
SGA_v2.0_scaffold334G49027 Striga asiatica HOM05D000113 ORTHO05D006161 7.0e-10 68.6 135 37.8
Lj2g0016628 Lotus japonicus HOM05D000113 ORTHO05D006161 9.2e-10 68.2 135 37.0
Rhsim01G0287700 Rhododendron simsii HOM05D000113 ORTHO05D006161 9.2e-10 68.2 135 38.5
SEGI_29750 Sequoiadendron giganteum HOM05D000113 ORTHO05D006161 9.2e-10 68.2 135 34.1
EL10Ac4g10264 Beta vulgaris HOM05D000113 ORTHO05D006161 1.2e-09 67.8 133 39.1
Glyma.01G142700 Glycine max HOM05D000113 ORTHO05D006161 1.2e-09 67.8 134 35.1
Haze_04980 Corylus avellana HOM05D001493 ORTHO05D006161 1.6e-09 67.4 135 34.1
Hma1.2p1_0212F.1_g090260 Hydrangea macrophylla HOM05D000113 ORTHO05D006161 1.6e-09 67.4 136 38.2
EL10Ac4g10280 Beta vulgaris HOM05D000113 ORTHO05D006161 2.7e-09 66.6 133 38.3
MD04G1241500 Malus domestica HOM05D000113 ORTHO05D006161 2.7e-09 66.6 135 37.0
AUR62008717 Chenopodium quinoa HOM05D000113 ORTHO05D006161 3.5e-09 66.2 135 35.6
AUR62025517 Chenopodium quinoa HOM05D000113 ORTHO05D006161 3.5e-09 66.2 134 35.1
Lj4g0011992 Lotus japonicus HOM05D000113 ORTHO05D006161 3.5e-09 66.2 134 34.3
TAR362G0332 Trochodendron aralioides HOM05D000113 ORTHO05D006161 3.5e-09 66.2 135 37.8
MD05G1017800 Malus domestica HOM05D000113 ORTHO05D006161 4.6e-09 65.9 135 36.3
TPR.G9858 Trifolium pratense HOM05D000113 ORTHO05D006161 4.6e-09 65.9 134 33.6
unitig_22.g5233 Utricularia gibba HOM05D000113 ORTHO05D006161 4.6e-09 65.9 139 37.4
CBR_g66799 Chara braunii HOM05D000113 ORTHO05D006161 6.0e-09 65.5 140 39.3
Medtr4g023590 Medicago truncatula HOM05D000113 ORTHO05D006161 6.0e-09 65.5 135 35.6
EL10Ac6g14998 Beta vulgaris HOM05D000113 ORTHO05D006161 7.8e-09 65.1 141 35.5
arahy.Tifrunner.gnm1.ann1.M111ST Arachis hypogaea HOM05D000113 ORTHO05D006161 1.0e-08 64.7 134 34.3
EL10Ac4g07792 Beta vulgaris HOM05D000113 ORTHO05D006161 1.0e-08 64.7 133 36.8
Psat7g233480 Pisum sativum HOM05D000113 ORTHO05D006161 1.0e-08 64.7 134 34.3
BcaC07g37590 Brassica carinata HOM05D000113 ORTHO05D006161 1.3e-08 64.3 131 36.6
ECA248G0290 Erigeron canadensis HOM05D000113 ORTHO05D006161 1.3e-08 64.3 143 35.0
Prupe.1G193500 Prunus persica HOM05D000113 ORTHO05D006161 1.3e-08 64.3 136 36.8
arahy.Tifrunner.gnm1.ann1.SIBB7F Arachis hypogaea HOM05D000113 ORTHO05D006161 1.7e-08 63.9 134 34.3
COL.COLO4_23301 Corchorus olitorius HOM05D000113 ORTHO05D006161 2.3e-08 63.5 164 31.1
MELO3C015960.2 Cucumis melo HOM05D000113 ORTHO05D006161 3.0e-08 63.2 135 34.1
SHI19097 Sapria himalayana HOM05D000113 ORTHO05D006161 3.0e-08 63.2 136 34.6
Hund05453 Selenicereus undatus HOM05D000113 ORTHO05D006161 5.0e-08 62.4 135 34.1
Os02g0736600 Oryza sativa ssp. japonica HOM05D000113 ORTHO05D006161 8.6e-08 61.6 135 34.1
FvH4_3g40090 Fragaria vesca HOM05D000113 ORTHO05D006161 1.5e-07 60.8 132 37.9
FAN21G3024 Fragaria x ananassa HOM05D000113 ORTHO05D006161 1.5e-07 60.8 132 37.9
AagrBONN_evm.TU.Sc2ySwM_344.808 Anthoceros agrestis HOM05D000482 ORTHO05D000349 3.3e-07 59.7 135 35.6
Zm00001eb253900 Zea mays HOM05D000113 ORTHO05D006161 5.6e-07 58.9 135 35.6
FAN16G3510 Fragaria x ananassa HOM05D000113 ORTHO05D006161 7.3e-07 58.5 132 37.9
Mapoly0044s0018 Marchantia polymorpha HOM05D000113 ORTHO05D006161 2.1e-06 57.0 138 32.6
Pp3c3_18630 Physcomitrium patens HOM05D000113 ORTHO05D006161 2.1e-06 57.0 139 31.7
Medtr4g120070 Medicago truncatula HOM05D000113 ORTHO05D006161 3.6e-06 56.2 122 32.0


User provided reference genes

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