Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p21060 Brassica napus HOM05D001285 ORTHO05D000199 2.8e-38 161.4 77 100.0
A09p31280 Brassica napus HOM05D001285 ORTHO05D000199 2.8e-38 161.4 77 100.0
BraA05t20715Z Brassica rapa HOM05D001285 ORTHO05D000199 2.8e-38 161.4 77 100.0
BraA06t25595Z Brassica rapa HOM05D001285 ORTHO05D000199 5.3e-37 157.1 77 97.4
BcaC05g27108 Brassica carinata HOM05D001285 ORTHO05D000199 1.7e-35 152.1 77 94.8
BcaC06g30937 Brassica carinata HOM05D001285 ORTHO05D000199 3.5e-33 144.4 77 89.6
BcaB03g15573 Brassica carinata HOM05D001285 ORTHO05D000199 1.0e-32 142.9 77 88.3
A02p26990 Brassica napus HOM05D001285 ORTHO05D000199 1.8e-29 132.1 77 84.4
BcaC04g20925 Brassica carinata HOM05D001285 ORTHO05D000199 8.2e-22 106.7 71 69.0
BolC2t07252H Brassica oleracea HOM05D001285 ORTHO05D000199 1.4e-21 105.9 71 69.0
BraA01t02157Z Brassica rapa HOM05D001285 ORTHO05D000199 3.1e-21 104.8 71 67.6
BolC3t17402H Brassica oleracea HOM05D001285 ORTHO05D000199 9.0e-21 103.2 54 90.7
BraA07t28518Z Brassica rapa HOM05D001285 ORTHO05D000199 1.2e-20 102.8 72 65.3
BraA03t11415Z Brassica rapa HOM05D001285 ORTHO05D000199 1.5e-20 102.4 71 66.2
BcaC07g41747 Brassica carinata HOM05D001285 ORTHO05D000199 2.6e-20 101.7 71 67.6
C01p17430 Brassica napus HOM05D001285 ORTHO05D000199 2.6e-20 101.7 55 87.3
C01p48530 Brassica napus HOM05D001285 ORTHO05D000199 3.8e-19 97.8 65 69.2
BcaC02g11078 Brassica carinata HOM05D001285 ORTHO05D000199 9.3e-18 93.2 71 57.7
BolC4t23605H Brassica oleracea HOM05D001285 ORTHO05D000199 9.3e-18 93.2 71 57.7
BcaB03g15494 Brassica carinata HOM05D001285 ORTHO05D000199 3.6e-17 91.3 72 59.7
BcaB06g28698 Brassica carinata HOM05D001285 ORTHO05D000199 3.6e-17 91.3 72 59.7
C09p65970 Brassica napus HOM05D001285 ORTHO05D000199 3.6e-17 91.3 71 57.7
BolC9t59420H Brassica oleracea HOM05D001285 ORTHO05D000199 3.6e-17 91.3 71 57.7
A02p36790 Brassica napus HOM05D001285 ORTHO05D000199 4.6e-17 90.9 71 57.7
BraA02t08671Z Brassica rapa HOM05D001285 ORTHO05D000199 4.6e-17 90.9 71 57.7
CARHR104030 Cardamine hirsuta HOM05D001285 ORTHO05D000199 4.6e-17 90.9 70 55.7
BcaNung03065 Brassica carinata HOM05D001285 ORTHO05D000199 6.1e-17 90.5 71 59.2
BcaB01g00219 Brassica carinata HOM05D001285 ORTHO05D000199 7.9e-17 90.1 72 59.7
BcaC07g38661 Brassica carinata HOM05D001285 ORTHO05D000199 7.9e-17 90.1 73 56.2
C02p49790 Brassica napus HOM05D001285 ORTHO05D000199 7.9e-17 90.1 73 56.2
C03p03120 Brassica napus HOM05D001285 ORTHO05D000199 1.0e-16 89.7 71 56.3
BraA09t38468Z Brassica rapa HOM05D001285 ORTHO05D000199 1.0e-16 89.7 71 59.2
BcaC05g27865 Brassica carinata HOM05D001285 ORTHO05D000199 1.8e-16 89.0 71 57.7
C05p38640 Brassica napus HOM05D001285 ORTHO05D000199 1.8e-16 89.0 71 57.7
BolC5t32603H Brassica oleracea HOM05D001285 ORTHO05D021957 1.8e-16 89.0 71 57.7
A06p22000 Brassica napus HOM05D001285 ORTHO05D000199 3.0e-16 88.2 71 57.7
C02p23920 Brassica napus HOM05D001285 ORTHO05D000199 3.0e-16 88.2 72 56.9
C02p57920 Brassica napus HOM05D001285 ORTHO05D000199 3.0e-16 88.2 72 56.9
Carub.0006s2832 Capsella rubella HOM05D001285 ORTHO05D000199 3.0e-16 88.2 72 56.9
C02p29930 Brassica napus HOM05D001285 ORTHO05D000199 5.1e-16 87.4 71 57.7
A10p12140 Brassica napus HOM05D001285 ORTHO05D000199 6.7e-16 87.0 72 56.9
BcaC03g17776 Brassica carinata HOM05D001285 ORTHO05D000199 8.7e-16 86.7 72 55.6
BolC2t11860H Brassica oleracea HOM05D001285 ORTHO05D000199 8.7e-16 86.7 72 55.6
BraA05t21432Z Brassica rapa HOM05D001285 ORTHO05D000199 1.5e-15 85.9 71 56.3
BcaC08g43423 Brassica carinata HOM05D001285 ORTHO05D000199 1.9e-15 85.5 72 55.6
C06p15920 Brassica napus HOM05D001285 ORTHO05D000199 1.9e-15 85.5 68 55.9
BolC6t35851H Brassica oleracea HOM05D001285 ORTHO05D000199 1.9e-15 85.5 72 55.6
Carub.0004s0683 Capsella rubella HOM05D001285 ORTHO05D000199 1.9e-15 85.5 72 55.6
BcaC03g14913 Brassica carinata HOM05D001285 ORTHO05D000199 2.5e-15 85.1 72 55.6
BolC1t02405H Brassica oleracea HOM05D001285 ORTHO05D000199 3.3e-15 84.7 72 55.6
BcaC08g44187 Brassica carinata HOM05D001285 ORTHO05D000199 7.4e-15 83.6 68 55.9
C07p23590 Brassica napus HOM05D001285 ORTHO05D000199 1.3e-14 82.8 75 53.3
AT5G45570 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 1.6e-14 82.4 74 48.6
CARHR260230 Cardamine hirsuta HOM05D001285 ORTHO05D000199 1.6e-14 82.4 50 72.0
BcaB02g11283 Brassica carinata HOM05D001285 ORTHO05D000199 2.2e-14 82.0 66 57.6
Thhalv10002866m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.2e-14 82.0 71 50.7
Carub.0005s0342 Capsella rubella HOM05D001285 ORTHO05D000199 2.8e-14 81.6 65 56.9
A10p10700 Brassica napus HOM05D001285 ORTHO05D000199 6.3e-14 80.5 72 54.2
C06p24190 Brassica napus HOM05D001285 ORTHO05D000199 6.3e-14 80.5 66 53.0
AL1G51180 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.1e-13 79.7 76 47.4
AL1G60090 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.1e-13 79.7 76 48.7
BraA09t37769Z Brassica rapa HOM05D001285 ORTHO05D000199 1.1e-13 79.7 72 54.2
C05p22020 Brassica napus HOM05D001285 ORTHO05D000199 1.4e-13 79.3 71 53.5
A01p27760 Brassica napus HOM05D001285 ORTHO05D000199 2.4e-13 78.6 71 54.9
A05p21700 Brassica napus HOM05D001285 ORTHO05D000199 3.1e-13 78.2 71 53.5
C08p11380 Brassica napus HOM05D001285 ORTHO05D000199 3.1e-13 78.2 71 54.9
AL3G30210 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 4.1e-13 77.8 76 46.1
AL4G17640 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 4.1e-13 77.8 57 54.4
CARHR032540 Cardamine hirsuta HOM05D001285 ORTHO05D021957 5.3e-13 77.4 49 69.4
BcaC05g25966 Brassica carinata HOM05D001285 ORTHO05D000199 6.9e-13 77.0 52 59.6
C08p09430 Brassica napus HOM05D004489 ORTHO05D000199 9.1e-13 76.6 68 52.9
C09p20890 Brassica napus HOM05D001285 ORTHO05D000199 9.1e-13 76.6 71 50.7
C09p55130 Brassica napus HOM05D001285 ORTHO05D000199 1.2e-12 76.3 71 53.5
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 1.2e-12 76.3 71 52.1
Carub.0006s2659 Capsella rubella HOM05D001285 ORTHO05D000199 2.0e-12 75.5 52 59.6
Carub.0004s0691 Capsella rubella HOM05D001285 ORTHO05D000199 2.6e-12 75.1 75 48.0
C06p26050 Brassica napus HOM05D001285 ORTHO05D000199 5.9e-12 73.9 71 52.1
AL3G40680 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 7.7e-12 73.6 69 46.4
AL3G44710 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 7.7e-12 73.6 72 48.6
AT4G08430 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 7.7e-12 73.6 74 45.9
BcaB02g07816 Brassica carinata HOM05D001285 ORTHO05D000199 7.7e-12 73.6 71 50.7
AL3G45900 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.0e-11 73.2 72 48.6
C06p12830 Brassica napus HOM05D001285 ORTHO05D000199 1.3e-11 72.8 69 50.7
CARHR289190 Cardamine hirsuta HOM05D001285 ORTHO05D000199 1.3e-11 72.8 49 63.3
Carub.0027s0004 Capsella rubella HOM05D001285 ORTHO05D000199 2.2e-11 72.0 75 46.7
AL8G24550 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 2.9e-11 71.6 76 42.1
AL6G40760 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 5.0e-11 70.9 72 47.2
C03p64080 Brassica napus HOM05D001285 ORTHO05D000199 5.0e-11 70.9 71 49.3
Carub.0003s3058 Capsella rubella HOM05D001285 ORTHO05D000199 5.0e-11 70.9 69 44.9
AL5G16910 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 6.5e-11 70.5 69 44.9
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 6.5e-11 70.5 72 47.2
Thhalv10002320m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 6.5e-11 70.5 71 49.3
C05p42600 Brassica napus HOM05D004489 ORTHO05D000199 8.5e-11 70.1 69 49.3
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 8.5e-11 70.1 72 47.2
CARHR185190 Cardamine hirsuta HOM05D001285 ORTHO05D000199 1.1e-10 69.7 49 61.2
C09p23470 Brassica napus HOM05D001285 ORTHO05D000199 1.4e-10 69.3 69 49.3
CARHR153270 Cardamine hirsuta HOM05D001285 ORTHO05D000199 2.5e-10 68.6 50 56.0
Thhalv10009813m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.5e-10 68.6 59 47.5
AL4G20190 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 3.2e-10 68.2 72 47.2
Thhalv10015545m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.2e-10 68.2 73 43.8
AL1G65960 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 4.2e-10 67.8 72 45.8
C01p12180 Brassica napus HOM05D004489 ORTHO05D000199 5.5e-10 67.4 69 49.3
BraA01t02913Z Brassica rapa HOM05D004489 ORTHO05D021897 9.4e-10 66.6 47 61.7
AL6G42160 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.2e-09 66.2 72 44.4
Carub.0008s0707 Capsella rubella HOM05D001285 ORTHO05D000199 2.1e-09 65.5 75 41.3
BcaC05g30530 Brassica carinata HOM05D001285 ORTHO05D000199 2.7e-09 65.1 44 61.4
C03p36960 Brassica napus HOM05D001285 ORTHO05D000199 2.7e-09 65.1 44 61.4
C03p37020 Brassica napus HOM05D001285 ORTHO05D000199 2.7e-09 65.1 44 61.4
BcaB03g16504 Brassica carinata HOM05D001285 ORTHO05D000199 4.6e-09 64.3 77 51.9
Thhalv10002270m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 6.1e-09 63.9 63 47.6
C03p69080 Brassica napus HOM05D004489 ORTHO05D000199 3.9e-08 61.2 50 58.0
Thhalv10005449m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 6.7e-08 60.5 52 50.0
AT1G37020 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 8.8e-08 60.1 52 46.2
CARHR116190 Cardamine hirsuta HOM05D001285 ORTHO05D000199 1.5e-07 59.3 50 54.0
Thhalv10015694m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.0e-07 58.9 62 43.5
C05p11680 Brassica napus HOM05D001285 ORTHO05D000199 5.7e-07 57.4 46 56.5
BolC5t29915H Brassica oleracea HOM05D001285 ORTHO05D000199 5.7e-07 57.4 46 56.5
Carub.0003s2819 Capsella rubella HOM05D000471 ORTHO05D000199 5.7e-07 57.4 69 44.9
C04p39280 Brassica napus HOM05D000471 ORTHO05D000199 9.7e-07 56.6 59 45.8
BolC9t55313H Brassica oleracea HOM05D000471 ORTHO05D000199 1.7e-06 55.8 59 45.8
Thhalv10011096m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.7e-06 55.8 64 40.6
Thhalv10021955m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.7e-06 55.8 64 40.6
A05p29030 Brassica napus HOM05D000471 ORTHO05D000199 2.2e-06 55.5 59 45.8
A06p22860 Brassica napus HOM05D000471 ORTHO05D000199 2.2e-06 55.5 59 45.8
A07p12530 Brassica napus HOM05D000471 ORTHO05D000199 2.2e-06 55.5 59 45.8
C06p16640 Brassica napus HOM05D000471 ORTHO05D000199 2.2e-06 55.5 59 45.8
C08p09140 Brassica napus HOM05D000471 ORTHO05D000199 2.2e-06 55.5 59 45.8
C09p20800 Brassica napus HOM05D000471 ORTHO05D000199 2.2e-06 55.5 59 45.8
BolC9t54976H Brassica oleracea HOM05D000471 ORTHO05D000199 2.2e-06 55.5 59 45.8
BraA05t20103Z Brassica rapa HOM05D000471 ORTHO05D000199 2.2e-06 55.5 59 45.8
BraA08t33333Z Brassica rapa HOM05D000471 ORTHO05D000199 2.2e-06 55.5 59 45.8
BraA09t38317Z Brassica rapa HOM05D000471 ORTHO05D000199 2.2e-06 55.5 59 45.8
CARHR177560 Cardamine hirsuta HOM05D001285 ORTHO05D000199 2.2e-06 55.5 43 55.8
Thhalv10005571m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.2e-06 55.5 52 48.1
Oeu026437.1 Olea europaea HOM05D009665 ORTHO05D000397 2.2e-06 55.5 57 40.4
BolC2t07861H Brassica oleracea HOM05D001285 ORTHO05D000199 3.7e-06 54.7 34 67.6
Thhalv10000500m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.7e-06 54.7 59 49.2
Thhalv10019787m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.7e-06 54.7 52 51.9
Oeu005186.1 Olea europaea HOM05D000700 ORTHO05D000397 3.7e-06 54.7 69 34.8
Oeu009393.1 Olea europaea HOM05D009665 ORTHO05D011335 3.7e-06 54.7 57 40.4
Oeu032337.1 Olea europaea HOM05D000700 ORTHO05D000397 3.7e-06 54.7 69 34.8
Oeu032894.1 Olea europaea HOM05D000700 ORTHO05D000397 3.7e-06 54.7 69 34.8
Oeu037297.1 Olea europaea HOM05D000700 ORTHO05D000397 3.7e-06 54.7 69 34.8
C02p47380 Brassica napus HOM05D000471 ORTHO05D000199 4.8e-06 54.3 59 45.8
C06p09110 Brassica napus HOM05D000471 ORTHO05D000199 4.8e-06 54.3 59 44.1
BolC2t10781H Brassica oleracea HOM05D000471 ORTHO05D000199 4.8e-06 54.3 59 45.8
Thhalv10012192m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 4.8e-06 54.3 52 51.9
Oeu000458.1 Olea europaea HOM05D000700 ORTHO05D000397 4.8e-06 54.3 69 34.8
Oeu047270.2 Olea europaea HOM05D000700 ORTHO05D000397 4.8e-06 54.3 69 33.3
BolC8t47761H Brassica oleracea HOM05D000471 ORTHO05D000199 6.3e-06 53.9 55 47.3
Oeu040420.1 Olea europaea HOM05D000700 ORTHO05D000397 6.3e-06 53.9 53 41.5
C02p46450 Brassica napus HOM05D021134 ORTHO05D021924 8.2e-06 53.5 34 76.5
C04p15250 Brassica napus HOM05D021134 ORTHO05D021924 8.2e-06 53.5 34 76.5
C07p45150 Brassica napus HOM05D021134 ORTHO05D021924 8.2e-06 53.5 34 76.5
C09p39140 Brassica napus HOM05D010384 ORTHO05D013516 8.2e-06 53.5 50 50.0
BolC4t23096H Brassica oleracea HOM05D021134 ORTHO05D021924 8.2e-06 53.5 34 76.5
BolC9t56792H Brassica oleracea HOM05D010384 ORTHO05D021981 8.2e-06 53.5 50 50.0
BolC9t56793H Brassica oleracea HOM05D010384 ORTHO05D013516 8.2e-06 53.5 50 50.0
Thhalv10028191m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 8.2e-06 53.5 52 51.9


User provided reference genes

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