Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p16320 Brassica napus HOM05D021342 ORTHO05D024513 7.6e-56 220.3 116 100.0
BraA02t06690Z Brassica rapa HOM05D021342 ORTHO05D024513 7.6e-56 220.3 116 100.0
BolC2t08781H Brassica oleracea HOM05D021342 ORTHO05D024513 7.7e-48 193.7 116 89.7
C02p27250 Brassica napus HOM05D021342 ORTHO05D024513 4.2e-46 188.0 116 88.8
C02p27210 Brassica napus HOM05D021342 ORTHO05D024513 9.4e-46 186.8 116 87.9
Sp5g25180 Schrenkiella parvula HOM05D000629 ORTHO05D000576 2.7e-21 105.5 104 60.6
Thhalv10018014m.g Eutrema salsugineum HOM05D000629 ORTHO05D000576 1.4e-20 103.2 104 58.7
Aa31LG4G10820 Aethionema arabicum HOM05D000629 ORTHO05D000576 1.2e-19 100.1 109 56.9
AL2G29300 Arabidopsis lyrata HOM05D000629 ORTHO05D000576 1.2e-19 100.1 104 56.7
BcaC08g46454 Brassica carinata HOM05D000629 ORTHO05D000576 2.6e-19 99.0 100 60.0
A07p36470 Brassica napus HOM05D000629 ORTHO05D000576 2.6e-19 99.0 100 60.0
C06p43930 Brassica napus HOM05D000629 ORTHO05D000576 2.6e-19 99.0 100 60.0
BolC6t39465H Brassica oleracea HOM05D000629 ORTHO05D000576 2.6e-19 99.0 100 60.0
BraA07t31218Z Brassica rapa HOM05D000629 ORTHO05D000576 2.6e-19 99.0 100 60.0
BcaC08g45844 Brassica carinata HOM05D000629 ORTHO05D000576 1.3e-18 96.7 98 61.2
BolC6t38755H Brassica oleracea HOM05D000629 ORTHO05D000576 1.3e-18 96.7 98 61.2
BcaB03g15529 Brassica carinata HOM05D000629 ORTHO05D000576 1.7e-18 96.3 98 60.2
C06p36350 Brassica napus HOM05D000629 ORTHO05D000576 6.3e-18 94.4 91 63.7
Carub.0002s1673 Capsella rubella HOM05D000629 ORTHO05D000576 8.3e-18 94.0 98 56.1
A07p31240 Brassica napus HOM05D000629 ORTHO05D000576 1.1e-17 93.6 98 59.2
BraA07t30756Z Brassica rapa HOM05D000629 ORTHO05D000576 1.1e-17 93.6 98 59.2
AT1G70060 Arabidopsis thaliana HOM05D000629 ORTHO05D000576 1.4e-17 93.2 98 56.1
BcaB03g14783 Brassica carinata HOM05D000629 ORTHO05D000576 2.4e-17 92.4 100 56.0
AL1G38020 Arabidopsis lyrata HOM05D000629 ORTHO05D000576 8.5e-15 84.0 104 51.0
CARHR024590 Cardamine hirsuta HOM05D000629 ORTHO05D000576 1.6e-13 79.7 100 51.0
C02p27230 Brassica napus HOM05D021342 ORTHO05D102009 2.7e-13 79.0 65 69.2
Aa31LG7G7960 Aethionema arabicum HOM05D000629 ORTHO05D000576 1.4e-12 76.6 100 48.0
AL1G36780 Arabidopsis lyrata HOM05D000629 ORTHO05D000576 1.4e-12 76.6 100 50.0
Carub.0001s2368 Capsella rubella HOM05D000629 ORTHO05D000576 4.0e-12 75.1 100 51.0
AT1G24190 Arabidopsis thaliana HOM05D000629 ORTHO05D000576 1.2e-11 73.6 100 50.0
THA.LOC104822068 Tarenaya hassleriana HOM05D000629 ORTHO05D000576 9.8e-11 70.5 107 43.9
BcaC03g15153 Brassica carinata HOM05D000629 ORTHO05D000576 1.8e-09 66.2 70 58.6
BolC2t08785H Brassica oleracea HOM05D000629 ORTHO05D000576 1.6e-08 63.2 70 55.7
BolC2t08784H Brassica oleracea HOM05D001350 ORTHO05D001091 1.0e-07 60.5 53 64.2
THA.LOC104808829 Tarenaya hassleriana HOM05D000629 ORTHO05D000576 2.3e-07 59.3 45 66.7


User provided reference genes

Program Settings