Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p12570 Brassica napus HOM05D001038 ORTHO05D000395 2.3e-51 205.3 105 100.0
BraA09t36747Z Brassica rapa HOM05D001038 ORTHO05D000395 2.2e-38 162.2 114 73.7
BraA05t21246Z Brassica rapa HOM05D001038 ORTHO05D000395 1.9e-37 159.1 110 74.5
BraA06t25652Z Brassica rapa HOM05D001038 ORTHO05D000395 3.5e-31 138.3 106 67.9
BraA06t25335Z Brassica rapa HOM05D001038 ORTHO05D000395 5.9e-31 137.5 106 67.9
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-29 133.3 160 50.0
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-28 129.4 190 43.2
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 1.6e-28 129.4 190 43.2
BraA07t28816Z Brassica rapa HOM05D001038 ORTHO05D000395 1.6e-28 129.4 190 43.7
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 2.7e-28 128.6 190 44.2
BolC7t40990H Brassica oleracea HOM05D001957 ORTHO05D002015 3.6e-28 128.3 141 50.4
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 8.8e-27 123.6 190 41.1
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-25 119.8 177 41.2
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 3.7e-25 118.2 190 41.1
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-24 115.9 190 38.9
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-23 112.5 77 68.8
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 3.8e-22 108.2 190 36.3
BcaC06g34271 Brassica carinata HOM05D001038 ORTHO05D000395 5.0e-22 107.8 190 36.3
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 6.5e-22 107.5 190 37.4
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 6.5e-22 107.5 114 57.0
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 8.5e-22 107.1 173 41.6
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 8.5e-22 107.1 190 36.8
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 8.5e-22 107.1 173 41.6
BraA08t34502Z Brassica rapa HOM05D001038 ORTHO05D000395 1.9e-21 105.9 124 48.4
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 5.5e-21 104.4 190 36.3
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 7.2e-21 104.0 104 55.8
A04p08060 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-20 103.2 76 67.1
BraA03t13820Z Brassica rapa HOM05D001038 ORTHO05D000395 1.6e-20 102.8 105 55.2
BcaB08g36368 Brassica carinata HOM05D001038 ORTHO05D000395 8.0e-20 100.5 77 63.6
C01p43390 Brassica napus HOM05D001038 ORTHO05D024222 1.8e-19 99.4 85 60.0
BolC5t30492H Brassica oleracea HOM05D001038 ORTHO05D000395 1.8e-19 99.4 72 69.4
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 5.7e-18 94.4 76 63.2
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 5.7e-18 94.4 190 34.2
C07p12210 Brassica napus HOM05D001038 ORTHO05D040877 9.8e-18 93.6 105 50.5
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-17 92.4 76 56.6
BolC2t11144H Brassica oleracea HOM05D001038 ORTHO05D040877 2.8e-17 92.0 105 49.5
BcaB01g00119 Brassica carinata HOM05D001038 ORTHO05D000395 8.3e-17 90.5 94 50.0
BraA06t25413Z Brassica rapa HOM05D001038 ORTHO05D000395 1.1e-16 90.1 56 76.8
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-16 89.7 76 57.9
C09p45390 Brassica napus HOM05D001038 ORTHO05D024072 1.4e-16 89.7 127 43.3
BolC4t26208H Brassica oleracea HOM05D001038 ORTHO05D000395 1.8e-16 89.4 76 57.9
BcaB01g01124 Brassica carinata HOM05D001038 ORTHO05D000395 3.1e-16 88.6 76 59.2
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 3.1e-16 88.6 76 57.9
BcaB07g31487 Brassica carinata HOM05D001038 ORTHO05D000395 3.1e-16 88.6 177 33.9
C03p52030 Brassica napus HOM05D001038 ORTHO05D000395 3.1e-16 88.6 104 47.1
BolC3t17485H Brassica oleracea HOM05D001038 ORTHO05D000395 3.1e-16 88.6 104 47.1
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 4.1e-16 88.2 190 33.2
BcaC04g23074 Brassica carinata HOM05D001038 ORTHO05D019962 4.1e-16 88.2 76 56.6
C03p74230 Brassica napus HOM05D001038 ORTHO05D000395 5.4e-16 87.8 76 55.3
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 1.6e-15 86.3 69 59.4
C07p18280 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-15 86.3 161 35.4
BolC3t19681H Brassica oleracea HOM05D001038 ORTHO05D000395 1.6e-15 86.3 76 53.9
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-15 85.9 80 51.2
BraA05t20013Z Brassica rapa HOM05D001038 ORTHO05D000395 2.7e-15 85.5 76 55.3
BraA06t25409Z Brassica rapa HOM05D001038 ORTHO05D000395 3.5e-15 85.1 161 35.4
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 4.5e-15 84.7 76 55.3
A03p30780 Brassica napus HOM05D001038 ORTHO05D000395 4.5e-15 84.7 75 56.0
BolC7t42338H Brassica oleracea HOM05D001038 ORTHO05D000395 4.5e-15 84.7 161 34.8
BcaC08g43120 Brassica carinata HOM05D001038 ORTHO05D032078 5.9e-15 84.3 77 51.9
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 7.7e-15 84.0 69 59.4
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 7.7e-15 84.0 56 69.6
C02p45440 Brassica napus HOM05D001038 ORTHO05D000395 7.7e-15 84.0 57 68.4
C03p47220 Brassica napus HOM05D001038 ORTHO05D000395 7.7e-15 84.0 58 72.4
BcaB04g19295 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-14 83.6 76 59.2
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 1.3e-14 83.2 76 53.9
C09p39690 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-14 83.2 76 53.9
BolC9t56849H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-14 83.2 76 53.9
BraA03t12256Z Brassica rapa HOM05D001038 ORTHO05D000395 1.3e-14 83.2 75 54.7
BraA04t16796Z Brassica rapa HOM05D001038 ORTHO05D000395 2.2e-14 82.4 76 53.9
BcaC03g15415 Brassica carinata HOM05D001038 ORTHO05D000395 3.8e-14 81.6 76 53.9
BcaC01g02304 Brassica carinata HOM05D001038 ORTHO05D000395 5.0e-14 81.3 56 67.9
C03p66800 Brassica napus HOM05D001038 ORTHO05D000395 5.0e-14 81.3 56 67.9
BcaB08g35415 Brassica carinata HOM05D001038 ORTHO05D000395 6.5e-14 80.9 75 52.0
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 8.5e-14 80.5 135 39.3
BcaB02g07256 Brassica carinata HOM05D001038 ORTHO05D024222 1.5e-13 79.7 74 54.1
C04p46240 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-13 79.7 80 57.5
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 1.5e-13 79.7 135 38.5
BraA05t20300Z Brassica rapa HOM05D001038 ORTHO05D000395 1.9e-13 79.3 166 33.7
BraA02t08904Z Brassica rapa HOM05D001038 ORTHO05D000395 2.5e-13 79.0 105 44.8
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 3.2e-13 78.6 72 52.8
BolC7t41409H Brassica oleracea HOM05D001038 ORTHO05D000395 3.2e-13 78.6 160 34.4
C09p50150 Brassica napus HOM05D001038 ORTHO05D000395 7.2e-13 77.4 56 64.3
BcaC04g19884 Brassica carinata HOM05D001038 ORTHO05D000395 9.5e-13 77.0 84 48.8
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 9.5e-13 77.0 76 50.0
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 9.5e-13 77.0 166 33.1
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 9.5e-13 77.0 76 50.0
BcaC01g03478 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-12 76.6 58 62.1
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 2.7e-12 75.5 155 31.0
BcaC05g27733 Brassica carinata HOM05D001038 ORTHO05D000395 4.7e-12 74.7 58 60.3
C05p37210 Brassica napus HOM05D001038 ORTHO05D000395 4.7e-12 74.7 58 60.3
BraSC36t46105Z Brassica rapa HOM05D001038 ORTHO05D000395 4.7e-12 74.7 61 57.4
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 8.0e-12 73.9 152 32.2
BcaB07g32736 Brassica carinata HOM05D001038 ORTHO05D024484 1.0e-11 73.6 70 50.0
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 1.0e-11 73.6 79 48.1
BcaB05g23513 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-11 72.8 56 60.7
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-11 72.4 65 53.8
BraA04t18197Z Brassica rapa HOM05D001038 ORTHO05D000395 2.3e-11 72.4 63 54.0
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 3.0e-11 72.0 62 50.0
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 3.0e-11 72.0 62 50.0
C05p36690 Brassica napus HOM05D001038 ORTHO05D000395 6.8e-11 70.9 66 48.5
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 6.8e-11 70.9 67 46.3
BcaB01g01350 Brassica carinata HOM05D001038 ORTHO05D000395 8.8e-11 70.5 55 58.2
A06p26760 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-10 70.1 64 48.4
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 1.2e-10 70.1 66 48.5
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 1.2e-10 70.1 62 48.4
BNapus_Darmor_BZH_scaffold_104p00080 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-10 69.7 61 54.1
C08p27920 Brassica napus HOM05D001038 ORTHO05D018639 2.0e-10 69.3 59 57.6
BolC7t43509H Brassica oleracea HOM05D001038 ORTHO05D000395 2.0e-10 69.3 56 57.1
A06p16020 Brassica napus HOM05D001038 ORTHO05D024222 2.6e-10 68.9 60 60.0
A06p36110 Brassica napus HOM05D001038 ORTHO05D024222 2.6e-10 68.9 60 60.0
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 3.4e-10 68.6 151 29.1
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 3.4e-10 68.6 62 50.0
BolC3t16999H Brassica oleracea HOM05D001038 ORTHO05D018639 3.4e-10 68.6 57 56.1
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 3.4e-10 68.6 151 29.1
BolC7t41881H Brassica oleracea HOM05D001038 ORTHO05D000395 4.4e-10 68.2 56 55.4
BcaC09g50083 Brassica carinata HOM05D001038 ORTHO05D000395 5.7e-10 67.8 64 50.0
BcaB01g02362 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-09 66.6 148 29.1
A09p58370 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-09 66.6 60 50.0
BolC6t38914H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-09 66.6 110 40.9
BraA06t24005Z Brassica rapa HOM05D001038 ORTHO05D000395 2.2e-09 65.9 52 53.8
BolC8t47295H Brassica oleracea HOM05D001038 ORTHO05D000395 2.8e-09 65.5 52 59.6
C06p00860 Brassica napus HOM05D001038 ORTHO05D000395 3.7e-09 65.1 60 48.3
BolC3t16968H Brassica oleracea HOM05D001038 ORTHO05D000395 3.7e-09 65.1 60 48.3
BolC6t36762H Brassica oleracea HOM05D001038 ORTHO05D000395 3.7e-09 65.1 59 50.8
BraA08t32580Z Brassica rapa HOM05D001038 ORTHO05D000395 3.7e-09 65.1 56 53.6
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 4.9e-09 64.7 56 53.6
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 4.9e-09 64.7 56 53.6
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 8.3e-09 63.9 70 48.6
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 8.3e-09 63.9 70 48.6
A06p28660 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-08 63.5 55 52.7
BolC2t07185H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-08 63.5 52 53.8
BolC3t20321H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-08 63.5 60 46.7
BraA06t25806Z Brassica rapa HOM05D001038 ORTHO05D000395 1.1e-08 63.5 55 52.7
C06p38180 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-08 63.2 69 49.3
BraA04t16612Z Brassica rapa HOM05D001038 ORTHO05D018639 1.8e-08 62.8 66 50.0
BcaB06g28671 Brassica carinata HOM05D001038 ORTHO05D018639 2.4e-08 62.4 57 52.6
BolC4t27362H Brassica oleracea HOM05D001038 ORTHO05D000395 2.4e-08 62.4 56 53.6
BolC8t49550H Brassica oleracea HOM05D001038 ORTHO05D000395 2.4e-08 62.4 52 55.8
BcaC06g35714 Brassica carinata HOM05D001038 ORTHO05D000395 4.1e-08 61.6 68 48.5
C07p11750 Brassica napus HOM05D001038 ORTHO05D000395 4.1e-08 61.6 68 48.5
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 5.4e-08 61.2 56 50.0
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 5.4e-08 61.2 56 50.0
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 7.0e-08 60.8 58 53.4
BcaB06g28542 Brassica carinata HOM05D001038 ORTHO05D000395 7.0e-08 60.8 57 45.6
C09p68940 Brassica napus HOM05D001038 ORTHO05D000395 7.0e-08 60.8 56 50.0
BolC5t34489H Brassica oleracea HOM05D001038 ORTHO05D000395 7.0e-08 60.8 57 45.6
BolC7t41648H Brassica oleracea HOM05D001038 ORTHO05D000395 7.0e-08 60.8 68 47.1
BcaNung02282 Brassica carinata HOM05D001038 ORTHO05D000395 9.2e-08 60.5 56 50.0
C04p37080 Brassica napus HOM05D034669 ORTHO05D000395 9.2e-08 60.5 45 64.4
BolC7t41662H Brassica oleracea HOM05D001038 ORTHO05D031981 9.2e-08 60.5 60 48.3
BolC7t44786H Brassica oleracea HOM05D001038 ORTHO05D000395 9.2e-08 60.5 56 50.0
BolC4t23574H Brassica oleracea HOM05D001038 ORTHO05D000395 1.6e-07 59.7 60 50.0
BcaC06g32026 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-07 59.3 62 51.6
C07p21840 Brassica napus HOM05D001038 ORTHO05D101227 2.0e-07 59.3 28 100.0
C08p05950 Brassica napus HOM05D001038 ORTHO05D000395 2.0e-07 59.3 69 47.8
C09p37880 Brassica napus HOM05D001038 ORTHO05D000395 2.7e-07 58.9 55 45.5
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 2.7e-07 58.9 55 45.5
BcaB01g03119 Brassica carinata HOM05D001038 ORTHO05D018639 3.5e-07 58.5 60 48.3
BcaC07g37226 Brassica carinata HOM05D000048 ORTHO05D002390 3.5e-07 58.5 56 50.0
A07p11770 Brassica napus HOM05D001038 ORTHO05D018639 3.5e-07 58.5 51 54.9
BolC4t24024H Brassica oleracea HOM05D001038 ORTHO05D000395 3.5e-07 58.5 56 53.6
BraA07t28962Z Brassica rapa HOM05D001038 ORTHO05D018639 3.5e-07 58.5 51 54.9
BcaC01g04980 Brassica carinata HOM05D001038 ORTHO05D000395 4.5e-07 58.2 57 45.6
A07p30050 Brassica napus HOM05D001038 ORTHO05D000395 5.9e-07 57.8 55 41.8
BraA04t18267Z Brassica rapa HOM05D001038 ORTHO05D021830 5.9e-07 57.8 48 54.2
BraA07t29115Z Brassica rapa HOM05D001038 ORTHO05D000395 5.9e-07 57.8 54 57.4
BcaB05g21586 Brassica carinata HOM05D001038 ORTHO05D000395 7.7e-07 57.4 56 42.9
BcaB08g34364 Brassica carinata HOM05D001038 ORTHO05D000395 7.7e-07 57.4 56 44.6
BcaC09g51594 Brassica carinata HOM05D001038 ORTHO05D021830 7.7e-07 57.4 51 52.9
C01p11670 Brassica napus HOM05D001038 ORTHO05D021830 7.7e-07 57.4 51 52.9
BolC1t01131H Brassica oleracea HOM05D001038 ORTHO05D021830 7.7e-07 57.4 51 52.9
BraA04t17286Z Brassica rapa HOM05D001038 ORTHO05D021830 1.0e-06 57.0 48 54.2
C07p60310 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-06 56.6 57 43.9
BraA02t08028Z Brassica rapa HOM05D001038 ORTHO05D024222 1.7e-06 56.2 43 62.8
BcaB01g01530 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-06 55.8 56 41.1
C09p69750 Brassica napus HOM05D001038 ORTHO05D017617 2.3e-06 55.8 138 24.6
BcaB01g02419 Brassica carinata HOM05D001038 ORTHO05D018639 2.9e-06 55.5 60 46.7
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 2.9e-06 55.5 29 89.7
A04p08290 Brassica napus HOM05D001038 ORTHO05D024484 3.8e-06 55.1 49 55.1
C05p34660 Brassica napus HOM05D001038 ORTHO05D000395 3.8e-06 55.1 152 25.7
BolC1t01148H Brassica oleracea HOM05D001038 ORTHO05D000395 3.8e-06 55.1 139 23.7
BolC1t03990H Brassica oleracea HOM05D001038 ORTHO05D000395 3.8e-06 55.1 60 40.0
A10p07420 Brassica napus HOM05D001038 ORTHO05D000395 6.6e-06 54.3 29 89.7
C04p42380 Brassica napus HOM05D001038 ORTHO05D000395 6.6e-06 54.3 49 51.0
BolC5t33734H Brassica oleracea HOM05D001038 ORTHO05D000395 8.6e-06 53.9 110 36.4
BolC9t55140H Brassica oleracea HOM05D001038 ORTHO05D000395 8.6e-06 53.9 138 23.9
BraA03t11730Z Brassica rapa HOM05D001038 ORTHO05D000395 8.6e-06 53.9 52 42.3


User provided reference genes

Program Settings