Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 4.8e-200 701.0 378 100.0
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 7.7e-198 693.7 378 98.9
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 1.7e-184 649.4 380 93.4
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 1.1e-167 593.6 379 86.0
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 2.4e-167 592.4 379 86.0
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 1.6e-166 589.7 390 84.1
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 1.8e-162 576.2 382 83.0
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 1.8e-162 576.2 382 83.0
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 5.2e-162 574.7 380 84.7
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 1.3e-160 570.1 394 82.0
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 2.4e-159 565.8 395 81.8
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 4.6e-158 561.6 386 84.2
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 1.3e-157 560.1 394 80.5
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 1.9e-156 556.2 391 80.6
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 2.7e-150 535.8 393 77.1
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 2.5e-148 529.3 385 76.4
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 5.2e-138 495.0 305 87.9
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 1.2e-126 457.2 381 67.2
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 3.5e-126 455.7 375 66.7
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 7.8e-126 454.5 315 76.8
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 1.3e-125 453.8 367 69.2
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 9.6e-124 447.6 380 67.1
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 8.1e-123 444.5 377 66.8
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 1.4e-122 443.7 322 75.2
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 1.8e-122 443.4 328 73.8
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 3.1e-122 442.6 325 75.4
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 5.3e-122 441.8 322 73.9
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 6.9e-122 441.4 323 74.6
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 6.9e-122 441.4 321 74.1
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 1.2e-121 440.7 323 75.5
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 1.5e-121 440.3 321 73.2
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 4.5e-121 438.7 323 74.3
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 4.5e-121 438.7 376 64.9
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 7.6e-121 438.0 315 74.9
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 1.7e-120 436.8 267 84.6
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 2.2e-120 436.4 331 73.1
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 2.2e-120 436.4 326 71.5
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 2.9e-120 436.0 338 71.0
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 2.9e-120 436.0 360 66.9
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 6.4e-120 434.9 320 75.3
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 8.4e-120 434.5 333 70.3
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 1.9e-119 433.3 375 66.4
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 2.4e-119 433.0 374 66.3
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 2.4e-119 433.0 374 66.3
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 2.4e-119 433.0 367 67.6
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 4.2e-119 432.2 384 63.8
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 5.4e-119 431.8 374 66.3
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 7.1e-119 431.4 324 72.2
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.6e-118 430.3 374 66.3
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 1.6e-118 430.3 377 62.6
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 4.6e-118 428.7 266 83.8
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 2.3e-117 426.4 329 71.1
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 6.7e-117 424.9 324 71.3
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 8.7e-117 424.5 300 75.0
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 2.5e-116 422.9 258 84.1
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 4.3e-116 422.2 326 69.9
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 7.4e-116 421.4 336 68.8
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 1.3e-115 420.6 328 69.2
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 1.3e-115 420.6 270 79.6
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 2.8e-115 419.5 400 61.5
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 3.6e-115 419.1 300 73.7
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 4.8e-115 418.7 267 79.8
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 6.2e-115 418.3 380 62.6
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.4e-114 417.2 258 82.2
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 1.4e-114 417.2 354 65.0
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 6.9e-114 414.8 267 79.8
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 6.9e-114 414.8 302 73.5
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 1.2e-113 414.1 268 80.2
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 2.6e-113 412.9 280 76.1
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 1.3e-112 410.6 306 70.6
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 1.3e-112 410.6 370 63.0
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 1.7e-112 410.2 270 77.4
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 2.2e-112 409.8 316 69.3
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 2.9e-112 409.5 271 79.3
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 1.1e-111 407.5 350 64.6
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 1.4e-111 407.1 268 79.9
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 7.1e-111 404.8 337 65.9
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 2.7e-110 402.9 334 66.2
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 1.6e-107 393.7 348 61.8
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 4.8e-107 392.1 385 59.5
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 3.4e-105 386.0 344 66.6
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 5.8e-105 385.2 309 64.7
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 1.0e-104 384.4 328 68.3
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 4.2e-103 379.0 315 66.0
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 4.2e-103 379.0 244 79.5
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 5.5e-103 378.6 268 71.3
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 1.6e-102 377.1 268 70.9
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 2.5e-100 369.8 236 80.5
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 5.7e-100 368.6 269 72.1
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 7.4e-100 368.2 306 64.1
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 1.7e-96 357.1 406 53.0
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 1.1e-95 354.4 411 51.8
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 1.1e-95 354.4 271 67.5
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 3.2e-95 352.8 390 53.8
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 2.7e-94 349.7 266 68.8
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 1.8e-93 347.1 335 62.1
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 5.1e-93 345.5 261 69.0
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 1.3e-91 340.9 272 63.6
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 1.3e-91 340.9 327 61.5
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 5.3e-90 335.5 309 64.4
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 4.5e-89 332.4 205 82.9
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 4.2e-87 325.9 231 73.6
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 3.0e-85 319.7 236 72.5
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 1.3e-83 314.3 237 69.2
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 5.5e-79 298.9 286 63.3
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 9.4e-79 298.1 176 87.5
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 1.8e-77 293.9 363 53.7
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 1.6e-73 280.8 263 57.0
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 1.6e-73 280.8 263 57.0
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 7.7e-73 278.5 356 51.4
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 1.9e-71 273.9 263 58.9
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 6.7e-69 265.4 274 53.3
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 2.8e-67 260.0 188 70.2
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 1.9e-63 247.3 157 79.6
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 6.8e-61 238.8 261 56.3
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 2.6e-60 236.9 263 49.8
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 2.2e-59 233.8 269 52.8
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.4e-53 214.5 129 84.5
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 6.8e-53 212.2 130 82.3
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 7.8e-49 198.7 208 54.8
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 4.7e-46 189.5 114 88.6
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 4.6e-41 172.9 105 79.0
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 3.3e-39 166.8 257 40.9
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 2.9e-27 127.1 180 42.2
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 3.5e-25 120.2 187 38.0
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 1.3e-24 118.2 82 76.8
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 2.5e-23 114.0 90 66.7
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 7.6e-12 75.9 41 95.1
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 7.6e-12 75.9 38 97.4
Actinidia19728 Actinidia chinensis HOM05D005749 ORTHO05D007208 5.4e-10 69.7 149 34.9
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 2.7e-09 67.4 245 25.3
CBR_g41620 Chara braunii HOM05D005749 ORTHO05D007208 2.3e-08 64.3 57 56.1
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 6.6e-08 62.8 36 83.3


User provided reference genes

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