Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p37130 Brassica napus HOM05D006827 ORTHO05D008725 9.3e-125 450.7 309 100.0
BraA01t03774Z Brassica rapa HOM05D006827 ORTHO05D008725 1.1e-122 443.7 234 96.2
BcaC09g48673 Brassica carinata HOM05D006827 ORTHO05D008725 2.8e-121 439.1 309 87.4
BcaC09g48674 Brassica carinata HOM05D006827 ORTHO05D008725 2.8e-121 439.1 309 86.1
C01p47070 Brassica napus HOM05D006827 ORTHO05D008725 2.8e-121 439.1 309 87.4
BolC1t04673H Brassica oleracea HOM05D006827 ORTHO05D008725 1.4e-120 436.8 309 87.1
BcaB04g20857 Brassica carinata HOM05D006827 ORTHO05D008725 3.2e-117 425.6 234 93.6
Sp3g15370 Schrenkiella parvula HOM05D006827 ORTHO05D008725 3.9e-115 418.7 234 92.3
Thhalv10021204m.g Eutrema salsugineum HOM05D006827 ORTHO05D008725 5.3e-112 408.3 234 91.9
AL3G30170 Arabidopsis lyrata HOM05D006827 ORTHO05D008725 9.9e-111 404.1 230 91.7
AT3G17170 Arabidopsis thaliana HOM05D006827 ORTHO05D008725 7.1e-109 397.9 230 90.4
CARHR092440 Cardamine hirsuta HOM05D006827 ORTHO05D008725 2.7e-108 396.0 230 85.7
Carub.0003s1692 Capsella rubella HOM05D006827 ORTHO05D008725 3.9e-107 392.1 230 87.8
Aa31LG8G4170 Aethionema arabicum HOM05D006827 ORTHO05D008725 2.0e-103 379.8 234 82.5
THA.LOC104820318 Tarenaya hassleriana HOM05D006827 ORTHO05D008725 2.1e-92 343.2 234 73.5
Gohir.A10G174600 Gossypium hirsutum HOM05D006827 ORTHO05D008725 3.9e-75 285.8 240 63.3
Thecc.04G305900 Theobroma cacao HOM05D006827 ORTHO05D008725 3.9e-75 285.8 242 64.0
DCAR_023373 Daucus carota HOM05D006827 ORTHO05D008725 5.1e-75 285.4 251 62.9
Gorai.011G202600 Gossypium raimondii HOM05D006827 ORTHO05D008725 1.1e-74 284.3 240 62.9
Manes.03G207700 Manihot esculenta HOM05D006827 ORTHO05D008725 1.1e-74 284.3 176 77.8
COL.COLO4_34569 Corchorus olitorius HOM05D001281 ORTHO05D001139 7.4e-74 281.6 236 64.8
TWI53G1816 Tripterygium wilfordii HOM05D006827 ORTHO05D008725 2.2e-73 280.0 240 60.0
Cc03_g00540 Coffea canephora HOM05D006827 ORTHO05D008725 2.8e-73 279.6 244 59.8
Duzib212G0426 Durio zibethinus HOM05D006827 ORTHO05D008725 2.8e-73 279.6 238 64.7
Nitab4.5_0002421g0010 Nicotiana tabacum HOM05D006827 ORTHO05D008725 3.7e-73 279.3 176 77.3
Gohir.D10G181100 Gossypium hirsutum HOM05D006827 ORTHO05D008725 6.3e-73 278.5 240 61.7
MD13G1149000 Malus domestica HOM05D006827 ORTHO05D008725 6.3e-73 278.5 175 75.4
Potri.008G101900 Populus trichocarpa HOM05D006827 ORTHO05D008725 6.3e-73 278.5 175 75.4
GSVIVG01034952001 Vitis vinifera HOM05D006827 ORTHO05D008725 6.3e-73 278.5 176 75.6
CiPaw.01G134600 Carya illinoinensis HOM05D006827 ORTHO05D008725 1.4e-72 277.3 176 77.3
Nitab4.5_0004047g0010 Nicotiana tabacum HOM05D006827 ORTHO05D008725 1.4e-72 277.3 176 76.1
TAR365G1248 Trochodendron aralioides HOM05D006827 ORTHO05D008725 1.4e-72 277.3 176 75.6
CANSAT78G0077 Cannabis sativa HOM05D006827 ORTHO05D008725 1.8e-72 276.9 177 75.1
Prupe.1G113000 Prunus persica HOM05D006827 ORTHO05D008725 1.8e-72 276.9 175 77.1
Actinidia31567 Actinidia chinensis HOM05D006827 ORTHO05D008725 4.1e-72 275.8 176 74.4
Ah.13g071520 Amaranthus hybridus HOM05D006827 ORTHO05D008725 7.0e-72 275.0 174 74.7
Dinv15137 Davidia involucrata HOM05D006827 ORTHO05D008725 7.0e-72 275.0 176 74.4
Sopen01g023660 Solanum pennellii HOM05D006827 ORTHO05D008725 1.0e-70 271.2 176 75.0
Oeu014225.1 Olea europaea HOM05D006827 ORTHO05D008725 1.7e-70 270.4 175 73.1
PSO210G0119 Papaver somniferum HOM05D006827 ORTHO05D008725 2.2e-70 270.0 176 72.7
Solyc01g058190.4 Solanum lycopersicum HOM05D006827 ORTHO05D008725 2.2e-70 270.0 176 74.4
PSO761G0463 Papaver somniferum HOM05D006827 ORTHO05D008725 2.9e-70 269.6 176 72.7
PGSC0003DMG400015968 Solanum tuberosum HOM05D006827 ORTHO05D008725 5.0e-70 268.9 238 58.8
EL10Ac3g05552 Beta vulgaris HOM05D006827 ORTHO05D008725 8.5e-70 268.1 230 59.1
Hma1.2p1_0516F.1_g170510 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 8.5e-70 268.1 199 69.8
MSTRG.3845 Avicennia marina HOM05D006827 ORTHO05D008725 1.5e-69 267.3 176 72.7
Nn3g21791 Nelumbo nucifera HOM05D006827 ORTHO05D008725 1.5e-69 267.3 176 72.7
unitig_88.g27700 Utricularia gibba HOM05D006827 ORTHO05D008725 2.5e-69 266.5 199 65.8
CAN.G281.10 Capsicum annuum HOM05D006827 ORTHO05D008725 4.2e-69 265.8 245 60.4
RcHm_v2.0_Chr4g0426061 Rosa chinensis HOM05D006827 ORTHO05D008725 4.2e-69 265.8 175 72.6
arahy.Tifrunner.gnm1.ann1.W8AIPN Arachis hypogaea HOM05D006827 ORTHO05D008725 9.4e-69 264.6 216 62.0
FvH4_4g20660 Fragaria vesca HOM05D006827 ORTHO05D008725 1.2e-68 264.2 175 71.4
FAN12G3056 Fragaria x ananassa HOM05D006827 ORTHO05D008725 1.2e-68 264.2 175 71.4
MBI18_g27379_MAGBIO Magnolia biondii HOM05D006827 ORTHO05D008725 1.2e-68 264.2 195 66.2
arahy.Tifrunner.gnm1.ann1.7T6EZL Arachis hypogaea HOM05D006827 ORTHO05D008725 1.6e-68 263.8 216 62.0
QL06p013028 Quercus lobata HOM05D006827 ORTHO05D008725 2.7e-68 263.1 195 68.2
AUR62016245 Chenopodium quinoa HOM05D002153 ORTHO05D002137 3.6e-68 262.7 176 69.3
Sed0009970 Sechium edule HOM05D006827 ORTHO05D008725 3.6e-68 262.7 176 71.6
ClCG06G004410 Citrullus lanatus HOM05D006827 ORTHO05D008725 4.7e-68 262.3 176 72.2
Migut.N00027 Erythranthe guttata HOM05D006827 ORTHO05D008725 4.7e-68 262.3 196 64.8
HanXRQChr05g0148611 Helianthus annuus HOM05D006827 ORTHO05D008725 6.1e-68 261.9 176 73.9
PGR031G1277 Punica granatum HOM05D006827 ORTHO05D008725 6.1e-68 261.9 176 71.0
Ca_00959_v3 Cicer arietinum L. HOM05D006827 ORTHO05D008725 1.0e-67 261.2 176 70.5
ECA246G4663 Erigeron canadensis HOM05D002153 ORTHO05D002137 1.0e-67 261.2 176 72.7
TPR.G33906 Trifolium pratense HOM05D006827 ORTHO05D008725 1.0e-67 261.2 227 59.5
TWI09G0591 Tripterygium wilfordii HOM05D006827 ORTHO05D008725 1.0e-67 261.2 195 66.2
FAN07G0118 Fragaria x ananassa HOM05D006827 ORTHO05D008725 1.8e-67 260.4 181 69.6
Lsat_1_v5_gn_6_116121 Lactuca sativa HOM05D006827 ORTHO05D008725 1.8e-67 260.4 176 72.7
MELO3C021255.2 Cucumis melo HOM05D006827 ORTHO05D008725 3.0e-67 259.6 231 61.0
Cfa015277 Carpinus fangiana HOM05D006827 ORTHO05D008725 4.0e-67 259.2 199 66.3
Lj6g0001147 Lotus japonicus HOM05D001281 ORTHO05D001139 4.0e-67 259.2 176 69.9
Medtr2g033490 Medicago truncatula HOM05D006827 ORTHO05D008725 1.1e-66 257.7 176 70.5
Glyma.15G137900 Glycine max HOM05D006827 ORTHO05D008725 2.6e-66 256.5 220 59.1
SGA_v2.0_scaffold227G43227 Striga asiatica HOM05D006827 ORTHO05D008725 3.3e-66 256.1 175 71.4
Phvul.006G120200 Phaseolus vulgaris HOM05D006827 ORTHO05D008725 5.7e-66 255.4 200 62.0
Sabra08G0077100 Salix brachista HOM05D006827 ORTHO05D007631 5.7e-66 255.4 185 68.6
Aqoxy2G02656 Aquilegia oxysepala HOM05D006827 ORTHO05D008725 1.3e-65 254.2 163 74.8
Sc25g0003190 Simmondsia chinensis HOM05D006827 ORTHO05D008725 2.2e-65 253.4 175 68.0
Lj3A834T69 Lonicera japonica HOM05D006827 ORTHO05D008725 6.3e-65 251.9 171 69.6
Glyma.09G032900 Glycine max HOM05D001281 ORTHO05D008725 1.4e-64 250.8 176 66.5
VMungo0540G1290 Vigna mungo HOM05D006827 ORTHO05D008725 1.8e-64 250.4 176 65.9
Ciclev10005460m.g Citrus clementina HOM05D006827 ORTHO05D008725 3.1e-64 249.6 170 71.2
arahy.Tifrunner.gnm1.ann1.GV6LK0 Arachis hypogaea HOM05D006827 ORTHO05D008725 7.0e-64 248.4 216 60.2
Eucgr.B03980 Eucalyptus grandis HOM05D006827 ORTHO05D008725 1.6e-63 247.3 168 72.0
Hund11994 Selenicereus undatus HOM05D006827 ORTHO05D008725 7.7e-63 245.0 168 71.4
Os12g0563200 Oryza sativa ssp. japonica HOM05D006827 ORTHO05D008725 1.3e-62 244.2 172 65.7
QL03p023650 Quercus lobata HOM05D006827 ORTHO05D008725 2.2e-62 243.4 238 55.5
ATR1120G107 Amborella trichopoda HOM05D006827 ORTHO05D008725 5.0e-62 242.3 201 60.7
Rhsim04G0242100 Rhododendron simsii HOM05D006827 ORTHO05D008725 6.5e-62 241.9 222 60.4
Haze_01351 Corylus avellana HOM05D002153 ORTHO05D002137 1.1e-61 241.1 246 55.3
Zm00001eb136900 Zea mays HOM05D006827 ORTHO05D008725 2.5e-61 240.0 172 64.5
Psat1g161800 Pisum sativum HOM05D006827 ORTHO05D008725 7.2e-61 238.4 162 69.1
HPP92_027958 Vanilla planifolia HOM05D006827 ORTHO05D008725 7.2e-61 238.4 223 57.0
CAN.G582.1 Capsicum annuum HOM05D006827 ORTHO05D008725 2.7e-60 236.5 176 68.2
Lalb_Chr18g0058551 Lupinus albus HOM05D006827 ORTHO05D008725 1.4e-59 234.2 162 67.9
Peaxi162Scf00228g00735 Petunia axillaris HOM05D006827 ORTHO05D008725 8.3e-57 224.9 149 73.2
vmacro07963 Vaccinium macrocarpon HOM05D006827 ORTHO05D008725 2.5e-53 213.4 150 70.7
CsaV3_UNG230110 Cucumis sativus L. HOM05D006827 ORTHO05D008725 3.2e-53 213.0 166 66.3
CsaV3_6G028440 Cucumis sativus L. HOM05D006827 ORTHO05D008725 8.3e-49 198.4 253 48.6
Atru.chr4.3069 Acer truncatum HOM05D006827 ORTHO05D008725 1.1e-45 188.0 118 77.1
MD16G1149200 Malus domestica HOM05D006827 ORTHO05D008725 2.8e-44 183.3 119 73.9
BcaC05g28821 Brassica carinata HOM05D006827 ORTHO05D023991 3.6e-44 183.0 168 67.9
Hma1.2p1_0013F.1_g008250 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 3.6e-44 183.0 115 75.7
arahy.Tifrunner.gnm1.ann1.25F6GK Arachis hypogaea HOM05D006827 ORTHO05D008725 1.9e-37 160.6 156 57.1
C05p49280 Brassica napus HOM05D006827 ORTHO05D008725 8.9e-35 151.8 145 65.5
SEGI_22692 Sequoiadendron giganteum HOM05D006827 ORTHO05D008725 2.0e-34 150.6 109 64.2
Cpa.g.sc9.7 Carica papaya HOM05D001281 ORTHO05D008725 4.9e-33 146.0 171 56.7
Pp3c14_11410 Physcomitrium patens HOM05D006827 ORTHO05D008725 1.4e-32 144.4 155 46.5
Pp3c14_11414 Physcomitrium patens HOM05D006827 ORTHO05D008725 1.4e-32 144.4 155 46.5
Mapoly0005s0049 Marchantia polymorpha HOM05D006827 ORTHO05D008725 2.7e-31 140.2 154 47.4
CBR_g38487 Chara braunii HOM05D006827 ORTHO05D008725 2.9e-25 120.2 147 42.9
AUR62032776 Chenopodium quinoa HOM05D006827 ORTHO05D008725 6.4e-25 119.0 87 63.2
SMO351G0308 Selaginella moellendorffii HOM05D006827 ORTHO05D008725 1.9e-24 117.5 98 51.0
A05p32600 Brassica napus HOM05D006827 ORTHO05D008725 9.5e-21 105.1 80 71.2
BraA05t22084Z Brassica rapa HOM05D006827 ORTHO05D008725 9.5e-21 105.1 80 71.2
Psat7g189800 Pisum sativum HOM05D006827 ORTHO05D008725 1.7e-17 94.4 66 63.6
PRCOL_00004690 Prasinoderma coloniale HOM05D006827 ORTHO05D008725 2.5e-13 80.5 101 42.6
Hma1.2p1_0013F.1_g008240 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 2.1e-12 77.4 59 62.7
Zm00001eb028550 Zea mays HOM05D006608 ORTHO05D008316 1.5e-10 71.2 123 35.8
BcaB06g25810 Brassica carinata HOM05D006827 ORTHO05D023991 1.3e-09 68.2 35 85.7
Psat4g040600 Pisum sativum HOM05D006827 ORTHO05D008725 3.8e-09 66.6 126 34.1
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 3.5e-07 60.1 88 35.2
TAR633G1668 Trochodendron aralioides HOM05D006827 ORTHO05D023991 2.3e-06 57.4 33 75.8


User provided reference genes

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